You are here

Home

CAN33_51780-T1, CAN33_51780-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51780-T1
Unique NameCAN33_51780-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1028017..1030231+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51780-T1 ID=CAN33_51780-T1|Name=CAN33_51780-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2215bp|location=Sequence derived from alignment at NKJJ01000020.1:1028017..1030231+ (Aspergillus niger FDAARGOS_311)
ATGTCGCGATACCGTCGCAGAGCTCCTACTGCGCAATCCGCCGATGCCGA
TGCACAACCTCCTGTCCCAGCCCCTCCCCCGGCGTATAAAGCGCAAGCCG
ACGCCAGTGTCAATGGAGGTCCTGTTCACCCGCACTTTCAAGACTCAGAG
GGCGCCGAGATGGTGCGAATGCGAAACAAGCTTGCCAGCAAACTGGCCGC
GCGGGAGAAGCGGCAACAGGAGAAACCGGAGGATGATGAGGCAGAGCGCG
AAAGACATCGACAGAATGCGATGGATCGGCTGACAGGCGGCGAAGCGAAG
TCAGTGTCTACAACTCATTCAAAACCTGCGTCGCGCGACAGGTCAGCCGA
CAAAGCGGAGGAGCATGCGGTTCGTCGTCCCCATAAGGATTCGGAGCATC
GGAAACCCCAAACTGGATCCGCTTCGGCGAGTCGTCGCGCGAGCATGGAG
CCGAGGCGTCAGTCGGTCAGTGATGCAGCCAACCCAGCGCATCGCAGAGG
AAGTGTACATGGCGATGCCTCAGCAGTCCCTGCGAATGATACTACGGTGC
CCACTCAGTTCCCTGGAATTGATGCGCCTGTATCGGCTGTCAATGCGCGC
GAGCGGCGGGTGCTGGTCCACTACCGGAAATCATCTACGCGCATCTGCGT
TACTCCCTCCACCTCCGCTCGAGACGTCGTCGCAACTGCATTGAAGCAGA
TGGATGCCGGGGTAGACCCAGAAAAGTTCATCCTGATGGAGTCGTTCGCT
GAGCTGGGGCTAGAACGGCCCTTGCGCCGCTACGAATATGTGCGGGATGT
GCTGAATTCGTGGACTCACGACGAACAGAACACACTGATTGTTGTGCCTG
CAGCCAGCCTGGATGCGCTTACCCTGCTCGACGCGCGGAACGTGTCACTC
GGACCACCGGCGGATGTGACCTTCTACATGTACTACTCGCAGCGGCCTCG
CAAGTGGGATAAACGCTATGTGACCCTCCGGTCCGACGGCCAAGTGACGG
TCTCCAAGAAGGAGAATGCCCAAGATCCAACCAACGCTTGCCATCTTTCT
GATTTCGACATCTACTCCCCTACGGCCAGCTACCTCGCGAACAATGTCAA
GCCGCCCAAAAAGTTCTGCCAGGCTGTCAAGAGCCAGCAGAAATCCAACA
TGTTCCTCTCTACGGAGAATTTCGTCCATTTCTTCTCGACCAATGACCGC
GAGATCGCCGATGGCTGGTACCGGGCTGTCCAAACCTGGCGCAGCTGGTA
CCTGGTGACGAAGCTGGGGGCAGGCCAGCCAGCGGAAGCAGAAGCCATGC
AGCCGGACGAGACCCCATTCAAGCCCTTGCTGAACCCCTTTGAGGAGCCA
GCCAACGAGGTAAAACCGTCGCCACCCGCGCCGGAGCGGAGCAAATCCAT
GAAGACCAAGGAACTCTTCTCGCACAAAAAGAGCACCCGCGAGCGCGGGC
CTCCACCCACGTCCTTCCCCAAGCTTCTCACCGGCGATTCCGACCTCGCG
