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CAN33_51940-T1, CAN33_51940-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51940-T1
Unique NameCAN33_51940-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1135754..1137622-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51940-T1 ID=CAN33_51940-T1|Name=CAN33_51940-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1869bp|location=Sequence derived from alignment at NKJJ01000020.1:1135754..1137622- (Aspergillus niger FDAARGOS_311)
ATGTATCGACCCTCAGAAGAGGCAAGAAGAATTTACGATCTTCTTTGCCA
GAACTCTGAACGTCTCGGTCTCCCAAGCGAGATCTATAGTAGCCGAGTAC
AGTTTCAGGCCAATTCAGATACGATTTACTATCCGATCCCTTTCAAGGTC
ACCGAAACCCTGGCAGCTCTCAAGGGAATAGAAGGAGCCCTGGCAGCTCT
AATAGCGGATCTGCAGTCAGCATCTAAGCCACATGAACGGAAGACTACAA
TCAACCTGGAAAGGGCAACGCTTTTCGGCTTTCAGGCACTGGCCGCCAAG
ATCAATGGGTACTCCCGATCCGACCCTAAGGTCAAACGATACATGAAAGG
TAAGCCGCTCTCTTTTTCCTAGTGCAGGGAGCAGGAATTGACGAGACGAA
GATACCGATATCCATGCTGCACAATCAAATCCGTATCGGCGAATGGCAGC
CAGTATGTACCGGACCAAGCATGATAACGAGTTCTTTCATCTGCATGGCT
CTTTGAACCCAACTTCCACTCTGAAAATGCTCGGTTTAGACAGCCACCGC
GCGGATCTCACTGACTACGATGAGATCATAAACACTATTCAGAGCCAGGT
TCAAAAGTTCTCAGCAGCTGAGCTAGAGAGACTCAACGAGACGAATCGGC
AAGCAGGGGTGACGGTGTACGAGTATGAAGAATTCAAAAACACTCCCCAT
GTAAGGTGACCCTCGCAGCTCACACGGACAGAAAACCAAGATATACTCAT
ATTGTGAACAGGGTAGAACGAATATAGAGGAACCTTGGTGGAAGGTTATG
CGCCTGCCAGGGAAGACACCGCCAGCCGCTTTCAACCCTAGTGGAAGTCA
TAGGATACTCGAAGGTGTCAAGGTCTTGGAGCTCTGTTGTGTCATTGCAG
GGCCCATGATCGGTCGTACATTAGCTGAATACGGAGCGGATGTTTTGAAG
GTTACATCTCCAACGGTGCCTGACGTACCATTCTTTCAGGTCGACAATAA
CATGGGCAAGCGTGCTGTGGAATTAGATCTCAAGGCTGATGAGGATCGCC
GCCATTTCGAAGCCCTTCTCGCTGATGTCGATGTGATCATTGATGGGTAC
CGCCCTGGCGCCCTTCGAAAACTTGGATACAGCCCAGAAACTGTGGCTGC
CATGGCAGAGAAGCGTGGGAAAGGGATCGTCTACATAGACGAAACCTGCT
TTGGGCACGAAGGTGAGTGGTGCCATCGCCCAGGATGGCAACAGATAGCC
GATTGCGTATGTAACACACCCAAATGAGCTTTGCAGGGACACTCTCCTAT
TAAAACTGACTTGCAAATAGCTCACCGGATTTGCAAGGTGTCATGGGCGA
TTCCTTGGCCGTGCGGCGGAACCGATGGTATCCCCGTTGCCTATAGCTGA
CTCTGGCGCCGGTTGCATGGGTGCCATCGCTGCCTTGACGGGCCTTTACA
ATCGTATACGATACGGCGGATCGTATATTGGTCAGGTTTCCTTGATGCAG
TTCAACTTACTGCTCTTTGCTGTCGGCCAATATCCGAACTCTACAGAGTC
ACAGCTGCAGCATGCCTTTGCTCCTGCATTTTCCAAGTTACGCTTCTGCG
