You are here

Home

CAN33_52215-T1, CAN33_52215-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52215-T1
Unique NameCAN33_52215-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1358038..1359974-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52215-T1 ID=CAN33_52215-T1|Name=CAN33_52215-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1937bp|location=Sequence derived from alignment at NKJJ01000020.1:1358038..1359974- (Aspergillus niger FDAARGOS_311)
ATGACGCTCTTTATCCTTACGGAAACCAGCGCGGGCTATGCCCTGCTCAA
GGCCAAGGACAAGAAGCTGTTGAAGAGAGATGATCTGGCTACTGAGGCTT
CCACCGCAGAGGGTGTTTCTAACCTGTAAGTGCATTCTCATGCATTGTTT
ACTCTATTCACCCCCGATTGTCCGTCATCTGCGCGTGGTGTCTCAAAAGC
AAAAATTTTCCCCCACCGCGTCTGTACTTCGGCTAACCGCCGCAATTGTA
GTCTGAAGTTGAAGAGCTTCCAGAAGTTCGACAGCGCTGCTACCGCCCTG
GAGGAGGTCGCTTCCCTCGTCGAAGGAAAGGTTACTCCTCGCCTGGCCAG
CCTTTTGGACGAAGTCAAGGATGAGAAGAAGGTCTCTCTGGCTGTCGCCG
ACCCCAAGCTCGGTATGTGGCGCAAAGTTGTGTGGAAACTGAGGGTAAAT
TTTTCGTATGACTGACTGGAATTGGTGTAGGCAATGCTATTGGCAAGCTC
CCTGGCCTCTCCATCGAGCTGGTGGCCGACTCTTCCACGACCGACGTCTT
CCGTGCCATTCGTGAACACCTGCCCACTCTTATTCCCGGTCTTCTTCCTC
AGGACATGTCCACCATGTCCCTTGGTCTGTCGCACTCTCTCGCTAGACAC
AAGCTCAAGTTCTCCCCCGACAAGATCGACACTATGATTGTGCAGGCCAT
TGGTCTGCTTGACGACTTGGACAAGGAGCTCAACAACTACGCCATGCGTG
TGAAGGAATGGTATGGCTGGCACTTCCCTGAGCTGGCGAAGATCTTGAAC
GACAACATCGCCTACGCCAGACTCGTCCTCAAGATGGGCATGCGCACCAA
CTGGGAGTCTTCGGACCTCGCTGAGATTCTCCCCGAGGAGATTGAGGGTG
CCGTCAAGGCTGCTGCGGACCGCTCCATGGGTACCGAGATCAGCCAGGAG
GATCTGGAACACATTCAAGCTTTGGCCGAGCAGGTTGTTGGCTTCGCTGA
ATACCGTCAACAACTGGCTGGCTACCTTACCGCCCGTATGAACGCCATCG
CCCCCAACCTGACTGCCCTTGTCGGTGATCTGGTCGGTGCTCGTCTTATC
GCCCACGCTGGTAGCTTGACCAACCTGTCCAAGAGCCCCGCCAGTACTCT
CCAGATCCTGGGTGCCGAGAAGGCCCTGTTCCGTGCTCTCAAGACCAAGC
ACGATACCCCCAAGTACGGTCTGATCTACCACGCTTCCCTGATCGGCCAG
GCCACCGGCAAGAACAAGGGTAAGATGGCCAGAGTTCTCGCTGCCAAGGC
TTCCCTTGGTCTGCGTGTGGATGCCCTCGCTGAGTGGGACGATGATGCCA
CCGAGGAGGACAAGGCTGCTCTCGGTACGGAAGCTCGCTACAACCTCGAG
CGCAAGCTGGCCGCCATGGAGGGCAAGCCCCTCAAGCCTCGTGGTGTTGC
CATTGCCCCCAACGGCGCTCCTCAGGCCCAGAAGTTCGAAATCAACGAAG
CCCGCAAATACAACGCCGATGCTGATGCTGTTACGGGTGACGAGCCCGCT
TCCGCTAAGAAGAGCAAGAGCAAGAAGCTCGTAGAGGAGGTTCAGGACGA
