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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1093531..1096482- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_51885-T1 ID=CAN33_51885-T1|Name=CAN33_51885-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2952bp|location=Sequence derived from alignment at NKJJ01000020.1:1093531..1096482- (Aspergillus niger FDAARGOS_311)
ATGTCCTCCGCGACCCCCCGGAAGTCCATTGACAGCTTGGCTTCAGGCGC
ATCGACTCCCTCCTTGTCTCAATTCTCGCTAAATCAGATCGAATCCCCGC
GGGCGTCGACTCAGAGGTACCCTCTCAGGAGAGGGTCGACTGCCAGCTCG
ATTGCCAGTATCGGAGGGATTTTGGATCCTTCCCACCGTCACGGATCGAT
AGCTGAGTCCGGGCAAAATGGTACGGCCTATGGGAGTGTGAGAGAATCCA
TGAAGGAAATTGCATGCTAATTCGGCGCAGCCATCTCTACTCTCCTGCAA
CCTCCCATTGTCCGCACCGGCCTAGTTCCCCATACCGCAGTCCCCTCCGC
CGGATACAAGCCCCCAACTACTCGCGATATACCTCCTGTCACATTGACCA
ACATTCCACATGTGGATCCCAAAGCGTTCGAAGCCTACTTGTCGCAGGTT
GGGTCGTTGTACGATGTCTTCCAACAAGCAAAGGAAAGCGCCGGTGATCA
GGAGTCGCAGCTAGCGCGGGGTAGCGACAAGTCTTCACCCAAGGCAGAGG
ACTCTGATTCATTGGCCCCAAGGTCCAGGGAGAGGCGACCATCGGCCATT
TCAACCAGTTCAAGAGCAACTTCTCCGTACGATACCCGGGGTCGAAAACG
GTCGTTTGCCGGTCCCGGTCGCGGTCGCGGTCATGCTATTACACCACTAT
CTACCATTCCGACGGTCTACTTCGAGGACGACTTCCACCTAGAGAACCCG
CGCACATTCGATGTTGTTTCGGAGAAATCAGAGATCGTTACACCATCAAA
GGATAAGTCAGAGAATGGTGCTGCTCTGGAACCGGCTCCTACGGGTAGAA
AGGCTCTGGCTACGAATGCCATTCTACAAGAGAAGCTTTCATGGTACATG
GACACTGTGGAAATTCACCTTATCTCTTCGATCTCGACGGCGTCTAAATC
TTTCTTCACCGCGCTAGGGTCACTACGGGAGCTGCATGCAGAAGCTGCCG
ACTCGGTCAAGCGGATTCAGGTTCTGCGGAAGGACCTGCAGAAAATTGAC
CGTGAGATGGCCCTTGGTGGACTCAAGATTGTGAATCTGCGACGGAGGAG
AGAAAATGTCCGTATGCTTGCTGATGCAGTATCGCAACTCCGTGACGTCG
TTCAGTCGGTTTCCCGATGCGAGGAACTAGTCGAGACCGGCAAGATCGAG
GAGGCTGCAGATGGCTTAGAAGAGGTGGAACGGCTCATGGCCGGAGAGTA
TACTCCTGGCTCTTCCGAGGGCAACGAGAAACAAGAACAATCGAGAAAAG
CCATCGATTTGCGCAAGCTCAAGGCCCTGGAAGGCGCTTCTGACGACCTG
GCGCATCTGAGATACCGCATTGGCACAGGATATGAGAGCCGTTTCTTGAG
CGACCTGCTGGGAGATCTGAGGCAGCATGTCGAAACCGTGCCTTTGGATA
CAACATTACAACGATGGGGCTCTGCGTTCCTGCGACAGCGGGGAGGACAG
CGCACAGGGGCTACACAAGCCCCAGCATATATGGCCTTCGATGACCAATT