ACAGCGTTGGCCGCAGTTCTGTCCTGGCATTAGAGGTCATGAGGGAACGG
TTTCCACACCTCTTTGTGGAACCATCCCCAGGGGATCGCCAGAATAGTCT
GACAGAGATATGGTACTCTCATCACTACGGAGCGGACGTGGAAGTTGTAC
GACCTGTAGCTGAGATCGAGGGAGTCGAGAACGGCTTTGCTCGTGCAACT
CGACCAAACGGTGCAGATGCATCTCCATCCTGGGATTTCCCGCAGGAACA
GGGTTCCCGGAAGCTTTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1135754..1137622-

>CAN33_51940-T1 ID=CAN33_51940-T1|Name=CAN33_51940-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6768bp|location=Sequence derived from alignment at NKJJ01000020.1:1135754..1137622- (Aspergillus niger FDAARGOS_311)
CTCACCGGATTTGCAAGGTGTCATGGGCGATTCCTTGGCCGTGCGGCGGA
ACCGATGGTATCCCCGTTGCCTATAGCTGACTCTGGCGCCGGTTGCATGG
GTGCCATCGCTGCCTTGACGGGCCTTTACAATCGTATACGATACGGCGGA
TCGTATATTGGTCAGGTTTCCTTGATGCAGTTCAACTTACTGCTCTTTGC
TGTCGGCCAATATCCGAACTCTACAGAGTCACAGCTGCAGCATGCCTTTG
CTCCTGCATTTTCCAAGTTACGCTTCTGCGACAGCGTTGGCCGCAGTTCT
GTCCTGGCATTAGAGGTCATGAGGGAACGGTTTCCACACCTCTTTGTGGA
ACCATCCCCAGGGGATCGCCAGAATAGTCTGACAGAGATATGGTACTCTC
ATCACTACGGAGCGGACGTGGAAGTTGTACGACCTGTAGCTGAGATCGAG
GGAGTCGAGAACGGCTTTGCTCGTGCAACTCGACCAAACGGTGCAGATGC
ATCTCCATCCTGGGATTTCCCGCAGGAACAGGGTTCCCGGAAGCTTTAGG
GTAGAACGAATATAGAGGAACCTTGGTGGAAGGTTATGCGCCTGCCAGGG
AAGACACCGCCAGCCGCTTTCAACCCTAGTGGAAGTCATAGGATACTCGA
AGGTGTCAAGGTCTTGGAGCTCTGTTGTGTCATTGCAGGGCCCATGATCG
GTCGTACATTAGCTGAATACGGAGCGGATGTTTTGAAGGTTACATCTCCA
ACGGTGCCTGACGTACCATTCTTTCAGGTCGACAATAACATGGGCAAGCG
TGCTGTGGAATTAGATCTCAAGGCTGATGAGGATCGCCGCCATTTCGAAG
CCCTTCTCGCTGATGTCGATGTGATCATTGATGGGTACCGCCCTGGCGCC
CTTCGAAAACTTGGATACAGCCCAGAAACTGTGGCTGCCATGGCAGAGAA
GCGTGGGAAAGGGATCGTCTACATAGACGAAACCTGCTTTGGGCACGAAG
GTGAGTGGTGCCATCGCCCAGGATGGCAACAGATAGCCGATTGCATACCG
ATATCCATGCTGCACAATCAAATCCGTATCGGCGAATGGCAGCCAGTATG
TACCGGACCAAGCATGATAACGAGTTCTTTCATCTGCATGGCTCTTTGAA
CCCAACTTCCACTCTGAAAATGCTCGGTTTAGACAGCCACCGCGCGGATC
TCACTGACTACGATGAGATCATAAACACTATTCAGAGCCAGGTTCAAAAG
TTCTCAGCAGCTGAGCTAGAGAGACTCAACGAGACGAATCGGCAAGCAGG
GGTGACGGTGTACGAGTATGAAGAATTCAAAAACACTCCCCATATGTATC
GACCCTCAGAAGAGGCAAGAAGAATTTACGATCTTCTTTGCCAGAACTCT
GAACGTCTCGGTCTCCCAAGCGAGATCTATAGTAGCCGAGTACAGTTTCA
GGCCAATTCAGATACGATTTACTATCCGATCCCTTTCAAGGTCACCGAAA
