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CAN33_52085-T1, CAN33_52085-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52085-T1
Unique NameCAN33_52085-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1254263..1254724+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52085-T1 ID=CAN33_52085-T1|Name=CAN33_52085-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=462bp|location=Sequence derived from alignment at NKJJ01000020.1:1254263..1254724+ (Aspergillus niger FDAARGOS_311)
ATGACCGCCGCCGAGTCTGTGAAGAGTGCCGTTGGGCTTGCGGACAACAC
CGGTATGTAACTGTTGCCATTGGTGTCTATTATGACGGAAGGCAGTGGTG
TGAAAGTTGGCACCCGATGATCAACGACTAACGCTTGTATTTAGCTGCCT
CCCGTCAGGAAATGTCGGATGCCCGTCTTCCCCTCCAGTACCGCGACTCT
TGCGCTGGCCTTCTGATCCCATTGAACCGCTGCCGACAGCAAGAGTACTA
CCTTCCCTGGAAGTGCGAGGTGCGTTGCTTCCACACGAGTTTATCCATGA
ATTGCTGTTCCTCTTGTCGTGTATGTAACTAATGTCATGCCTATTTCCAC
CCAATAGGACGAGAGACACAGCTACGAGAAGTGCCAATACGAGGAGTTCA
AGAAGCGCGTTGCTAAGATGGAAGAGCTCCGCGCCGCTAAGGGTGGTGCC
CGGAGCAACTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1254263..1254724+

>CAN33_52085-T1 ID=CAN33_52085-T1|Name=CAN33_52085-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=846bp|location=Sequence derived from alignment at NKJJ01000020.1:1254263..1254724+ (Aspergillus niger FDAARGOS_311)
ATGACCGCCGCCGAGTCTGTGAAGAGTGCCGTTGGGCTTGCGGACAACAC
CGCTGCCTCCCGTCAGGAAATGTCGGATGCCCGTCTTCCCCTCCAGTACC
GCGACTCTTGCGCTGGCCTTCTGATCCCATTGAACCGCTGCCGACAGCAA
GAGTACTACCTTCCCTGGAAGTGCGAGGACGAGAGACACAGCTACGAGAA
GTGCCAATACGAGGAGTTCAAGAAGCGCGTTGCTAAGATGGAAGAGCTCC
GCGCCGCTAAGGGTGGTGCCCGGAGCAACTAAATGACCGCCGCCGAGTCT
GTGAAGAGTGCCGTTGGGCTTGCGGACAACACCGCTGCCTCCCGTCAGGA
AATGTCGGATGCCCGTCTTCCCCTCCAGTACCGCGACTCTTGCGCTGGCC
TTCTGATCCCATTGAACCGCTGCCGACAGCAAGAGTACTACCTTCCCTGG
AAGTGCGAGGACGAGAGACACAGCTACGAGAAGTGCCAATACGAGGAGTT
CAAGAAGCGCGTTGCTAAGATGGAAGAGCTCCGCGCCGCTAAGGGTGGTG
CCCGGAGCAACTAAATGACCGCCGCCGAGTCTGTGAAGAGTGCCGTTGGG
CTTGCGGACAACACCGCTGCCTCCCGTCAGGAAATGTCGGATGCCCGTCT
TCCCCTCCAGTACCGCGACTCTTGCGCTGGCCTTCTGATCCCATTGAACC
GCTGCCGACAGCAAGAGTACTACCTTCCCTGGAAGTGCGAGGACGAGAGA
CACAGCTACGAGAAGTGCCAATACGAGGAGTTCAAGAAGCGCGTTGCTAA
GATGGAAGAGCTCCGCGCCGCTAAGGGTGGTGCCCGGAGCAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0003954NADH dehydrogenase activity
GO:0008137NADH dehydrogenase (ubiquinone) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52085CAN33_52085Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52085-T1.exon1CAN33_52085-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_52085-T1.exon2CAN33_52085-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52085-T1.exon3CAN33_52085-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52085-T1.cdsCAN33_52085-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52085-T1CAN33_52085-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008698
DBxrefPFAM:PF05676
ProductNADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1254263..1254724 +
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