ACAGGCTCATCCTCGGATGAAGCCCCATTCTCAGCATCCGGCCTTCTCGG
CCGAACCTACACCATGCGCCAACGCGCATTGAAGGAGCGCGAAGAGCAAG
AGAAACGAGACAACGAAGAACTGATCAAACAAGGCCTGATCGGCACCATG
GGCTCCCGCCACCCCAGCCGCACCAACACCATGACATCCAGTCACGGCCC
AGACCCCAACCTCCCACGACGCACGCAATCCATGAAAAACAAACCCCTCG
TCGACCTAACCCCGTCTACCAAGAGCCCCGCAACACATCCGGAAAGGCCG
CGGCATCGCCGTCGAACCAGGCCTGCCCCTTATCGACGCCGCCACGGGGC
CCGAAGCCCCAGGCGGAATTCAAATACCCTCCGCCACCACCTGGCGACGA
CCGCAGGTGCCGCCTGAACCGCCCATGCCGGAGGTCCGCACTCGCAATCG
GTCCAACACTGCCCGCAGTGTCAACAACCAACAGCGGTACCATCATACCG
CTCCGACCACGCCAACAGACGGAGAGAATCTGCGCAGCCAAGACGGCCCG
TTCATCCCTAACAGTCTGTTGGCACGAACTACACCGCACCAAAATATACA
AGGATCTCCGGTCGGCCATGGCGTGGCAACGGGGGATCGCAATGCCGCGA
AACCGATGTTGGATATGTCGCCGGACAACCCGTTCGCAGAGGGGAGTTTG
TTACGGGGATTGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:1028017..1030231+

>CAN33_51780-T1 ID=CAN33_51780-T1|Name=CAN33_51780-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4260bp|location=Sequence derived from alignment at NKJJ01000020.1:1028017..1030231+ (Aspergillus niger FDAARGOS_311)
ATGTCGCGATACCGTCGCAGAGCTCCTACTGCGCAATCCGCCGATGCCGA
TGCACAACCTCCTGTCCCAGCCCCTCCCCCGGCGTATAAAGCGCAAGCCG
ACGCCAGTGTCAATGGAGGTCCTGTTCACCCGCACTTTCAAGACTCAGAG
GGCGCCGAGATGGTGCGAATGCGAAACAAGCTTGCCAGCAAACTGGCCGC
GCGGGAGAAGCGGCAACAGGAGAAACCGGAGGATGATGAGGCAGAGCGCG
AAAGACATCGACAGAATGCGATGGATCGGCTGACAGGCGGCGAAGCGAAG
TCAGTGTCTACAACTCATTCAAAACCTGCGTCGCGCGACAGGTCAGCCGA
CAAAGCGGAGGAGCATGCGGTTCGTCGTCCCCATAAGGATTCGGAGCATC
GGAAACCCCAAACTGGATCCGCTTCGGCGAGTCGTCGCGCGAGCATGGAG
CCGAGGCGTCAGTCGGTCAGTGATGCAGCCAACCCAGCGCATCGCAGAGG
AAGTGTACATGGCGATGCCTCAGCAGTCCCTGCGAATGATACTACGGTGC
CCACTCAGTTCCCTGGAATTGATGCGCCTGTATCGGCTGTCAATGCGCGC
GAGCGGCGGGTGCTGGTCCACTACCGGAAATCATCTACGCGCATCTGCGT
TACTCCCTCCACCTCCGCTCGAGACGTCGTCGCAACTGCATTGAAGCAGA
TGGATGCCGGGGTAGACCCAGAAAAGTTCATCCTGATGGAGTCGTTCGCT
GAGCTGGGGCTAGAACGGCCCTTGCGCCGCTACGAATATGTGCGGGATGT
GCTGAATTCGTGGACTCACGACGAACAGAACACACTGATTGTTGTGCCTG
CAGCCAGCCTGGATGCGCTTACCCTGCTCGACGCGCGGAACGTGTCACTC
GGACCACCGGCGGATGTGACCTTCTACATGTACTACTCGCAGCGGCCTCG