CCCTGGCAGCTCTCAAGGGAATAGAAGGAGCCCTGGCAGCTCTAATAGCG
GATCTGCAGTCAGCATCTAAGCCACATGAACGGAAGACTACAATCAACCT
GGAAAGGGCAACGCTTTTCGGCTTTCAGGCACTGGCCGCCAAGATCAATG
GGTACTCCCGATCCGACCCTAAGGTCAAACGATACATGAAAGCTCACCGG
ATTTGCAAGGTGTCATGGGCGATTCCTTGGCCGTGCGGCGGAACCGATGG
TATCCCCGTTGCCTATAGCTGACTCTGGCGCCGGTTGCATGGGTGCCATC
GCTGCCTTGACGGGCCTTTACAATCGTATACGATACGGCGGATCGTATAT
TGGTCAGGTTTCCTTGATGCAGTTCAACTTACTGCTCTTTGCTGTCGGCC
AATATCCGAACTCTACAGAGTCACAGCTGCAGCATGCCTTTGCTCCTGCA
TTTTCCAAGTTACGCTTCTGCGACAGCGTTGGCCGCAGTTCTGTCCTGGC
ATTAGAGGTCATGAGGGAACGGTTTCCACACCTCTTTGTGGAACCATCCC
CAGGGGATCGCCAGAATAGTCTGACAGAGATATGGTACTCTCATCACTAC
GGAGCGGACGTGGAAGTTGTACGACCTGTAGCTGAGATCGAGGGAGTCGA
GAACGGCTTTGCTCGTGCAACTCGACCAAACGGTGCAGATGCATCTCCAT
CCTGGGATTTCCCGCAGGAACAGGGTTCCCGGAAGCTTTAGGGTAGAACG
AATATAGAGGAACCTTGGTGGAAGGTTATGCGCCTGCCAGGGAAGACACC
GCCAGCCGCTTTCAACCCTAGTGGAAGTCATAGGATACTCGAAGGTGTCA
AGGTCTTGGAGCTCTGTTGTGTCATTGCAGGGCCCATGATCGGTCGTACA
TTAGCTGAATACGGAGCGGATGTTTTGAAGGTTACATCTCCAACGGTGCC
TGACGTACCATTCTTTCAGGTCGACAATAACATGGGCAAGCGTGCTGTGG
AATTAGATCTCAAGGCTGATGAGGATCGCCGCCATTTCGAAGCCCTTCTC
GCTGATGTCGATGTGATCATTGATGGGTACCGCCCTGGCGCCCTTCGAAA
ACTTGGATACAGCCCAGAAACTGTGGCTGCCATGGCAGAGAAGCGTGGGA
AAGGGATCGTCTACATAGACGAAACCTGCTTTGGGCACGAAGGTGAGTGG
TGCCATCGCCCAGGATGGCAACAGATAGCCGATTGCATACCGATATCCAT
GCTGCACAATCAAATCCGTATCGGCGAATGGCAGCCAGTATGTACCGGAC
CAAGCATGATAACGAGTTCTTTCATCTGCATGGCTCTTTGAACCCAACTT
CCACTCTGAAAATGCTCGGTTTAGACAGCCACCGCGCGGATCTCACTGAC
TACGATGAGATCATAAACACTATTCAGAGCCAGGTTCAAAAGTTCTCAGC
AGCTGAGCTAGAGAGACTCAACGAGACGAATCGGCAAGCAGGGGTGACGG
TGTACGAGTATGAAGAATTCAAAAACACTCCCCATATGTATCGACCCTCA
GAAGAGGCAAGAAGAATTTACGATCTTCTTTGCCAGAACTCTGAACGTCT
CGGTCTCCCAAGCGAGATCTATAGTAGCCGAGTACAGTTTCAGGCCAATT
CAGATACGATTTACTATCCGATCCCTTTCAAGGTCACCGAAACCCTGGCA
GCTCTCAAGGGAATAGAAGGAGCCCTGGCAGCTCTAATAGCGGATCTGCA
GTCAGCATCTAAGCCACATGAACGGAAGACTACAATCAACCTGGAAAGGG
CAACGCTTTTCGGCTTTCAGGCACTGGCCGCCAAGATCAATGGGTACTCC
CGATCCGACCCTAAGGTCAAACGATACATGAAAGCTCACCGGATTTGCAA
GGTGTCATGGGCGATTCCTTGGCCGTGCGGCGGAACCGATGGTATCCCCG
TTGCCTATAGCTGACTCTGGCGCCGGTTGCATGGGTGCCATCGCTGCCTT
GACGGGCCTTTACAATCGTATACGATACGGCGGATCGTATATTGGTCAGG
TTTCCTTGATGCAGTTCAACTTACTGCTCTTTGCTGTCGGCCAATATCCG
