|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1077520..1078626+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_51850-T1 ID=CAN33_51850-T1|Name=CAN33_51850-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1107bp|location=Sequence derived from alignment at NKJJ01000020.1:1077520..1078626+ (Aspergillus niger FDAARGOS_311)
ATGTCCACCACTGCCCGTGCCGATTTCGAGGCCGTCTTCCCCTCTTTGCG
GGAAGACCTTCTGAACTATGCGAAGCAGTACAAGCTGCCCCAGAACGCTC
TCGAGTGGTTCGAGAAGGTATGTGCCGACCTCCCTAAGTTTTCGCCCCCA
AAGTCAATCTCTAATCCTTATTTCTCTTCAATAGGCCCTCAATGTCAACG
TCCCCGGTGGAAAGCTCAACCGTGGTCTCTCCGTCCCCGACACCGGTCTC
GCTCTCCTGAAGAAGCCCCTGACCGATGAGCAATTCAAGCACCTCAGTCT
GCTGGGCTGGCTCACCGAGCTGCTTCAGGCCTTCTTCCTGGTCAGCGACG
ACATCATGGACGGCTCCATCACCCGTCGCGGCCAGCCCTGCTGGTACAAG
CACGAAGGAGTCGGACTGATCGCTATCAACGACGCCTTCCTGCTCGAGTC
TGGCATCTACATTATCCTGAAGAAGTACTTCCGCTCTCACCCCGCCTACA
TCGACCTCGTCGAGCTCTTCCACGAGACCACCTACCAGACCGAGCTGGGC
CAGCTGTGTGACCTGATCACCGCCCCCGAGGACAACGTCAACCTCGACAA
CTTCTCCATGGAGAAGTACATGTTCATCGTCACCTACAAGACCGCCTACT
ACAGCTTCTACCTCCCCGTTGCTCTGGCCCTGCACTACCTCCAGCTCGCT
ACCCCCGAGAACCTGCGTCAGGCCCACGACATCCTCATCCCCTGGGTCAG
TACTTCCAGGTCCAGGATGACTACCTTGATGCCTACGGTGACCCCGCCTT
CATTGGCAAGATTGGTACCGATATCCAGGATAACAAGTGCTCGTGGTTGG
TCAACCAGGCTCTGCAGCGTTGCAACGCTGAGCAGCGCAAGGTCCTTGAC
ACTGCTTACGGTCGTAAGGACGCTGAGCTGGAGGCCAAGGTCAAGGCCCT
GTACAAGGAGCTCGACTTGGAGAAGATCTACAAGGAATACGAGGAGAGCG
TTGTTGGTGAAATCCGCACCAAGATCAACAGCATCAACGAGTCGGAGGGT
CTGAAGAAGGAGGTCTTCGAGGCCTTCCTCGCGAAGATCTACAAGCGCAC
TAAATAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1077520..1078626+ >CAN33_51850-T1 ID=CAN33_51850-T1|Name=CAN33_51850-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3060bp|location=Sequence derived from alignment at NKJJ01000020.1:1077520..1078626+ (Aspergillus niger FDAARGOS_311)
ATGTCCACCACTGCCCGTGCCGATTTCGAGGCCGTCTTCCCCTCTTTGCG
GGAAGACCTTCTGAACTATGCGAAGCAGTACAAGCTGCCCCAGAACGCTC
TCGAGTGGTTCGAGAAGGCCCTCAATGTCAACGTCCCCGGTGGAAAGCTC
AACCGTGGTCTCTCCGTCCCCGACACCGGTCTCGCTCTCCTGAAGAAGCC
CCTGACCGATGAGCAATTCAAGCACCTCAGTCTGCTGGGCTGGCTCACCG
AGCTGCTTCAGGCCTTCTTCCTGGTCAGCGACGACATCATGGACGGCTCC
ATCACCCGTCGCGGCCAGCCCTGCTGGTACAAGCACGAAGGAGTCGGACT
GATCGCTATCAACGACGCCTTCCTGCTCGAGTCTGGCATCTACATTATCC
TGAAGAAGTACTTCCGCTCTCACCCCGCCTACATCGACCTCGTCGAGCTC
TTCCACGAGACCACCTACCAGACCGAGCTGGGCCAGCTGTGTGACCTGAT
CACCGCCCCCGAGGACAACGTCAACCTCGACAACTTCTCCATGGAGAAGT
ACATGTTCATCGTCACCTACAAGACCGCCTACTACAGCTTCTACCTCCCC
GTTGCTCTGGCCCTGCACTACCTCCAGCTCGCTACCCCCGAGAACCTGCG
TCAGGCCCACGACATCCTCATCCCCTGGGATGACTACCTTGATGCCTACG
GTGACCCCGCCTTCATTGGCAAGATTGGTACCGATATCCAGGATAACAAG
TGCTCGTGGTTGGTCAACCAGGCTCTGCAGCGTTGCAACGCTGAGCAGCG
