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CAN33_52340-T1, CAN33_52340-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52340-T1
Unique NameCAN33_52340-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1440627..1441798-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52340-T1 ID=CAN33_52340-T1|Name=CAN33_52340-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1172bp|location=Sequence derived from alignment at NKJJ01000020.1:1440627..1441798- (Aspergillus niger FDAARGOS_311)
ATGGGTGCCTATCGTCTGGGTAAGTTATTCTTTTCGCTCACGGTTCTGCT
TGCCTTCTTTCAAGATGAGTTTCTCGCCGTCTCGCTTTTGGACGTTGGTT
TCACTGTTTGCTTTTCCCATGGCGTTGTTGTCAACTTGCTTGACTGGGAT
GGGGATGCGTTTGTTGTCCAGCGGTGACTGCCAACTGTCATATTGAGCCA
AATCTTGAACGAATTTTGTTCGGCTTGCCCCAAGCATGCTGTTTTTATTT
GCATGATATTTTCGACCGAATCTACACATCTTGCTCAAATCTAACCATCT
ACACAGAGCAAGCCTCAACCGGCCGCGCCGGTTGCAAAAACAAAGAATGT
AAAGACCAGGGCATCAAGATCCTCAAGGGCGAGTTGCGTCATGGCTCCTG
GGTTGATACCGAACGGTTTCAGAGCTACTTCTGGCGTCACTGGTAAGTCT
AGGAGATGAAAATTCGGACGAAAGAAGCGCCCTGCTAATGCCTTATACAG
GGGCTGTGTCACCCCCAAGATCATTGCTAATATGATTGAAACGGTCGGTG
AAGAAGGCGAGAGAGACTGGTCAGCCTTGGATGGCTATGACGAACTCCCT
GAAGATTTGCAGGAGAAGGTTCGCAGAGCATTGTTGCAGGGCCATGTTGA
TGATGAAGATTGGAAGGGGGTAAGTTTTTAGAATCAGTTTCATACTTAAT
TTCAACTTTTCTGTCTGTAAGAAGTCTGACTTTTGTCTCAGGATGTCGAA
TTAAATCGGCCTGGAAAGACGGGATTTCGGAAGCGTGTGACCAAGAAGGA
CAAGGTATGTTCTTCCGCTCCAAGAATCTAGCTCTATCGATGCTAATCTG
CCCAGGACGAAACCCCAGAGGAGTCCACTCCAAAGAAGGCCACTCCTCAG
AGTAAGAAACGCGCTCGCGCTGAGCCCAAGGAGGAATCCGGCTCTGAAGC
TGAGGAAGGAGACACCAAGGAAAAGCCTAAGGCTAAAAAGGCCACTCCCC
AGACCAAGAAGCGCGCTCGTGCGGAGCCTAAGAAAGAAGCCGAGTCTGAG
GCTGAAGAAGAGGTTACTAAAGAGACGCCTAAGACCAAGAAGGCCGCTCC
CCAGACCAAGAAGCGTACCAAAGCTGGAGCCGAAGCTGAAGCTGATGAAG
CTAAAGACACGCCCAAGACTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1440627..1441798-

>CAN33_52340-T1 ID=CAN33_52340-T1|Name=CAN33_52340-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3906bp|location=Sequence derived from alignment at NKJJ01000020.1:1440627..1441798- (Aspergillus niger FDAARGOS_311)
ACTAAGACGAAACCCCAGAGGAGTCCACTCCAAAGAAGGCCACTCCTCAG
AGTAAGAAACGCGCTCGCGCTGAGCCCAAGGAGGAATCCGGCTCTGAAGC
TGAGGAAGGAGACACCAAGGAAAAGCCTAAGGCTAAAAAGGCCACTCCCC
AGACCAAGAAGCGCGCTCGTGCGGAGCCTAAGAAAGAAGCCGAGTCTGAG
GCTGAAGAAGAGGTTACTAAAGAGACGCCTAAGACCAAGAAGGCCGCTCC
CCAGACCAAGAAGCGATGTCGAATTAAATCGGCCTGGAAAGACGGGATTT