AACTCTACAGAGTCACAGCTGCAGCATGCCTTTGCTCCTGCATTTTCCAA
GTTACGCTTCTGCGACAGCGTTGGCCGCAGTTCTGTCCTGGCATTAGAGG
TCATGAGGGAACGGTTTCCACACCTCTTTGTGGAACCATCCCCAGGGGAT
CGCCAGAATAGTCTGACAGAGATATGGTACTCTCATCACTACGGAGCGGA
CGTGGAAGTTGTACGACCTGTAGCTGAGATCGAGGGAGTCGAGAACGGCT
TTGCTCGTGCAACTCGACCAAACGGTGCAGATGCATCTCCATCCTGGGAT
TTCCCGCAGGAACAGGGTTCCCGGAAGCTTTAGGGTAGAACGAATATAGA
GGAACCTTGGTGGAAGGTTATGCGCCTGCCAGGGAAGACACCGCCAGCCG
CTTTCAACCCTAGTGGAAGTCATAGGATACTCGAAGGTGTCAAGGTCTTG
GAGCTCTGTTGTGTCATTGCAGGGCCCATGATCGGTCGTACATTAGCTGA
ATACGGAGCGGATGTTTTGAAGGTTACATCTCCAACGGTGCCTGACGTAC
CATTCTTTCAGGTCGACAATAACATGGGCAAGCGTGCTGTGGAATTAGAT
CTCAAGGCTGATGAGGATCGCCGCCATTTCGAAGCCCTTCTCGCTGATGT
CGATGTGATCATTGATGGGTACCGCCCTGGCGCCCTTCGAAAACTTGGAT
ACAGCCCAGAAACTGTGGCTGCCATGGCAGAGAAGCGTGGGAAAGGGATC
GTCTACATAGACGAAACCTGCTTTGGGCACGAAGGTGAGTGGTGCCATCG
CCCAGGATGGCAACAGATAGCCGATTGCATACCGATATCCATGCTGCACA
ATCAAATCCGTATCGGCGAATGGCAGCCAGTATGTACCGGACCAAGCATG
ATAACGAGTTCTTTCATCTGCATGGCTCTTTGAACCCAACTTCCACTCTG
AAAATGCTCGGTTTAGACAGCCACCGCGCGGATCTCACTGACTACGATGA
GATCATAAACACTATTCAGAGCCAGGTTCAAAAGTTCTCAGCAGCTGAGC
TAGAGAGACTCAACGAGACGAATCGGCAAGCAGGGGTGACGGTGTACGAG
TATGAAGAATTCAAAAACACTCCCCATATGTATCGACCCTCAGAAGAGGC
AAGAAGAATTTACGATCTTCTTTGCCAGAACTCTGAACGTCTCGGTCTCC
CAAGCGAGATCTATAGTAGCCGAGTACAGTTTCAGGCCAATTCAGATACG
ATTTACTATCCGATCCCTTTCAAGGTCACCGAAACCCTGGCAGCTCTCAA
GGGAATAGAAGGAGCCCTGGCAGCTCTAATAGCGGATCTGCAGTCAGCAT
CTAAGCCACATGAACGGAAGACTACAATCAACCTGGAAAGGGCAACGCTT
TTCGGCTTTCAGGCACTGGCCGCCAAGATCAATGGGTACTCCCGATCCGA
CCCTAAGGTCAAACGATACATGAAAGCTCACCGGATTTGCAAGGTGTCAT
GGGCGATTCCTTGGCCGTGCGGCGGAACCGATGGTATCCCCGTTGCCTAT
AGCTGACTCTGGCGCCGGTTGCATGGGTGCCATCGCTGCCTTGACGGGCC
TTTACAATCGTATACGATACGGCGGATCGTATATTGGTCAGGTTTCCTTG
ATGCAGTTCAACTTACTGCTCTTTGCTGTCGGCCAATATCCGAACTCTAC
AGAGTCACAGCTGCAGCATGCCTTTGCTCCTGCATTTTCCAAGTTACGCT
TCTGCGACAGCGTTGGCCGCAGTTCTGTCCTGGCATTAGAGGTCATGAGG
GAACGGTTTCCACACCTCTTTGTGGAACCATCCCCAGGGGATCGCCAGAA
TAGTCTGACAGAGATATGGTACTCTCATCACTACGGAGCGGACGTGGAAG
TTGTACGACCTGTAGCTGAGATCGAGGGAGTCGAGAACGGCTTTGCTCGT
GCAACTCGACCAAACGGTGCAGATGCATCTCCATCCTGGGATTTCCCGCA
GGAACAGGGTTCCCGGAAGCTTTAGGGTAGAACGAATATAGAGGAACCTT