ACGGTCCCGGCTGCACCTGCATCTCACAGGGCTTGCTCGCGTGCGTCATA
CGACTCCTGCAGCGACCGCTTTCAAGACTGCGGTTTTGCGAGAGATGAAG
AGTCTGATTCGCAAACACATGCCCAGCTCGAGTGATGACGATAACGAATC
AGTGGTATCTGTATCCACACAAAAGTCCCAGCAGCTCAGCCAGCAGGAAA
AATCTTCAATTCTTGCGCGTAACCTCAGGGCTTTGGATGCCCAAGACTCA
TACAACATGCTTGCTCGCGTATACACGGGTATCAGTGAGTCGTTGCGGAG
ACTCAGTGTTCAAGTCAAGGTTCTTCTGGATATTGCCAGTGGGTTGGAAA
ACCCGGCCGCCATTGGTGTGAAGTCCGGCCCACCAAGCCCTAATCCTCAG
GGTCCAGGCAAACCTGCAACCCCGGGCCCTGTAGCCGTTGTGGCACAGGA
CGAGATTCTGCAGGTCCTGGATATGTCCAGCCTTCTTGGCCAAGCCGTCG
ATATTGCGCAATCCCAGGTCACCAAGGTTTTGAAGGTTCGGTCTGAACAG
ACATCTCAGCTACCAAAGGATGAATTCTTGAAGTACTTCACCCTCAATCG
GCTCTTCGCTGATGAGTGCGAAGCCATCTCCGGGCGTAGCGGTACCGCCT
TGAAGACTGTTGTAGGCAACCAAATCAAAGATTACATCAACCGGTTTGGA
GACGGGCAGCGACGCCGTGTGGTCGAGGTAATGGACGCGGATCGATGGGA
TGCAAGGGACTTTGGAGAAGCCGACAATGCTATTCTTGATCGCATCCTTG
GCGCTAGTACTAGAGATATTGATGTCTGGGTCGACGCATCCAAGATTTGG
CTGCCCGAGAACGAACGCCAACAACCCTCTCCGGCTAGCACAACAACTGT
CAACGGGTCCGGAAAAGAGAAGACGCGCAGTGCCGTGATCGATGAGCAGA
AGTACATTTTGTCCGAGTCTGCTGTTGCAATGATGAAAAGCATCGAGGAA
TATCAATATCTCATGGCAAATATACCCAGCATGATGCAAGACATTGCGCC
TGGTTTGTTAGAGTCACTAAAGCTGTTCAACTCCCGATCTTCTCAGTTGA
TCCTGGGCGCAGGGGCTACTAGAAGCGCAGGTCTCAAGAACATCACCACC
AAGCACTTGGCTCTGTCATCTCAAGCGCTCAGTTTCATCATTGCCTTGGT
TCCCTATATCCGAGAGTTCGTCCGCCGCCATGCACCTTCTAGCCCACTGA
TGGGCGAGTTCGACAAGGTGAAGCGGCTGTATCAGGAACACCAGTCCGGT
ATTCACGAGAAACTCGTCGATATTATGGGATCTCGATCAGCCATCCATGT
CAATGCTATGAAGAAGATTGACTGGAACGCGCCCGCAGGGGCAGTGCTGT
GA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1093531..1096482- >CAN33_51885-T1 ID=CAN33_51885-T1|Name=CAN33_51885-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5784bp|location=Sequence derived from alignment at NKJJ01000020.1:1093531..1096482- (Aspergillus niger FDAARGOS_311)
CCATCTCTACTCTCCTGCAACCTCCCATTGTCCGCACCGGCCTAGTTCCC
CATACCGCAGTCCCCTCCGCCGGATACAAGCCCCCAACTACTCGCGATAT
ACCTCCTGTCACATTGACCAACATTCCACATGTGGATCCCAAAGCGTTCG
AAGCCTACTTGTCGCAGGTTGGGTCGTTGTACGATGTCTTCCAACAAGCA
AAGGAAAGCGCCGGTGATCAGGAGTCGCAGCTAGCGCGGGGTAGCGACAA
GTCTTCACCCAAGGCAGAGGACTCTGATTCATTGGCCCCAAGGTCCAGGG