CAAGTGGGATAAACGCTATGTGACCCTCCGGTCCGACGGCCAAGTGACGG
TCTCCAAGAAGGAGAATGCCCAAGATCCAACCAACGCTTGCCATCTTTCT
GATTTCGACATCTACTCCCCTACGGCCAGCTACCTCGCGAACAATGTCAA
GCCGCCCAAAAAGTTCTGCCAGGCTGTCAAGAGCCAGCAGAAATCCAACA
TGTTCCTCTCTACGGAGAATTTCGTCCATTTCTTCTCGACCAATGACCGC
GAGATCGCCGATGGCTGGTACCGGGCTGTCCAAACCTGGCGCAGCTGGTA
CCTGGTGACGAAGCTGGGGGCAGGCCAGCCAGCGGAAGCAGAAGCCATGC
AGCCGGACGAGACCCCATTCAAGCCCTTGCTGAACCCCTTTGAGGAGCCA
GCCAACGAGGTAAAACCGTCGCCACCCGCGCCGGAGCGGAGCAAATCCAT
GAAGACCAAGGAACTCTTCTCGCACAAAAAGAGCACCCGCGAGCGCGGGC
CTCCACCCACGTCCTTCCCCAAGCTTCTCACCGGCGATTCCGACCTCGCG
ACAGGCTCATCCTCGGATGAAGCCCCATTCTCAGCATCCGGCCTTCTCGG
CCGAACCTACACCATGCGCCAACGCGCATTGAAGGAGCGCGAAGAGCAAG
AGAAACGAGACAACGAAGAACTGATCAAACAAGGCCTGATCGGCACCATG
GGCTCCCGCCACCCCAGCCGCACCAACACCATGACATCCACCCCGCAACA
CATCCGGAAAGGCCGCGGCATCGCCGTCGAACCAGGCCTGCCCCTTATCG
ACGCCGCCACGGGGCCCGAAGCCCCAGGCGGAATTCAAATACCCTCCGCC
ACCACCTGGCGACGACCGCAGGTGCCGCCTGAACCGCCCATGCCGGAGGT
CCGCACTCGCAATCGGTCCAACACTGCCCGCAGTGTCAACAACCAACAGC
GGTACCATCATACCGCTCCGACCACGCCAACAGACGGAGAGAATCTGCGC
AGCCAAGACGGCCCGTTCATCCCTAACAGTCTGTTGGCACGAACTACACC
GCACCAAAATATACAAGGATCTCCGGTCGGCCATGGCGTGGCAACGGGGG
ATCGCAATGCCGCGAAACCGATGTTGGATATGTCGCCGGACAACCCGTTC
GCAGAGGGGAGTTTGTTACGGGGATTGTGAATGTCGCGATACCGTCGCAG
AGCTCCTACTGCGCAATCCGCCGATGCCGATGCACAACCTCCTGTCCCAG
CCCCTCCCCCGGCGTATAAAGCGCAAGCCGACGCCAGTGTCAATGGAGGT
CCTGTTCACCCGCACTTTCAAGACTCAGAGGGCGCCGAGATGGTGCGAAT
GCGAAACAAGCTTGCCAGCAAACTGGCCGCGCGGGAGAAGCGGCAACAGG
AGAAACCGGAGGATGATGAGGCAGAGCGCGAAAGACATCGACAGAATGCG
ATGGATCGGCTGACAGGCGGCGAAGCGAAGTCAGTGTCTACAACTCATTC
AAAACCTGCGTCGCGCGACAGGTCAGCCGACAAAGCGGAGGAGCATGCGG
TTCGTCGTCCCCATAAGGATTCGGAGCATCGGAAACCCCAAACTGGATCC
GCTTCGGCGAGTCGTCGCGCGAGCATGGAGCCGAGGCGTCAGTCGGTCAG
TGATGCAGCCAACCCAGCGCATCGCAGAGGAAGTGTACATGGCGATGCCT
CAGCAGTCCCTGCGAATGATACTACGGTGCCCACTCAGTTCCCTGGAATT
GATGCGCCTGTATCGGCTGTCAATGCGCGCGAGCGGCGGGTGCTGGTCCA
CTACCGGAAATCATCTACGCGCATCTGCGTTACTCCCTCCACCTCCGCTC
GAGACGTCGTCGCAACTGCATTGAAGCAGATGGATGCCGGGGTAGACCCA
GAAAAGTTCATCCTGATGGAGTCGTTCGCTGAGCTGGGGCTAGAACGGCC
CTTGCGCCGCTACGAATATGTGCGGGATGTGCTGAATTCGTGGACTCACG