GGTGGAAGGTTATGCGCCTGCCAGGGAAGACACCGCCAGCCGCTTTCAAC
CCTAGTGGAAGTCATAGGATACTCGAAGGTGTCAAGGTCTTGGAGCTCTG
TTGTGTCATTGCAGGGCCCATGATCGGTCGTACATTAGCTGAATACGGAG
CGGATGTTTTGAAGGTTACATCTCCAACGGTGCCTGACGTACCATTCTTT
CAGGTCGACAATAACATGGGCAAGCGTGCTGTGGAATTAGATCTCAAGGC
TGATGAGGATCGCCGCCATTTCGAAGCCCTTCTCGCTGATGTCGATGTGA
TCATTGATGGGTACCGCCCTGGCGCCCTTCGAAAACTTGGATACAGCCCA
GAAACTGTGGCTGCCATGGCAGAGAAGCGTGGGAAAGGGATCGTCTACAT
AGACGAAACCTGCTTTGGGCACGAAGGTGAGTGGTGCCATCGCCCAGGAT
GGCAACAGATAGCCGATTGCATACCGATATCCATGCTGCACAATCAAATC
CGTATCGGCGAATGGCAGCCAGTATGTACCGGACCAAGCATGATAACGAG
TTCTTTCATCTGCATGGCTCTTTGAACCCAACTTCCACTCTGAAAATGCT
CGGTTTAGACAGCCACCGCGCGGATCTCACTGACTACGATGAGATCATAA
ACACTATTCAGAGCCAGGTTCAAAAGTTCTCAGCAGCTGAGCTAGAGAGA
CTCAACGAGACGAATCGGCAAGCAGGGGTGACGGTGTACGAGTATGAAGA
ATTCAAAAACACTCCCCATATGTATCGACCCTCAGAAGAGGCAAGAAGAA
TTTACGATCTTCTTTGCCAGAACTCTGAACGTCTCGGTCTCCCAAGCGAG
ATCTATAGTAGCCGAGTACAGTTTCAGGCCAATTCAGATACGATTTACTA
TCCGATCCCTTTCAAGGTCACCGAAACCCTGGCAGCTCTCAAGGGAATAG
AAGGAGCCCTGGCAGCTCTAATAGCGGATCTGCAGTCAGCATCTAAGCCA
CATGAACGGAAGACTACAATCAACCTGGAAAGGGCAACGCTTTTCGGCTT
TCAGGCACTGGCCGCCAAGATCAATGGGTACTCCCGATCCGACCCTAAGG
TCAAACGATACATGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008410CoA-transferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_51940CAN33_51940Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51940-T1CAN33_51940-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51940-T1.cdsCAN33_51940-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51940-T1.exon4CAN33_51940-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_51940-T1.exon3CAN33_51940-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_51940-T1.exon2CAN33_51940-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_51940-T1.exon1CAN33_51940-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000201.2
NoteEggNog:ENOG41
NoteSMCOG1189:L-carnitine dehydratase/bile acid-inducible
DBxrefInterPro:IPR003673
DBxrefInterPro:IPR023606
DBxrefPFAM:PF02515
ProductCoA-transferase family III family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1135754..1137622 -
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