GGAGATGGCCGATGCCGCCGACTCCGACGAGGAGTCTGACTCGTCCGACG
AGGAGACCGACAAGAAGTCCAAGAAGAGCAAGGACTCTGAGCTCGAGAAG
TTGGCCGAGAAGGCCGGTCTGAGCCTCAAGCGGTACAAGCGCAAGCTTGA
GCGTGGAGAAATCCAGTTCGACGCTGAGGGCAACCCCAGCGCAGTCAGCA
AGAAGGACATCAAGAAGGCCAAGAAGGAGGCTAAGAAGTCGGCCAAGGGT
GAGGAGAAGAAGCGCAAGCGGACAGACGACGGCGAAGTCGACAACTCCGA
GAAGAAAAAGAAGAAGAAGAAGAAGGGCGAGGAGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:1358038..1359974-

>CAN33_52215-T1 ID=CAN33_52215-T1|Name=CAN33_52215-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6780bp|location=Sequence derived from alignment at NKJJ01000020.1:1358038..1359974- (Aspergillus niger FDAARGOS_311)
TAAGCAATGCTATTGGCAAGCTCCCTGGCCTCTCCATCGAGCTGGTGGCC
GACTCTTCCACGACCGACGTCTTCCGTGCCATTCGTGAACACCTGCCCAC
TCTTATTCCCGGTCTTCTTCCTCAGGACATGTCCACCATGTCCCTTGGTC
TGTCGCACTCTCTCGCTAGACACAAGCTCAAGTTCTCCCCCGACAAGATC
GACACTATGATTGTGCAGGCCATTGGTCTGCTTGACGACTTGGACAAGGA
GCTCAACAACTACGCCATGCGTGTGAAGGAATGGTATGGCTGGCACTTCC
CTGAGCTGGCGAAGATCTTGAACGACAACATCGCCTACGCCAGACTCGTC
CTCAAGATGGGCATGCGCACCAACTGGGAGTCTTCGGACCTCGCTGAGAT
TCTCCCCGAGGAGATTGAGGGTGCCGTCAAGGCTGCTGCGGACCGCTCCA
TGGGTACCGAGATCAGCCAGGAGGATCTGGAACACATTCAAGCTTTGGCC
GAGCAGGTTGTTGGCTTCGCTGAATACCGTCAACAACTGGCTGGCTACCT
TACCGCCCGTATGAACGCCATCGCCCCCAACCTGACTGCCCTTGTCGGTG
ATCTGGTCGGTGCTCGTCTTATCGCCCACGCTGGTAGCTTGACCAACCTG
TCCAAGAGCCCCGCCAGTACTCTCCAGATCCTGGGTGCCGAGAAGGCCCT
GTTCCGTGCTCTCAAGACCAAGCACGATACCCCCAAGTACGGTCTGATCT
ACCACGCTTCCCTGATCGGCCAGGCCACCGGCAAGAACAAGGGTAAGATG
GCCAGAGTTCTCGCTGCCAAGGCTTCCCTTGGTCTGCGTGTGGATGCCCT
CGCTGAGTGGGACGATGATGCCACCGAGGAGGACAAGGCTGCTCTCGGTA
CGGAAGCTCGCTACAACCTCGAGCGCAAGCTGGCCGCCATGGAGGGCAAG
CCCCTCAAGCCTCGTGGTGTTGCCATTGCCCCCAACGGCGCTCCTCAGGC
CCAGAAGTTCGAAATCAACGAAGCCCGCAAATACAACGCCGATGCTGATG
CTGTTACGGGTGACGAGCCCGCTTCCGCTAAGAAGAGCAAGAGCAAGAAG
CTCGTAGAGGAGGTTCAGGACGAGGAGATGGCCGATGCCGCCGACTCCGA
CGAGGAGTCTGACTCGTCCGACGAGGAGACCGACAAGAAGTCCAAGAAGA
GCAAGGACTCTGAGCTCGAGAAGTTGGCCGAGAAGGCCGGTCTGAGCCTC
AAGCGGTACAAGCGCAAGCTTGAGCGTGGAGAAATCCAGTTCGACGCTGA
GGGCAACCCCAGCGCAGTCAGCAAGAAGGACATCAAGAAGGCCAAGAAGG
AGGCTAAGAAGTCGGCCAAGGGTGAGGAGAAGAAGCGCAAGCGGACAGAC
GACGGCGAATCTGAAGTTGAAGAGCTTCCAGAAGTTCGACAGCGCTGCTA