AGAGGCGACCATCGGCCATTTCAACCAGTTCAAGAGCAACTTCTCCGTAC
GATACCCGGGGTCGAAAACGGTCGTTTGCCGGTCCCGGTCGCGGTCGCGG
TCATGCTATTACACCACTATCTACCATTCCGACGGTCTACTTCGAGGACG
ACTTCCACCTAGAGAACCCGCGCACATTCGATGTTGTTTCGGAGAAATCA
GAGATCGTTACACCATCAAAGGATAAGTCAGAGAATGGTGCTGCTCTGGA
ACCGGCTCCTACGGGTAGAAAGGCTCTGGCTACGAATGCCATTCTACAAG
AGAAGCTTTCATGGTACATGGACACTGTGGAAATTCACCTTATCTCTTCG
ATCTCGACGGCGTCTAAATCTTTCTTCACCGCGCTAGGGTCACTACGGGA
GCTGCATGCAGAAGCTGCCGACTCGGTCAAGCGGATTCAGGTTCTGCGGA
AGGACCTGCAGAAAATTGACCGTGAGATGGCCCTTGGTGGACTCAAGATT
GTGAATCTGCGACGGAGGAGAGAAAATGTCCGTATGCTTGCTGATGCAGT
ATCGCAACTCCGTGACGTCGTTCAGTCGGTTTCCCGATGCGAGGAACTAG
TCGAGACCGGCAAGATCGAGGAGGCTGCAGATGGCTTAGAAGAGGTGGAA
CGGCTCATGGCCGGAGAGTATACTCCTGGCTCTTCCGAGGGCAACGAGAA
ACAAGAACAATCGAGAAAAGCCATCGATTTGCGCAAGCTCAAGGCCCTGG
AAGGCGCTTCTGACGACCTGGCGCATCTGAGATACCGCATTGGCACAGGA
TATGAGAGCCGTTTCTTGAGCGACCTGCTGGGAGATCTGAGGCAGCATGT
CGAAACCGTGCCTTTGGATACAACATTACAACGATGGGGCTCTGCGTTCC
TGCGACAGCGGGGAGGACAGCGCACAGGGGCTACACAAGCCCCAGCATAT
ATGGCCTTCGATGACCAATTACGGTCCCGGCTGCACCTGCATCTCACAGG
GCTTGCTCGCGTGCGTCATACGACTCCTGCAGCGACCGCTTTCAAGACTG
CGGTTTTGCGAGAGATGAAGAGTCTGATTCGCAAACACATGCCCAGCTCG
AGTGATGACGATAACGAATCAGTGGTATCTGTATCCACACAAAAGTCCCA
GCAGCTCAGCCAGCAGGAAAAATCTTCAATTCTTGCGCGTAACCTCAGGG
CTTTGGATGCCCAAGACTCATACAACATGCTTGCTCGCGTATACACGGGT
ATCAGTGAGTCGTTGCGGAGACTCAGTGTTCAAGTCAAGGTTCTTCTGGA
TATTGCCAGTGGGTTGGAAAACCCGGCCGCCATTGGTGTGAAGTCCGGCC
CACCAAGCCCTAATCCTCAGGGTCCAGGCAAACCTGCAACCCCGGGCCCT
GTAGCCGTTGTGGCACAGGACGAGATTCTGCAGGTCCTGGATATGTCCAG
CCTTCTTGGCCAAGCCGTCGATATTGCGCAATCCCAGGTCACCAAGGTTT
TGAAGGTTCGGTCTGAACAGACATCTCAGCTACCAAAGGATGAATTCTTG
AAGTACTTCACCCTCAATCGGCTCTTCGCTGATGAGTGCGAAGCCATCTC
CGGGCGTAGCGGTACCGCCTTGAAGACTGTTGTAGGCAACCAAATCAAAG
ATTACATCAACCGGTTTGGAGACGGGCAGCGACGCCGTGTGGTCGAGGTA
ATGGACGCGGATCGATGGGATGCAAGGGACTTTGGAGAAGCCGACAATGC
TATTCTTGATCGCATCCTTGGCGCTAGTACTAGAGATATTGATGTCTGGG
TCGACGCATCCAAGATTTGGCTGCCCGAGAACGAACGCCAACAACCCTCT
CCGGCTAGCACAACAACTGTCAACGGGTCCGGAAAAGAGAAGACGCGCAG
TGCCGTGATCGATGAGCAGAAGTACATTTTGTCCGAGTCTGCTGTTGCAA
