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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1459841..1461395- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_52385-T1 ID=CAN33_52385-T1|Name=CAN33_52385-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1555bp|location=Sequence derived from alignment at NKJJ01000020.1:1459841..1461395- (Aspergillus niger FDAARGOS_311)
ATGGCGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGAACCTCCT
CAGGGGCCCCCGCCAACCTACAACCAAGCTGTGTATGGGTTTGATGAAGC
TTTCCAAGTCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTGG
TAGGTATCCCTATGTTTCCACATATAGAAGGTCAATACTAAACCTCTGGC
AGTTCATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATC
CATCGCTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGC
GAGCAACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCG
TCCTCTGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGA
TACTTCTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTT
CGCTCTCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTG
GCATAGTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGC
TGGATCCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGA
CGTCTCGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCC
TAGTCGCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATC
TACGTTGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAA
TGGCTCCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACG
TCACCTTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACAC
ACCACCATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCC
GCAAGGCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCA
CCTACTCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATT
CAAATGCTCCGGCAAGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCA
GGGCAGTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCT
CCTTGCTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCAT
ATCGCCCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAA
AATGATGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGG
GTCCGGTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTG
CTGGCATATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGG
GGATTTCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGA
TTTGTCAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTT
GCTGCTATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGAT
GTATTATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATG
CTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1459841..1461395- >CAN33_52385-T1 ID=CAN33_52385-T1|Name=CAN33_52385-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4428bp|location=Sequence derived from alignment at NKJJ01000020.1:1459841..1461395- (Aspergillus niger FDAARGOS_311)
TTCATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATCCA
TCGCTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGCGA
GCAACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCGTC
CTCTGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGATA
CTTCTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTTCG
CTCTCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTGGC
ATAGTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGCTG
GATCCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGACG
TCTCGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCCTA
GTCGCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATCTA
CGTTGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAATG
GCTCCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACGTC
ACCTTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACACAC
CACCATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCCGC
AAGGCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCACC
TACTCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATTCA
AATGCTCCGGCAAGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCAGG
GCAGTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCTCC
TTGCTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCATAT
CGCCCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAAAA
TGATGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGGGT
CCGGTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTGCT
GGCATATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGGGG
ATTTCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGATT
TGTCAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTTGC
TGCTATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGATGT
ATTATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATGCT
TGATCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTGATGGCG
GTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGAACCTCCTCAGGGG
CCCCCGCCAACCTACAACCAAGCTGTTTCATTGCCGTCTTCCTCGGCTAC
GTTGCAGTGTCCGGCGTGACCATCCATCGCTATGCGAAATACAAAGGCTT
CAGCGGCGGCGGCATTTACGATGCGAGCAACGACTTCTCCCTCAACACAA
ACACCCTCGTGCTCTTCATATTCGTCCTCTGTGTGGCCCTCGCCTTCTCA
TATGCCTACTTTCTCGGTGCGCGATACTTCTCCAAGCTCTTCATCTGGGT
CACGGGCATCTTGAACATCGTCTTCGCTCTCGCCACTGGTATCTACTACA
TCGTTCGGGGGCAATACGGCGGTGGCATAGTCTTCCTCATTTTCGGCGTC
TTCGCCATCGTCTGCTTCATCAGCTGGATCCCCCGCATCCCGTTCACAGC
CTACATGATGGAGGTCTCCATCGACGTCTCGCGCCAATACGGCCACATGT
TCCTGGTCAGCACCATCGGTGGCCTAGTCGCCGTCGCCTTCGCCGCCTGG
TTCTCCGTCACGCTCGTTTCGATCTACGTTGCCTACGAGCCCGACAGCAC
CGGCGTCAACCCGGCCTGCCCCAATGGCTCCGGCGGCTGCAGCACCGCCC
GAGTCATCGGCCTAGTCGTCTACGTCACCTTTGCCATGTACTGGTTCAGC
GAATGGCTCAAGAACACCGTACACACCACCATCGCCGGCGTCTACGGCTC
CTGGTACTTCTTCGCCAACTCGCCGCAAGGCATGCCCCACGGTGCCACGC
GCGGCGCCTTCCGTCGCGCCACCACCTACTCCTTCGGCAGCATCAGCTTC
GGTTCGCTCATTCTCGCCTTGATTCAAATGCTCCGGCAAGCGTGCTCCAT
CGCGCAGCAGCAGGAAGCTGCCCAGGGCAGTCTCATCGGTAGCATTGGGT
TCTGGGTCCTGGGTTGTTTCATCTCCTTGCTCGATTGGCTCGTCACGTTC
TTCAATCGCTACGCGTTCTGCCATATCGCCCTGTACGGGAAAGCATATAT
CCCCTCTGCCAAGGATACGTGGAAAATGATGAAGGACCGTGGCGTGGACG
CCCTTGTTAATGATTGTCTGGTGGGTCCGGTGTTGACGATGGGGTCCGTG
TTCGTCTCGTATGTGTGCGCGCTGCTGGCATATTTGTATCTCCAGTTCAC
GAACCCTGGGTATAATCAGGGCGGGGATTTCACGGCAGTCATTATGGCGT
TTGCGTTTGTGATTGGGTTGCAGATTTGTCAGATCTTTATGACCCCTGTG
AGTAGTGGCATTGAAACTATCTTTGCTGCTATGGCGTGGGATCCGCAGGT
TTTGGTGCATGATCATTCCGAGATGTATTATCGGTTGGTGCAGTTGTATC
CGAAGGTGCAGCAGGCCATCCATGCTTGATCGAACGGCCCAAGTACAATG
ACATCTGGGCGGGACTCTTGATGGCGGTGATTATCGAGGACCTGAACCGA
AACCTCCTCAGGAACCTCCTCAGGGGCCCCCGCCAACCTACAACCAAGCT
GTTTCATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATC
CATCGCTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGC
GAGCAACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCG
TCCTCTGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGA
TACTTCTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTT
CGCTCTCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTG
GCATAGTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGC
TGGATCCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGA
CGTCTCGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCC
TAGTCGCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATC
TACGTTGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAA
TGGCTCCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACG
TCACCTTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACAC
ACCACCATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCC
GCAAGGCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCA
CCTACTCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATT
CAAATGCTCCGGCAAGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCA
GGGCAGTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCT
CCTTGCTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCAT
ATCGCCCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAA
AATGATGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGG
GTCCGGTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTG
CTGGCATATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGG
GGATTTCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGA
TTTGTCAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTT
GCTGCTATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGAT
GTATTATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATG
CTTGATCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTGATGG
CGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGAACCTCCTCAGG
GGCCCCCGCCAACCTACAACCAAGCTGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007603 |
| DBxref | PFAM:PF04515 |
| Product | neither null mutation nor overexpression affects choline transport |
| Product | Putative choline transporter |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1459841..1461395 - |
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