CGGAAGCGTGTGACCAAGAAGGACAAGGGGCTGTGTCACCCCCAAGATCA
TTGCTAATATGATTGAAACGGTCGGTGAAGAAGGCGAGAGAGACTGGTCA
GCCTTGGATGGCTATGACGAACTCCCTGAAGATTTGCAGGAGAAGGTTCG
CAGAGCATTGTTGCAGGGCCATGTTGATGATGAAGATTGGAAGGGGAGCA
AGCCTCAACCGGCCGCGCCGGTTGCAAAAACAAAGAATGTAAAGACCAGG
GCATCAAGATCCTCAAGGGCGAGTTGCGTCATGGCTCCTGGGTTGATACC
GAACGGTTTCAGAGCTACTTCTGGCGTCACTGATGGGTGCCTATCGTCTG
GACTAAGACGAAACCCCAGAGGAGTCCACTCCAAAGAAGGCCACTCCTCA
GAGTAAGAAACGCGCTCGCGCTGAGCCCAAGGAGGAATCCGGCTCTGAAG
CTGAGGAAGGAGACACCAAGGAAAAGCCTAAGGCTAAAAAGGCCACTCCC
CAGACCAAGAAGCGCGCTCGTGCGGAGCCTAAGAAAGAAGCCGAGTCTGA
GGCTGAAGAAGAGGTTACTAAAGAGACGCCTAAGACCAAGAAGGCCGCTC
CCCAGACCAAGAAGCGATGTCGAATTAAATCGGCCTGGAAAGACGGGATT
TCGGAAGCGTGTGACCAAGAAGGACAAGGGGCTGTGTCACCCCCAAGATC
ATTGCTAATATGATTGAAACGGTCGGTGAAGAAGGCGAGAGAGACTGGTC
AGCCTTGGATGGCTATGACGAACTCCCTGAAGATTTGCAGGAGAAGGTTC
GCAGAGCATTGTTGCAGGGCCATGTTGATGATGAAGATTGGAAGGGGAGC
AAGCCTCAACCGGCCGCGCCGGTTGCAAAAACAAAGAATGTAAAGACCAG
GGCATCAAGATCCTCAAGGGCGAGTTGCGTCATGGCTCCTGGGTTGATAC
CGAACGGTTTCAGAGCTACTTCTGGCGTCACTGATGGGTGCCTATCGTCT
GGACTAAGACGAAACCCCAGAGGAGTCCACTCCAAAGAAGGCCACTCCTC
AGAGTAAGAAACGCGCTCGCGCTGAGCCCAAGGAGGAATCCGGCTCTGAA
GCTGAGGAAGGAGACACCAAGGAAAAGCCTAAGGCTAAAAAGGCCACTCC
CCAGACCAAGAAGCGCGCTCGTGCGGAGCCTAAGAAAGAAGCCGAGTCTG
AGGCTGAAGAAGAGGTTACTAAAGAGACGCCTAAGACCAAGAAGGCCGCT
CCCCAGACCAAGAAGCGATGTCGAATTAAATCGGCCTGGAAAGACGGGAT
TTCGGAAGCGTGTGACCAAGAAGGACAAGGGGCTGTGTCACCCCCAAGAT
CATTGCTAATATGATTGAAACGGTCGGTGAAGAAGGCGAGAGAGACTGGT
CAGCCTTGGATGGCTATGACGAACTCCCTGAAGATTTGCAGGAGAAGGTT
CGCAGAGCATTGTTGCAGGGCCATGTTGATGATGAAGATTGGAAGGGGAG
CAAGCCTCAACCGGCCGCGCCGGTTGCAAAAACAAAGAATGTAAAGACCA
GGGCATCAAGATCCTCAAGGGCGAGTTGCGTCATGGCTCCTGGGTTGATA
CCGAACGGTTTCAGAGCTACTTCTGGCGTCACTGATGGGTGCCTATCGTC
TGGACTAAGACGAAACCCCAGAGGAGTCCACTCCAAAGAAGGCCACTCCT
CAGAGTAAGAAACGCGCTCGCGCTGAGCCCAAGGAGGAATCCGGCTCTGA
AGCTGAGGAAGGAGACACCAAGGAAAAGCCTAAGGCTAAAAAGGCCACTC
CCCAGACCAAGAAGCGCGCTCGTGCGGAGCCTAAGAAAGAAGCCGAGTCT
GAGGCTGAAGAAGAGGTTACTAAAGAGACGCCTAAGACCAAGAAGGCCGC
TCCCCAGACCAAGAAGCGATGTCGAATTAAATCGGCCTGGAAAGACGGGA
TTTCGGAAGCGTGTGACCAAGAAGGACAAGGGGCTGTGTCACCCCCAAGA
TCATTGCTAATATGATTGAAACGGTCGGTGAAGAAGGCGAGAGAGACTGG
TCAGCCTTGGATGGCTATGACGAACTCCCTGAAGATTTGCAGGAGAAGGT
TCGCAGAGCATTGTTGCAGGGCCATGTTGATGATGAAGATTGGAAGGGGA
GCAAGCCTCAACCGGCCGCGCCGGTTGCAAAAACAAAGAATGTAAAGACC
AGGGCATCAAGATCCTCAAGGGCGAGTTGCGTCATGGCTCCTGGGTTGAT