TGATGAAAAGCATCGAGGAATATCAATATCTCATGGCAAATATACCCAGC
ATGATGCAAGACATTGCGCCTGGTTTGTTAGAGTCACTAAAGCTGTTCAA
CTCCCGATCTTCTCAGTTGATCCTGGGCGCAGGGGCTACTAGAAGCGCAG
GTCTCAAGAACATCACCACCAAGCACTTGGCTCTGTCATCTCAAGCGCTC
AGTTTCATCATTGCCTTGGTTCCCTATATCCGAGAGTTCGTCCGCCGCCA
TGCACCTTCTAGCCCACTGATGGGCGAGTTCGACAAGGTGAAGCGGCTGT
ATCAGGAACACCAGTCCGGTATTCACGAGAAACTCGTCGATATTATGGGA
TCTCGATCAGCCATCCATGTCAATGCTATGAAGAAGATTGACTGGAACGC
GCCCGCAGGGGCAGTGCTGTGAATGTCCTCCGCGACCCCCCGGAAGTCCA
TTGACAGCTTGGCTTCAGGCGCATCGACTCCCTCCTTGTCTCAATTCTCG
CTAAATCAGATCGAATCCCCGCGGGCGTCGACTCAGAGGTACCCTCTCAG
GAGAGGGTCGACTGCCAGCTCGATTGCCAGTATCGGAGGGATTTTGGATC
CTTCCCACCGTCACGGATCGATAGCTGAGTCCGGGCAAAATGCCATCTCT
ACTCTCCTGCAACCTCCCATTGTCCGCACCGGCCTAGTTCCCCATACCGC
AGTCCCCTCCGCCGGATACAAGCCCCCAACTACTCGCGATATACCTCCTG
TCACATTGACCAACATTCCACATGTGGATCCCAAAGCGTTCGAAGCCTAC
TTGTCGCAGGTTGGGTCGTTGTACGATGTCTTCCAACAAGCAAAGGAAAG
CGCCGGTGATCAGGAGTCGCAGCTAGCGCGGGGTAGCGACAAGTCTTCAC
CCAAGGCAGAGGACTCTGATTCATTGGCCCCAAGGTCCAGGGAGAGGCGA
CCATCGGCCATTTCAACCAGTTCAAGAGCAACTTCTCCGTACGATACCCG
GGGTCGAAAACGGTCGTTTGCCGGTCCCGGTCGCGGTCGCGGTCATGCTA
TTACACCACTATCTACCATTCCGACGGTCTACTTCGAGGACGACTTCCAC
CTAGAGAACCCGCGCACATTCGATGTTGTTTCGGAGAAATCAGAGATCGT
TACACCATCAAAGGATAAGTCAGAGAATGGTGCTGCTCTGGAACCGGCTC
CTACGGGTAGAAAGGCTCTGGCTACGAATGCCATTCTACAAGAGAAGCTT
TCATGGTACATGGACACTGTGGAAATTCACCTTATCTCTTCGATCTCGAC
GGCGTCTAAATCTTTCTTCACCGCGCTAGGGTCACTACGGGAGCTGCATG
CAGAAGCTGCCGACTCGGTCAAGCGGATTCAGGTTCTGCGGAAGGACCTG
CAGAAAATTGACCGTGAGATGGCCCTTGGTGGACTCAAGATTGTGAATCT
GCGACGGAGGAGAGAAAATGTCCGTATGCTTGCTGATGCAGTATCGCAAC
TCCGTGACGTCGTTCAGTCGGTTTCCCGATGCGAGGAACTAGTCGAGACC
GGCAAGATCGAGGAGGCTGCAGATGGCTTAGAAGAGGTGGAACGGCTCAT
GGCCGGAGAGTATACTCCTGGCTCTTCCGAGGGCAACGAGAAACAAGAAC
AATCGAGAAAAGCCATCGATTTGCGCAAGCTCAAGGCCCTGGAAGGCGCT
TCTGACGACCTGGCGCATCTGAGATACCGCATTGGCACAGGATATGAGAG
CCGTTTCTTGAGCGACCTGCTGGGAGATCTGAGGCAGCATGTCGAAACCG
TGCCTTTGGATACAACATTACAACGATGGGGCTCTGCGTTCCTGCGACAG
CGGGGAGGACAGCGCACAGGGGCTACACAAGCCCCAGCATATATGGCCTT
CGATGACCAATTACGGTCCCGGCTGCACCTGCATCTCACAGGGCTTGCTC
