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CAN33_52540-T1, CAN33_52540-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52540-T1
Unique NameCAN33_52540-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1557591..1558192-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52540-T1 ID=CAN33_52540-T1|Name=CAN33_52540-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=602bp|location=Sequence derived from alignment at NKJJ01000020.1:1557591..1558192- (Aspergillus niger FDAARGOS_311)
ATGATACAGAAAGCACTACTTGCAGGTATTCAAGCCGGACAGAAAGATAT
GGTGGCATTGCTTCTGGACCGTGGTGCACAGCCGAACTTTTATCGGGGTC
GTCGGGTTGCCAAATACCTATTTGGCTTGGCTATGTTGCCGGACTATCCT
CCCCCAGACGCTCCACCACAATTTCTGGCCGTTCAGTGCGGTAATGAAGA
GCTCGTGGAGTGTTTGTTGAGCCGGGGGCTGAACCAGATCGATATCATGC
CTCGCCTTTATACCGAGCTGTTGCTGATGGGAGAAAAGACATTGTGCTTG
TGTTGATGCAGGGCGGAGCGACGAATGTTGAGAGCTCCTTGAAATTGGCG
GCGCAGCGGGGAGATCAATCAATGATGGAATTCATGCTGGGGCATGGTGC
CCGGGCTGATCTATGTGGTGCTGCCGCGCATCATGTGGCGCTACGTATAG
GTGATGATGATATGGCTTGTCTGTTGAAATCAAAGGGAGCCCCTGCTTAC
TATCTGTGGGAGTCGAAGGATGACTGGGACGAAGAAGAAGGGGATGGGAC
TAAACCTGAACTGAAGTTGTATGGTTGCGGACTGGGCATGTCTCAGTTCT
AG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1557591..1558192-

>CAN33_52540-T1 ID=CAN33_52540-T1|Name=CAN33_52540-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1050bp|location=Sequence derived from alignment at NKJJ01000020.1:1557591..1558192- (Aspergillus niger FDAARGOS_311)
ACATTGTGCTTGTGTTGATGCAGGGCGGAGCGACGAATGTTGAGAGCTCC
TTGAAATTGGCGGCGCAGCGGGGAGATCAATCAATGATGGAATTCATGCT
GGGGCATGGTGCCCGGGCTGATCTATGTGGTGCTGCCGCGCATCATGTGG
CGCTACGTATAGGTGATGATGATATGGCTTGTCTGTTGAAATCAAAGGGA
GCCCCTGCTTACTATCTGTGGGAGTCGAAGGATGACTGGGACGAAGAAGA
AGGGGATGGGACTAAACCTGAACTGAAGTTGTATGGTTGCGGACTGGGCA
TGTCTCAGTTCTAGATGATACAGAAAGCACTACTTGCAGGTATTCAAGCC
GGACAGAAAGATATGGTGGCATTGCTTCTGGACCGTGGTGCACAGCCGAA
CTTTTATCGGGGTCGTCGGGTTGCCAAATACCTATTTGGCTTGGCTATGT
TGCCGGACTATCCTCCCCCAGACGCTCCACCACAATTTCTGGCCGTTCAG
TGCGGTAATGAAGAGCTCGTGGAGTACATTGTGCTTGTGTTGATGCAGGG
CGGAGCGACGAATGTTGAGAGCTCCTTGAAATTGGCGGCGCAGCGGGGAG
ATCAATCAATGATGGAATTCATGCTGGGGCATGGTGCCCGGGCTGATCTA
TGTGGTGCTGCCGCGCATCATGTGGCGCTACGTATAGGTGATGATGATAT
GGCTTGTCTGTTGAAATCAAAGGGAGCCCCTGCTTACTATCTGTGGGAGT
CGAAGGATGACTGGGACGAAGAAGAAGGGGATGGGACTAAACCTGAACTG
AAGTTGTATGGTTGCGGACTGGGCATGTCTCAGTTCTAGATGATACAGAA
AGCACTACTTGCAGGTATTCAAGCCGGACAGAAAGATATGGTGGCATTGC
TTCTGGACCGTGGTGCACAGCCGAACTTTTATCGGGGTCGTCGGGTTGCC
AAATACCTATTTGGCTTGGCTATGTTGCCGGACTATCCTCCCCCAGACGC
TCCACCACAATTTCTGGCCGTTCAGTGCGGTAATGAAGAGCTCGTGGAGT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52540CAN33_52540Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52540-T1CAN33_52540-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52540-T1.cdsCAN33_52540-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52540-T1.exon2CAN33_52540-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52540-T1.exon1CAN33_52540-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036770
ProductAnkyrin repeats (3 copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1557591..1558192 -
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