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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1147068..1148176- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_51960-T1 ID=CAN33_51960-T1|Name=CAN33_51960-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1109bp|location=Sequence derived from alignment at NKJJ01000020.1:1147068..1148176- (Aspergillus niger FDAARGOS_311)
ATGAGTCAAATTCTTCTCAAGGCGCCGCTGCGCTTCAGCCACCAATTTCA
AGCCCGAGCGTTATCAACTCAGCTATGCAAGCTTGCTAGTCATCCCACCT
CCATCCGCCCCTCCACCACCGAGATTCAAAATGCACGACTTTCGCCCCAA
AATTTGGAGGTTGCCATGCGCAGCCTTCACCAGGATGGGCTGGTCGTGGT
GGAGAATGTGATTCCTCATGATAGCCTGGATCGACTCAACGCAAAGATGA
CTGAGGATGCATACACACTTCGAAACAAAAAGGATGGTAGCCCGTTCAAC
TACAACCCCGGAAATATCCAGCAGGATGCCCCGCCAGTGCGCGGATACTT
CGACCCCCAGATCTTTCTAAGTAAGCTCCAACGAGATCACAAACCTTTAC
CCCCTCTCTATACAATAGCTAACAGTTTCAAAAAGACCCCATTGCCACGC
AGATCACTTCATCCGCATTGGGGCCCCGTCCGAAATGGACATTTTGTTCT
GGCAACACCGCCATGCCACCCACCGCTGAGCACCCGCCCATGTCCCAGCC
GGTTCACTCCGACGCCGACTTTGCGCATCCGTTCCATCCCTTCGCATATG
TGATTAATGTGCCTCTCATCACAATGACCCCGGAGAACGGCTCCACCGAG
GTGTGGCTCGGAACCCACACCGACACTGGACTCCATGTTCAAGAGGGGCT
CCACGGTGAGCGCGCAAGTGGTCGAATCAAGCTCGATGAGCTCGAAAAGC
GTCGGATAGAGCGGCCCCCTTGCCAGCCTACCGTTGCTAAGGGCTCTCTT
GTTATCAGAGACCTACGCCTGTGGCATGCCGGAATTGGCAACCAGACTGA
GACTCCTCGCGTGATGCTGGCCATGAGTAAGTCATCCTTTTTGATCGTGT
CGGAAATAGGTAATCTCACACGAATAGTCCATTTTGCCTCGTGGTATCGT
AACCCTATGAAGCTCGAGTTTGCCGATGACTTGAAGCCTCTCATTGGAAG
TCAGGCTGACGTCGAAGTCCCATGCAACTGGGTGTCAAAGTCTGAGGCCA
TGTCGCGCTATTTGAACCGTGGTTTTGGCAATGCTTACGACTTCAGCCAG
GAGCCTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1147068..1148176- >CAN33_51960-T1 ID=CAN33_51960-T1|Name=CAN33_51960-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2979bp|location=Sequence derived from alignment at NKJJ01000020.1:1147068..1148176- (Aspergillus niger FDAARGOS_311)
TCCATTTTGCCTCGTGGTATCGTAACCCTATGAAGCTCGAGTTTGCCGAT
GACTTGAAGCCTCTCATTGGAAGTCAGGCTGACGTCGAAGTCCCATGCAA
CTGGGTGTCAAAGTCTGAGGCCATGTCGCGCTATTTGAACCGTGGTTTTG
GCAATGCTTACGACTTCAGCCAGGAGCCTTAAACCCCATTGCCACGCAGA
TCACTTCATCCGCATTGGGGCCCCGTCCGAAATGGACATTTTGTTCTGGC
AACACCGCCATGCCACCCACCGCTGAGCACCCGCCCATGTCCCAGCCGGT
TCACTCCGACGCCGACTTTGCGCATCCGTTCCATCCCTTCGCATATGTGA
TTAATGTGCCTCTCATCACAATGACCCCGGAGAACGGCTCCACCGAGGTG
TGGCTCGGAACCCACACCGACACTGGACTCCATGTTCAAGAGGGGCTCCA
CGGTGAGCGCGCAAGTGGTCGAATCAAGCTCGATGAGCTCGAAAAGCGTC
GGATAGAGCGGCCCCCTTGCCAGCCTACCGTTGCTAAGGGCTCTCTTGTT
ATCAGAGACCTACGCCTGTGGCATGCCGGAATTGGCAACCAGACTGAGAC
TCCTCGCGTGATGCTGGCCATGAATGAGTCAAATTCTTCTCAAGGCGCCG
CTGCGCTTCAGCCACCAATTTCAAGCCCGAGCGTTATCAACTCAGCTATG
CAAGCTTGCTAGTCATCCCACCTCCATCCGCCCCTCCACCACCGAGATTC