GCGTGCGTCATACGACTCCTGCAGCGACCGCTTTCAAGACTGCGGTTTTG
CGAGAGATGAAGAGTCTGATTCGCAAACACATGCCCAGCTCGAGTGATGA
CGATAACGAATCAGTGGTATCTGTATCCACACAAAAGTCCCAGCAGCTCA
GCCAGCAGGAAAAATCTTCAATTCTTGCGCGTAACCTCAGGGCTTTGGAT
GCCCAAGACTCATACAACATGCTTGCTCGCGTATACACGGGTATCAGTGA
GTCGTTGCGGAGACTCAGTGTTCAAGTCAAGGTTCTTCTGGATATTGCCA
GTGGGTTGGAAAACCCGGCCGCCATTGGTGTGAAGTCCGGCCCACCAAGC
CCTAATCCTCAGGGTCCAGGCAAACCTGCAACCCCGGGCCCTGTAGCCGT
TGTGGCACAGGACGAGATTCTGCAGGTCCTGGATATGTCCAGCCTTCTTG
GCCAAGCCGTCGATATTGCGCAATCCCAGGTCACCAAGGTTTTGAAGGTT
CGGTCTGAACAGACATCTCAGCTACCAAAGGATGAATTCTTGAAGTACTT
CACCCTCAATCGGCTCTTCGCTGATGAGTGCGAAGCCATCTCCGGGCGTA
GCGGTACCGCCTTGAAGACTGTTGTAGGCAACCAAATCAAAGATTACATC
AACCGGTTTGGAGACGGGCAGCGACGCCGTGTGGTCGAGGTAATGGACGC
GGATCGATGGGATGCAAGGGACTTTGGAGAAGCCGACAATGCTATTCTTG
ATCGCATCCTTGGCGCTAGTACTAGAGATATTGATGTCTGGGTCGACGCA
TCCAAGATTTGGCTGCCCGAGAACGAACGCCAACAACCCTCTCCGGCTAG
CACAACAACTGTCAACGGGTCCGGAAAAGAGAAGACGCGCAGTGCCGTGA
TCGATGAGCAGAAGTACATTTTGTCCGAGTCTGCTGTTGCAATGATGAAA
AGCATCGAGGAATATCAATATCTCATGGCAAATATACCCAGCATGATGCA
AGACATTGCGCCTGGTTTGTTAGAGTCACTAAAGCTGTTCAACTCCCGAT
CTTCTCAGTTGATCCTGGGCGCAGGGGCTACTAGAAGCGCAGGTCTCAAG
AACATCACCACCAAGCACTTGGCTCTGTCATCTCAAGCGCTCAGTTTCAT
CATTGCCTTGGTTCCCTATATCCGAGAGTTCGTCCGCCGCCATGCACCTT
CTAGCCCACTGATGGGCGAGTTCGACAAGGTGAAGCGGCTGTATCAGGAA
CACCAGTCCGGTATTCACGAGAAACTCGTCGATATTATGGGATCTCGATC
AGCCATCCATGTCAATGCTATGAAGAAGATTGACTGGAACGCGCCCGCAG
GGGCAGTGCTGTGAATGTCCTCCGCGACCCCCCGGAAGTCCATTGACAGC
TTGGCTTCAGGCGCATCGACTCCCTCCTTGTCTCAATTCTCGCTAAATCA
GATCGAATCCCCGCGGGCGTCGACTCAGAGGTACCCTCTCAGGAGAGGGT
CGACTGCCAGCTCGATTGCCAGTATCGGAGGGATTTTGGATCCTTCCCAC
CGTCACGGATCGATAGCTGAGTCCGGGCAAAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042147 | retrograde transport, endosome to Golgi |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260WCZ |
| DBxref | InterPro:IPR012501 |
| DBxref | PFAM:PF07928 |
| Product | Vps54-like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1093531..1096482 - |
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