CCGCCCTGGAGGAGGTCGCTTCCCTCGTCGAAGGAAAGGTTACTCCTCGC
CTGGCCAGCCTTTTGGACGAAGTCAAGGATGAGAAGAAGGTCTCTCTGGC
TGTCGCCGACCCCAAGCTCGATGACGCTCTTTATCCTTACGGAAACCAGC
GCGGGCTATGCCCTGCTCAAGGCCAAGGACAAGAAGCTGTTGAAGAGAGA
TGATCTGGCTACTGAGGCTTCCACCGCAGAGGGTGTTTCTAACCTTAAGC
AATGCTATTGGCAAGCTCCCTGGCCTCTCCATCGAGCTGGTGGCCGACTC
TTCCACGACCGACGTCTTCCGTGCCATTCGTGAACACCTGCCCACTCTTA
TTCCCGGTCTTCTTCCTCAGGACATGTCCACCATGTCCCTTGGTCTGTCG
CACTCTCTCGCTAGACACAAGCTCAAGTTCTCCCCCGACAAGATCGACAC
TATGATTGTGCAGGCCATTGGTCTGCTTGACGACTTGGACAAGGAGCTCA
ACAACTACGCCATGCGTGTGAAGGAATGGTATGGCTGGCACTTCCCTGAG
CTGGCGAAGATCTTGAACGACAACATCGCCTACGCCAGACTCGTCCTCAA
GATGGGCATGCGCACCAACTGGGAGTCTTCGGACCTCGCTGAGATTCTCC
CCGAGGAGATTGAGGGTGCCGTCAAGGCTGCTGCGGACCGCTCCATGGGT
ACCGAGATCAGCCAGGAGGATCTGGAACACATTCAAGCTTTGGCCGAGCA
GGTTGTTGGCTTCGCTGAATACCGTCAACAACTGGCTGGCTACCTTACCG
CCCGTATGAACGCCATCGCCCCCAACCTGACTGCCCTTGTCGGTGATCTG
GTCGGTGCTCGTCTTATCGCCCACGCTGGTAGCTTGACCAACCTGTCCAA
GAGCCCCGCCAGTACTCTCCAGATCCTGGGTGCCGAGAAGGCCCTGTTCC
GTGCTCTCAAGACCAAGCACGATACCCCCAAGTACGGTCTGATCTACCAC
GCTTCCCTGATCGGCCAGGCCACCGGCAAGAACAAGGGTAAGATGGCCAG
AGTTCTCGCTGCCAAGGCTTCCCTTGGTCTGCGTGTGGATGCCCTCGCTG
AGTGGGACGATGATGCCACCGAGGAGGACAAGGCTGCTCTCGGTACGGAA
GCTCGCTACAACCTCGAGCGCAAGCTGGCCGCCATGGAGGGCAAGCCCCT
CAAGCCTCGTGGTGTTGCCATTGCCCCCAACGGCGCTCCTCAGGCCCAGA
AGTTCGAAATCAACGAAGCCCGCAAATACAACGCCGATGCTGATGCTGTT
ACGGGTGACGAGCCCGCTTCCGCTAAGAAGAGCAAGAGCAAGAAGCTCGT
AGAGGAGGTTCAGGACGAGGAGATGGCCGATGCCGCCGACTCCGACGAGG
AGTCTGACTCGTCCGACGAGGAGACCGACAAGAAGTCCAAGAAGAGCAAG
GACTCTGAGCTCGAGAAGTTGGCCGAGAAGGCCGGTCTGAGCCTCAAGCG
GTACAAGCGCAAGCTTGAGCGTGGAGAAATCCAGTTCGACGCTGAGGGCA
ACCCCAGCGCAGTCAGCAAGAAGGACATCAAGAAGGCCAAGAAGGAGGCT
AAGAAGTCGGCCAAGGGTGAGGAGAAGAAGCGCAAGCGGACAGACGACGG
CGAATCTGAAGTTGAAGAGCTTCCAGAAGTTCGACAGCGCTGCTACCGCC
CTGGAGGAGGTCGCTTCCCTCGTCGAAGGAAAGGTTACTCCTCGCCTGGC
CAGCCTTTTGGACGAAGTCAAGGATGAGAAGAAGGTCTCTCTGGCTGTCG
CCGACCCCAAGCTCGATGACGCTCTTTATCCTTACGGAAACCAGCGCGGG
CTATGCCCTGCTCAAGGCCAAGGACAAGAAGCTGTTGAAGAGAGATGATC
TGGCTACTGAGGCTTCCACCGCAGAGGGTGTTTCTAACCTTAAGCAATGC
TATTGGCAAGCTCCCTGGCCTCTCCATCGAGCTGGTGGCCGACTCTTCCA
CGACCGACGTCTTCCGTGCCATTCGTGAACACCTGCCCACTCTTATTCCC