ACGAACAGAACACACTGATTGTTGTGCCTGCAGCCAGCCTGGATGCGCTT
ACCCTGCTCGACGCGCGGAACGTGTCACTCGGACCACCGGCGGATGTGAC
CTTCTACATGTACTACTCGCAGCGGCCTCGCAAGTGGGATAAACGCTATG
TGACCCTCCGGTCCGACGGCCAAGTGACGGTCTCCAAGAAGGAGAATGCC
CAAGATCCAACCAACGCTTGCCATCTTTCTGATTTCGACATCTACTCCCC
TACGGCCAGCTACCTCGCGAACAATGTCAAGCCGCCCAAAAAGTTCTGCC
AGGCTGTCAAGAGCCAGCAGAAATCCAACATGTTCCTCTCTACGGAGAAT
TTCGTCCATTTCTTCTCGACCAATGACCGCGAGATCGCCGATGGCTGGTA
CCGGGCTGTCCAAACCTGGCGCAGCTGGTACCTGGTGACGAAGCTGGGGG
CAGGCCAGCCAGCGGAAGCAGAAGCCATGCAGCCGGACGAGACCCCATTC
AAGCCCTTGCTGAACCCCTTTGAGGAGCCAGCCAACGAGGTAAAACCGTC
GCCACCCGCGCCGGAGCGGAGCAAATCCATGAAGACCAAGGAACTCTTCT
CGCACAAAAAGAGCACCCGCGAGCGCGGGCCTCCACCCACGTCCTTCCCC
AAGCTTCTCACCGGCGATTCCGACCTCGCGACAGGCTCATCCTCGGATGA
AGCCCCATTCTCAGCATCCGGCCTTCTCGGCCGAACCTACACCATGCGCC
AACGCGCATTGAAGGAGCGCGAAGAGCAAGAGAAACGAGACAACGAAGAA
CTGATCAAACAAGGCCTGATCGGCACCATGGGCTCCCGCCACCCCAGCCG
CACCAACACCATGACATCCACCCCGCAACACATCCGGAAAGGCCGCGGCA
TCGCCGTCGAACCAGGCCTGCCCCTTATCGACGCCGCCACGGGGCCCGAA
GCCCCAGGCGGAATTCAAATACCCTCCGCCACCACCTGGCGACGACCGCA
GGTGCCGCCTGAACCGCCCATGCCGGAGGTCCGCACTCGCAATCGGTCCA
ACACTGCCCGCAGTGTCAACAACCAACAGCGGTACCATCATACCGCTCCG
ACCACGCCAACAGACGGAGAGAATCTGCGCAGCCAAGACGGCCCGTTCAT
CCCTAACAGTCTGTTGGCACGAACTACACCGCACCAAAATATACAAGGAT
CTCCGGTCGGCCATGGCGTGGCAACGGGGGATCGCAATGCCGCGAAACCG
ATGTTGGATATGTCGCCGGACAACCCGTTCGCAGAGGGGAGTTTGTTACG
GGGATTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_51780CAN33_51780Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51780-T1.exon1CAN33_51780-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_51780-T1.exon2CAN33_51780-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51780-T1.cdsCAN33_51780-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51780-T1CAN33_51780-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR001849
DBxrefInterPro:IPR011993
DBxrefInterPro:IPR000159
DBxrefPFAM:PF00788
DBxrefPFAM:PF00169
ProductRas association (RalGDS/AF-6) domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1028017..1030231 +
Powered by Drupal