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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1099722..1101272- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_51895-T1 ID=CAN33_51895-T1|Name=CAN33_51895-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1551bp|location=Sequence derived from alignment at NKJJ01000020.1:1099722..1101272- (Aspergillus niger FDAARGOS_311)
ATGATTGTGTCATCTGGCAGCAATCAAAATGCCCCAGATGGTAAGATGGA
ACGCCTAGATGGGAGTTTGATCCGGAAGAAGTATTCCAAGCAGTAGCTTG
ACGCTACGGGTTCATAGTCTGGGCGCAGAACTGCAGTAACAACTAAGGTT
CTGCCAGAATTCGATCGTAAATGCGTTTCGGACCCATATTTCGTACCGTT
GGCTCTTCATATAAAGCCCAAAGTCCAGACACCCTCGGCATCTGTAGTGT
TCGATTACTGACAAGACATCTCGTCATCACGCTGCATCAATGCCGTGTCA
AACGACGTAAATATCATCGAGGTGAGTCAGACGTAGGCCTCATCCATCAC
AGTCACCCATCCGCTCTTGTCATGGAACCATATACTCTGCCACTTCCACA
ATAGCCATCATAAGTTCCTCGACAAAAGGCAACCTCACATTTTCTTATCG
GATCTGTAAGACGCTGCCTAATATCATATACTCACATTATTGGTCATATC
CTTTCGGCCAGAAAGAGTTCTAGTCTAGTTGTTTCCAGAGGGATATAGTC
ATGGAGGTTGAGAACCCCAGAGCGGTGACCCCGATAAGTTGGGGTCAGAG
ATCTCCTCAAAATATCAGGAGCAGAGGGCATAAACTTTCCTTTAGGAAAG
ACAAAGCACAGAGGGCAGAAGGTGACGTTCGAGGTTCTCGCGTGGTCGAT
AGGGTTCCTTCCCTTGATCGAGTCGAGTCCGAAAACGTCAGCCAGAGAAA
CCGAGATTCCCAAACTGCTCCTGTCTTCGATAGACAGAAGCGCAGAAGTG
CTAGCAGTAGTACTACTACTAGTAGTGCTAGTAGCAGAACGATCCCCAGT
GGAGATTCCAAAATCCAGGATGCTGCTTCTGTTTCTGGACCGACCGAGTC
CGTCGTGACGAGGAAGTCGAACAAGCGTGGGGTGAGGAAGCAGCATCCTG
GGAATCAAAAAAAGAAACAGAAGCAGCAGCAGCAGCAACTGCTGCCTCCA
CCTATCATCCGAATTCAGGATGATAGATTTGACAGAGTGTTGCTGATCAA
GCCTCGTCAAGAGGCTTTGAACTATGCCAAGGGGGTGACAGAGACGTCCC
CAGATGACTATCACGTCTTCTGGGTGGACGGATCGACAGCTGCCAACGAG
GCAGCGCCTTCTGGAGTTGCAGTCATCCACGGGCACAGCGGACGAGACGC
TGACGAGCTGTACTGCGTCGACGAGATCCGGCTCAGCCAGTTGGCTGAGT
TGTTTGCCATTGGGGCCGGACTGAGAGCCGCAGTTCGCCAATTGGGGCGG
CTTCAAGTATCAGGCCATGTCGTCCAGTTCTTCACGGACTGCCAAGCGGC
CATGGAAATGCTCCGGCCTGGGGCAAAAAGGTTGAGCCCACTCGCTGGCC
GTCTGGTGCGTCTTGTTGACGCTCTCTCTCACCGACTCTGCTCGATGGGA
GTCAAGGTCGAGCTTCATTGGGTTCCGGGACACCAGTGTGTTCTGGGCCA
TAAGCGAGCTGATTTATTGTCTAGGGTAATCACAAAATTTTTGATGAATA
A back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1099722..1101272- >CAN33_51895-T1 ID=CAN33_51895-T1|Name=CAN33_51895-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1431bp|location=Sequence derived from alignment at NKJJ01000020.1:1099722..1101272- (Aspergillus niger FDAARGOS_311)
GGTAATCACAAAATTTTTGATGAATAAAGGCTTTGAACTATGCCAAGGGG
GTGACAGAGACGTCCCCAGATGACTATCACGTCTTCTGGGTGGACGGATC
GACAGCTGCCAACGAGGCAGCGCCTTCTGGAGTTGCAGTCATCCACGGGC
ACAGCGGACGAGACGCTGACGAGCTGTACTGCGTCGACGAGATCCGGCTC
AGCCAGTTGGCTGAGTTGTTTGCCATTGGGGCCGGACTGAGAGCCGCAGT
TCGCCAATTGGGGCGGCTTCAAGTATCAGGCCATGTCGTCCAGTTCTTCA
CGGACTGCCAAGCGGCCATGGAAATGCTCCGGCCTGGGGCAAAAAGGTTG
AGCCCACTCGCTGGCCGTCTGGTGCGTCTTGTTGACGCTCTCTCTCACCG
ACTCTGCTCGATGGGAGTCAAGGTCGAGCTTCATTGGATGATTGTGTCAT
CTGGCAGCAATCAAAATGCCCCAGATGGGTAATCACAAAATTTTTGATGA
ATAAAGGCTTTGAACTATGCCAAGGGGGTGACAGAGACGTCCCCAGATGA
CTATCACGTCTTCTGGGTGGACGGATCGACAGCTGCCAACGAGGCAGCGC
CTTCTGGAGTTGCAGTCATCCACGGGCACAGCGGACGAGACGCTGACGAG
CTGTACTGCGTCGACGAGATCCGGCTCAGCCAGTTGGCTGAGTTGTTTGC
CATTGGGGCCGGACTGAGAGCCGCAGTTCGCCAATTGGGGCGGCTTCAAG
TATCAGGCCATGTCGTCCAGTTCTTCACGGACTGCCAAGCGGCCATGGAA
ATGCTCCGGCCTGGGGCAAAAAGGTTGAGCCCACTCGCTGGCCGTCTGGT
GCGTCTTGTTGACGCTCTCTCTCACCGACTCTGCTCGATGGGAGTCAAGG
TCGAGCTTCATTGGATGATTGTGTCATCTGGCAGCAATCAAAATGCCCCA
GATGGGTAATCACAAAATTTTTGATGAATAAAGGCTTTGAACTATGCCAA
GGGGGTGACAGAGACGTCCCCAGATGACTATCACGTCTTCTGGGTGGACG
GATCGACAGCTGCCAACGAGGCAGCGCCTTCTGGAGTTGCAGTCATCCAC
GGGCACAGCGGACGAGACGCTGACGAGCTGTACTGCGTCGACGAGATCCG
GCTCAGCCAGTTGGCTGAGTTGTTTGCCATTGGGGCCGGACTGAGAGCCG
CAGTTCGCCAATTGGGGCGGCTTCAAGTATCAGGCCATGTCGTCCAGTTC
TTCACGGACTGCCAAGCGGCCATGGAAATGCTCCGGCCTGGGGCAAAAAG
GTTGAGCCCACTCGCTGGCCGTCTGGTGCGTCTTGTTGACGCTCTCTCTC
ACCGACTCTGCTCGATGGGAGTCAAGGTCGAGCTTCATTGGATGATTGTG
TCATCTGGCAGCAATCAAAATGCCCCAGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR036397 |
| Product | RNase H family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1099722..1101272 - |
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