GGTCTTCTTCCTCAGGACATGTCCACCATGTCCCTTGGTCTGTCGCACTC
TCTCGCTAGACACAAGCTCAAGTTCTCCCCCGACAAGATCGACACTATGA
TTGTGCAGGCCATTGGTCTGCTTGACGACTTGGACAAGGAGCTCAACAAC
TACGCCATGCGTGTGAAGGAATGGTATGGCTGGCACTTCCCTGAGCTGGC
GAAGATCTTGAACGACAACATCGCCTACGCCAGACTCGTCCTCAAGATGG
GCATGCGCACCAACTGGGAGTCTTCGGACCTCGCTGAGATTCTCCCCGAG
GAGATTGAGGGTGCCGTCAAGGCTGCTGCGGACCGCTCCATGGGTACCGA
GATCAGCCAGGAGGATCTGGAACACATTCAAGCTTTGGCCGAGCAGGTTG
TTGGCTTCGCTGAATACCGTCAACAACTGGCTGGCTACCTTACCGCCCGT
ATGAACGCCATCGCCCCCAACCTGACTGCCCTTGTCGGTGATCTGGTCGG
TGCTCGTCTTATCGCCCACGCTGGTAGCTTGACCAACCTGTCCAAGAGCC
CCGCCAGTACTCTCCAGATCCTGGGTGCCGAGAAGGCCCTGTTCCGTGCT
CTCAAGACCAAGCACGATACCCCCAAGTACGGTCTGATCTACCACGCTTC
CCTGATCGGCCAGGCCACCGGCAAGAACAAGGGTAAGATGGCCAGAGTTC
TCGCTGCCAAGGCTTCCCTTGGTCTGCGTGTGGATGCCCTCGCTGAGTGG
GACGATGATGCCACCGAGGAGGACAAGGCTGCTCTCGGTACGGAAGCTCG
CTACAACCTCGAGCGCAAGCTGGCCGCCATGGAGGGCAAGCCCCTCAAGC
CTCGTGGTGTTGCCATTGCCCCCAACGGCGCTCCTCAGGCCCAGAAGTTC
GAAATCAACGAAGCCCGCAAATACAACGCCGATGCTGATGCTGTTACGGG
TGACGAGCCCGCTTCCGCTAAGAAGAGCAAGAGCAAGAAGCTCGTAGAGG
AGGTTCAGGACGAGGAGATGGCCGATGCCGCCGACTCCGACGAGGAGTCT
GACTCGTCCGACGAGGAGACCGACAAGAAGTCCAAGAAGAGCAAGGACTC
TGAGCTCGAGAAGTTGGCCGAGAAGGCCGGTCTGAGCCTCAAGCGGTACA
AGCGCAAGCTTGAGCGTGGAGAAATCCAGTTCGACGCTGAGGGCAACCCC
AGCGCAGTCAGCAAGAAGGACATCAAGAAGGCCAAGAAGGAGGCTAAGAA
GTCGGCCAAGGGTGAGGAGAAGAAGCGCAAGCGGACAGACGACGGCGAAT
CTGAAGTTGAAGAGCTTCCAGAAGTTCGACAGCGCTGCTACCGCCCTGGA
GGAGGTCGCTTCCCTCGTCGAAGGAAAGGTTACTCCTCGCCTGGCCAGCC
TTTTGGACGAAGTCAAGGATGAGAAGAAGGTCTCTCTGGCTGTCGCCGAC
CCCAAGCTCGATGACGCTCTTTATCCTTACGGAAACCAGCGCGGGCTATG
CCCTGCTCAAGGCCAAGGACAAGAAGCTGTTGAAGAGAGATGATCTGGCT
ACTGAGGCTTCCACCGCAGAGGGTGTTTCTAACCTTAAGCAATGCTATTG
GCAAGCTCCCTGGCCTCTCCATCGAGCTGGTGGCCGACTCTTCCACGACC
GACGTCTTCCGTGCCATTCGTGAACACCTGCCCACTCTTATTCCCGGTCT
TCTTCCTCAGGACATGTCCACCATGTCCCTTGGTCTGTCGCACTCTCTCG
CTAGACACAAGCTCAAGTTCTCCCCCGACAAGATCGACACTATGATTGTG
CAGGCCATTGGTCTGCTTGACGACTTGGACAAGGAGCTCAACAACTACGC
CATGCGTGTGAAGGAATGGTATGGCTGGCACTTCCCTGAGCTGGCGAAGA
TCTTGAACGACAACATCGCCTACGCCAGACTCGTCCTCAAGATGGGCATG
CGCACCAACTGGGAGTCTTCGGACCTCGCTGAGATTCTCCCCGAGGAGAT
TGAGGGTGCCGTCAAGGCTGCTGCGGACCGCTCCATGGGTACCGAGATCA