AAAATGCACGACTTTCGCCCCAAAATTTGGAGGTTGCCATGCGCAGCCTT
CACCAGGATGGGCTGGTCGTGGTGGAGAATGTGATTCCTCATGATAGCCT
GGATCGACTCAACGCAAAGATGACTGAGGATGCATACACACTTCGAAACA
AAAAGGATGGTAGCCCGTTCAACTACAACCCCGGAAATATCCAGCAGGAT
GCCCCGCCAGTGCGCGGATACTTCGACCCCCAGATCTTTCTAATCCATTT
TGCCTCGTGGTATCGTAACCCTATGAAGCTCGAGTTTGCCGATGACTTGA
AGCCTCTCATTGGAAGTCAGGCTGACGTCGAAGTCCCATGCAACTGGGTG
TCAAAGTCTGAGGCCATGTCGCGCTATTTGAACCGTGGTTTTGGCAATGC
TTACGACTTCAGCCAGGAGCCTTAAACCCCATTGCCACGCAGATCACTTC
ATCCGCATTGGGGCCCCGTCCGAAATGGACATTTTGTTCTGGCAACACCG
CCATGCCACCCACCGCTGAGCACCCGCCCATGTCCCAGCCGGTTCACTCC
GACGCCGACTTTGCGCATCCGTTCCATCCCTTCGCATATGTGATTAATGT
GCCTCTCATCACAATGACCCCGGAGAACGGCTCCACCGAGGTGTGGCTCG
GAACCCACACCGACACTGGACTCCATGTTCAAGAGGGGCTCCACGGTGAG
CGCGCAAGTGGTCGAATCAAGCTCGATGAGCTCGAAAAGCGTCGGATAGA
GCGGCCCCCTTGCCAGCCTACCGTTGCTAAGGGCTCTCTTGTTATCAGAG
ACCTACGCCTGTGGCATGCCGGAATTGGCAACCAGACTGAGACTCCTCGC
GTGATGCTGGCCATGAATGAGTCAAATTCTTCTCAAGGCGCCGCTGCGCT
TCAGCCACCAATTTCAAGCCCGAGCGTTATCAACTCAGCTATGCAAGCTT
GCTAGTCATCCCACCTCCATCCGCCCCTCCACCACCGAGATTCAAAATGC
ACGACTTTCGCCCCAAAATTTGGAGGTTGCCATGCGCAGCCTTCACCAGG
ATGGGCTGGTCGTGGTGGAGAATGTGATTCCTCATGATAGCCTGGATCGA
CTCAACGCAAAGATGACTGAGGATGCATACACACTTCGAAACAAAAAGGA
TGGTAGCCCGTTCAACTACAACCCCGGAAATATCCAGCAGGATGCCCCGC
CAGTGCGCGGATACTTCGACCCCCAGATCTTTCTAATCCATTTTGCCTCG
TGGTATCGTAACCCTATGAAGCTCGAGTTTGCCGATGACTTGAAGCCTCT
CATTGGAAGTCAGGCTGACGTCGAAGTCCCATGCAACTGGGTGTCAAAGT
CTGAGGCCATGTCGCGCTATTTGAACCGTGGTTTTGGCAATGCTTACGAC
TTCAGCCAGGAGCCTTAAACCCCATTGCCACGCAGATCACTTCATCCGCA
TTGGGGCCCCGTCCGAAATGGACATTTTGTTCTGGCAACACCGCCATGCC
ACCCACCGCTGAGCACCCGCCCATGTCCCAGCCGGTTCACTCCGACGCCG
ACTTTGCGCATCCGTTCCATCCCTTCGCATATGTGATTAATGTGCCTCTC
ATCACAATGACCCCGGAGAACGGCTCCACCGAGGTGTGGCTCGGAACCCA
CACCGACACTGGACTCCATGTTCAAGAGGGGCTCCACGGTGAGCGCGCAA
GTGGTCGAATCAAGCTCGATGAGCTCGAAAAGCGTCGGATAGAGCGGCCC
CCTTGCCAGCCTACCGTTGCTAAGGGCTCTCTTGTTATCAGAGACCTACG
CCTGTGGCATGCCGGAATTGGCAACCAGACTGAGACTCCTCGCGTGATGC
TGGCCATGAATGAGTCAAATTCTTCTCAAGGCGCCGCTGCGCTTCAGCCA
CCAATTTCAAGCCCGAGCGTTATCAACTCAGCTATGCAAGCTTGCTAGTC
ATCCCACCTCCATCCGCCCCTCCACCACCGAGATTCAAAATGCACGACTT
TCGCCCCAAAATTTGGAGGTTGCCATGCGCAGCCTTCACCAGGATGGGCT
GGTCGTGGTGGAGAATGTGATTCCTCATGATAGCCTGGATCGACTCAACG
CAAAGATGACTGAGGATGCATACACACTTCGAAACAAAAAGGATGGTAGC
CCGTTCAACTACAACCCCGGAAATATCCAGCAGGATGCCCCGCCAGTGCG
CGGATACTTCGACCCCCAGATCTTTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000201.2 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | Phytanoyl-CoA dioxygenase (PhyH) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1147068..1148176 - |
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