ACCGAACGGTTTCAGAGCTACTTCTGGCGTCACTGATGGGTGCCTATCGT
CTGGACTAAGACGAAACCCCAGAGGAGTCCACTCCAAAGAAGGCCACTCC
TCAGAGTAAGAAACGCGCTCGCGCTGAGCCCAAGGAGGAATCCGGCTCTG
AAGCTGAGGAAGGAGACACCAAGGAAAAGCCTAAGGCTAAAAAGGCCACT
CCCCAGACCAAGAAGCGCGCTCGTGCGGAGCCTAAGAAAGAAGCCGAGTC
TGAGGCTGAAGAAGAGGTTACTAAAGAGACGCCTAAGACCAAGAAGGCCG
CTCCCCAGACCAAGAAGCGATGTCGAATTAAATCGGCCTGGAAAGACGGG
ATTTCGGAAGCGTGTGACCAAGAAGGACAAGGGGCTGTGTCACCCCCAAG
ATCATTGCTAATATGATTGAAACGGTCGGTGAAGAAGGCGAGAGAGACTG
GTCAGCCTTGGATGGCTATGACGAACTCCCTGAAGATTTGCAGGAGAAGG
TTCGCAGAGCATTGTTGCAGGGCCATGTTGATGATGAAGATTGGAAGGGG
AGCAAGCCTCAACCGGCCGCGCCGGTTGCAAAAACAAAGAATGTAAAGAC
CAGGGCATCAAGATCCTCAAGGGCGAGTTGCGTCATGGCTCCTGGGTTGA
TACCGAACGGTTTCAGAGCTACTTCTGGCGTCACTGATGGGTGCCTATCG
TCTGGACTAAGACGAAACCCCAGAGGAGTCCACTCCAAAGAAGGCCACTC
CTCAGAGTAAGAAACGCGCTCGCGCTGAGCCCAAGGAGGAATCCGGCTCT
GAAGCTGAGGAAGGAGACACCAAGGAAAAGCCTAAGGCTAAAAAGGCCAC
TCCCCAGACCAAGAAGCGCGCTCGTGCGGAGCCTAAGAAAGAAGCCGAGT
CTGAGGCTGAAGAAGAGGTTACTAAAGAGACGCCTAAGACCAAGAAGGCC
GCTCCCCAGACCAAGAAGCGATGTCGAATTAAATCGGCCTGGAAAGACGG
GATTTCGGAAGCGTGTGACCAAGAAGGACAAGGGGCTGTGTCACCCCCAA
GATCATTGCTAATATGATTGAAACGGTCGGTGAAGAAGGCGAGAGAGACT
GGTCAGCCTTGGATGGCTATGACGAACTCCCTGAAGATTTGCAGGAGAAG
GTTCGCAGAGCATTGTTGCAGGGCCATGTTGATGATGAAGATTGGAAGGG
GAGCAAGCCTCAACCGGCCGCGCCGGTTGCAAAAACAAAGAATGTAAAGA
CCAGGGCATCAAGATCCTCAAGGGCGAGTTGCGTCATGGCTCCTGGGTTG
ATACCGAACGGTTTCAGAGCTACTTCTGGCGTCACTGATGGGTGCCTATC
GTCTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52340CAN33_52340Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52340-T1CAN33_52340-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52340-T1.cdsCAN33_52340-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52340-T1.exon6CAN33_52340-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_52340-T1.exon5CAN33_52340-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_52340-T1.exon4CAN33_52340-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_52340-T1.exon3CAN33_52340-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_52340-T1.exon2CAN33_52340-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52340-T1.exon1CAN33_52340-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036957
DBxrefInterPro:IPR001510
DBxrefPFAM:PF00645
ProductPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1440627..1441798 -
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