GCCAGGAGGATCTGGAACACATTCAAGCTTTGGCCGAGCAGGTTGTTGGC
TTCGCTGAATACCGTCAACAACTGGCTGGCTACCTTACCGCCCGTATGAA
CGCCATCGCCCCCAACCTGACTGCCCTTGTCGGTGATCTGGTCGGTGCTC
GTCTTATCGCCCACGCTGGTAGCTTGACCAACCTGTCCAAGAGCCCCGCC
AGTACTCTCCAGATCCTGGGTGCCGAGAAGGCCCTGTTCCGTGCTCTCAA
GACCAAGCACGATACCCCCAAGTACGGTCTGATCTACCACGCTTCCCTGA
TCGGCCAGGCCACCGGCAAGAACAAGGGTAAGATGGCCAGAGTTCTCGCT
GCCAAGGCTTCCCTTGGTCTGCGTGTGGATGCCCTCGCTGAGTGGGACGA
TGATGCCACCGAGGAGGACAAGGCTGCTCTCGGTACGGAAGCTCGCTACA
ACCTCGAGCGCAAGCTGGCCGCCATGGAGGGCAAGCCCCTCAAGCCTCGT
GGTGTTGCCATTGCCCCCAACGGCGCTCCTCAGGCCCAGAAGTTCGAAAT
CAACGAAGCCCGCAAATACAACGCCGATGCTGATGCTGTTACGGGTGACG
AGCCCGCTTCCGCTAAGAAGAGCAAGAGCAAGAAGCTCGTAGAGGAGGTT
CAGGACGAGGAGATGGCCGATGCCGCCGACTCCGACGAGGAGTCTGACTC
GTCCGACGAGGAGACCGACAAGAAGTCCAAGAAGAGCAAGGACTCTGAGC
TCGAGAAGTTGGCCGAGAAGGCCGGTCTGAGCCTCAAGCGGTACAAGCGC
AAGCTTGAGCGTGGAGAAATCCAGTTCGACGCTGAGGGCAACCCCAGCGC
AGTCAGCAAGAAGGACATCAAGAAGGCCAAGAAGGAGGCTAAGAAGTCGG
CCAAGGGTGAGGAGAAGAAGCGCAAGCGGACAGACGACGGCGAATCTGAA
GTTGAAGAGCTTCCAGAAGTTCGACAGCGCTGCTACCGCCCTGGAGGAGG
TCGCTTCCCTCGTCGAAGGAAAGGTTACTCCTCGCCTGGCCAGCCTTTTG
GACGAAGTCAAGGATGAGAAGAAGGTCTCTCTGGCTGTCGCCGACCCCAA
GCTCGATGACGCTCTTTATCCTTACGGAAACCAGCGCGGGCTATGCCCTG
CTCAAGGCCAAGGACAAGAAGCTGTTGAAGAGAGATGATCTGGCTACTGA
GGCTTCCACCGCAGAGGGTGTTTCTAACCT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP58CAN33_52215Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52215-T1CAN33_52215-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52215-T1.cdsCAN33_52215-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52215-T1.exon4CAN33_52215-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_52215-T1.exon3CAN33_52215-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_52215-T1.exon2CAN33_52215-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52215-T1.exon1CAN33_52215-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036070
DBxrefInterPro:IPR002687
DBxrefInterPro:IPR029012
DBxrefInterPro:IPR012974
DBxrefInterPro:IPR042239
DBxrefInterPro:IPR012976
DBxrefPFAM:PF08156
DBxrefPFAM:PF01798
ProductNucleolar protein 58
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1358038..1359974 -
Powered by Drupal