CAAGGTCCTTGACACTGCTTACGGTCGTAAGGACGCTGAGCTGGAGGCCA
AGGTCAAGGCCCTGTACAAGGAGCTCGACTTGGAGAAGATCTACAAGGAA
TACGAGGAGAGCGTTGTTGGTGAAATCCGCACCAAGATCAACAGCATCAA
CGAGTCGGAGGGTCTGAAGAAGGAGGTCTTCGAGGCCTTCCTCGCGAAGA
TCTACAAGCGCACTAAATAAATGTCCACCACTGCCCGTGCCGATTTCGAG
GCCGTCTTCCCCTCTTTGCGGGAAGACCTTCTGAACTATGCGAAGCAGTA
CAAGCTGCCCCAGAACGCTCTCGAGTGGTTCGAGAAGGCCCTCAATGTCA
ACGTCCCCGGTGGAAAGCTCAACCGTGGTCTCTCCGTCCCCGACACCGGT
CTCGCTCTCCTGAAGAAGCCCCTGACCGATGAGCAATTCAAGCACCTCAG
TCTGCTGGGCTGGCTCACCGAGCTGCTTCAGGCCTTCTTCCTGGTCAGCG
ACGACATCATGGACGGCTCCATCACCCGTCGCGGCCAGCCCTGCTGGTAC
AAGCACGAAGGAGTCGGACTGATCGCTATCAACGACGCCTTCCTGCTCGA
GTCTGGCATCTACATTATCCTGAAGAAGTACTTCCGCTCTCACCCCGCCT
ACATCGACCTCGTCGAGCTCTTCCACGAGACCACCTACCAGACCGAGCTG
GGCCAGCTGTGTGACCTGATCACCGCCCCCGAGGACAACGTCAACCTCGA
CAACTTCTCCATGGAGAAGTACATGTTCATCGTCACCTACAAGACCGCCT
ACTACAGCTTCTACCTCCCCGTTGCTCTGGCCCTGCACTACCTCCAGCTC
GCTACCCCCGAGAACCTGCGTCAGGCCCACGACATCCTCATCCCCTGGGA
TGACTACCTTGATGCCTACGGTGACCCCGCCTTCATTGGCAAGATTGGTA
CCGATATCCAGGATAACAAGTGCTCGTGGTTGGTCAACCAGGCTCTGCAG
CGTTGCAACGCTGAGCAGCGCAAGGTCCTTGACACTGCTTACGGTCGTAA
GGACGCTGAGCTGGAGGCCAAGGTCAAGGCCCTGTACAAGGAGCTCGACT
TGGAGAAGATCTACAAGGAATACGAGGAGAGCGTTGTTGGTGAAATCCGC
ACCAAGATCAACAGCATCAACGAGTCGGAGGGTCTGAAGAAGGAGGTCTT
CGAGGCCTTCCTCGCGAAGATCTACAAGCGCACTAAATAAATGTCCACCA
CTGCCCGTGCCGATTTCGAGGCCGTCTTCCCCTCTTTGCGGGAAGACCTT
CTGAACTATGCGAAGCAGTACAAGCTGCCCCAGAACGCTCTCGAGTGGTT
CGAGAAGGCCCTCAATGTCAACGTCCCCGGTGGAAAGCTCAACCGTGGTC
TCTCCGTCCCCGACACCGGTCTCGCTCTCCTGAAGAAGCCCCTGACCGAT
GAGCAATTCAAGCACCTCAGTCTGCTGGGCTGGCTCACCGAGCTGCTTCA
GGCCTTCTTCCTGGTCAGCGACGACATCATGGACGGCTCCATCACCCGTC
GCGGCCAGCCCTGCTGGTACAAGCACGAAGGAGTCGGACTGATCGCTATC
AACGACGCCTTCCTGCTCGAGTCTGGCATCTACATTATCCTGAAGAAGTA
CTTCCGCTCTCACCCCGCCTACATCGACCTCGTCGAGCTCTTCCACGAGA
CCACCTACCAGACCGAGCTGGGCCAGCTGTGTGACCTGATCACCGCCCCC
GAGGACAACGTCAACCTCGACAACTTCTCCATGGAGAAGTACATGTTCAT
CGTCACCTACAAGACCGCCTACTACAGCTTCTACCTCCCCGTTGCTCTGG
CCCTGCACTACCTCCAGCTCGCTACCCCCGAGAACCTGCGTCAGGCCCAC
GACATCCTCATCCCCTGGGATGACTACCTTGATGCCTACGGTGACCCCGC
CTTCATTGGCAAGATTGGTACCGATATCCAGGATAACAAGTGCTCGTGGT
TGGTCAACCAGGCTCTGCAGCGTTGCAACGCTGAGCAGCGCAAGGTCCTT
GACACTGCTTACGGTCGTAAGGACGCTGAGCTGGAGGCCAAGGTCAAGGC
CCTGTACAAGGAGCTCGACTTGGAGAAGATCTACAAGGAATACGAGGAGA
GCGTTGTTGGTGAAATCCGCACCAAGATCAACAGCATCAACGAGTCGGAG
GGTCTGAAGAAGGAGGTCTTCGAGGCCTTCCTCGCGAAGATCTACAAGCG
CACTAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092633US |
| DBxref | InterPro:IPR033749 |
| DBxref | InterPro:IPR008949 |
| DBxref | InterPro:IPR000092 |
| DBxref | PFAM:PF00348 |
| Product | Polyprenyl synthetase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1077520..1078626 + |
|
