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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:891649..893709- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_5255-T1 ID=CAN33_5255-T1|Name=CAN33_5255-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2061bp|location=Sequence derived from alignment at NKJJ01000019.1:891649..893709- (Aspergillus niger FDAARGOS_311)
ATGTCGAATCCTACGCAGCCTTTTGACTCTCGGCGGGCGACAAGCTACGG
TCGACCTGAGGAGCTCCATATTCCATCTGCGGGCCCCAATCTGCAGCGAC
AATCGATGTCTCACGAATACCCCGCCGGTCAAGACAACCCTGTCCCTTCT
ATCAACGTTCATTCATTGGGGTCACAACCGGGTCAGTATGGTGGTGGTGG
AAGCAGCGGCGCGAGCGGAGTACTCCCGGGAGCGCTTCAGCCGGGCAACG
TCAACCGTCCACCTGCAGTATCAGTCAACACTGCACCTTCGGCGCTACCA
ACCCTACCAGAACTGAATACCCCAATGCAGCCAACATCACAATCAGGACA
ACAGCCACCGTCTGCACAACAACAGCAAACGCCCCAACAGCAGCAGCCGA
ATGCCCGCGCCAGTATGGTCAACTCTCATGGGCATTCTAGATCCAGCCCA
GCAGGGTTTGAGCAGCCAAAATACAGACAGCCAGGTTCCTCTCCAGGCTC
TGCATATCCTCCCCATACTCCCCAGGGTACAAAATACTCGCCGTTGGGTC
TAGCCGACATCCGACCGACAGGAGACCTTCTGGGTGACCCAATCACCAGC
TCCGGAATGGCACCGTTCAACGGGGATAATCCGGTACCTACCAATAGCAA
CTACATTGCTCCTTGGCCCATATATTCTATGGATTGGTGTAAATGGCCTA
TTACGGGGAGCTCCAGCTCGTTCGGGGGCAAAATCGCCTTGGGAAGCTAC
CTAGAGGACAACCACAACTACGTACGCATATACCTGCCACTTCCCGCTGT
TCATCTTCGCAGCTTCCAATTGTGCTAATTCGGGGAATAGATACAAATTA
TAGATACTCATTGGACACAACCAGACCCGGATACGCCGGACGCCGCTGCG
GGGGAGATCAAACTCGACTATGTGAAGACCGCAGAGGCCACCCATTCGTA
TCCGGTAACACGGATCCTCTGGGAGCCGCCATCATCTCAGAAACAGTCTA
CCGATCTGTTGGCCACATCTGGTGATCATCTGCGATTATGGTCGCTGCCA
ACGGCGCAACCCGTACCAAGCTCCAACTCCATTACGCGGTCGGCCAGCCA
ACACGCACCGACAGCGAAACTGTCGCCGCTGGCTTTGCTCTCAAATTCCA
AGTCACCCGAGCATACCGCTCCAATCACCTCATTGGACTGGAATACAATT
TCCCCCAGTCTGATCATTACCTCCAGTATCGATACCACCTGCACGATCTG
GGATATTCCCACCCTTACCGCCAAGACACAGCTGATCGCACATGACAAAG
AGGTATACGATGTTCGATTCTGTGCGAATAGCGTGGACGTCTTTGTCAGC
TGTGGCGCTGATGGTAGTGTGCGCATGTTCGATCTCCGCAGCCTAGAACA
TAGCACTATCATCTACGAGCCCACCGAGAAACATGAGAAGGGTAATGCCA
ATTCTTCCTTTACCAGAACCTGAATAGTACACTAACGGGTACATGCACTA
GTCCCCACTCCGGGCAATGGCAGTCCTTCTGGGCAAGCCCAGCCCGTATG
GCCCCCGCCTCTACTACGCATCGCTGGTATGTATCTGGTCGAGCTTGCTG
GCTGCCATTGACACTGGACGCTAACTGTCATAGCATCGCCCCATGATTCC
CACCTTCTTGCCACTTTCTCGCAAGATTCCAACATTGTCCGGGTTCTAGA
CGTCCGGCAGCCTGGACAGGCTCTTCTTGAACTGAAGGGCCACGGCTCCT
CCATCAACTGCGTTGAGTGGTCGCCCAACCGCCGCGGAGTCCTGGCTTCT
GGTGCGGACGACTGCTTCGTACTTCTGTGGGACCTCATCAACCAGCACAA
TGCGGCTCCTGTGCCTCCCATGCCTCCCGTCCCGCATAATGCGGGCACGC
CCGCGACACCCAGTGAGCGAGGTCCAGCCGCCGTGTGGCTCTGCGACAAC
GAAGTGTCGAACATTAGCTGGTCGCCGCAGGGCGGTACCACGCCTGCCGG
GCATCCGCGCGACTGGCTCGGGGTCTGCGGTGGACGTGGACTATGGGGAG
TGGCACTGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:891649..893709- >CAN33_5255-T1 ID=CAN33_5255-T1|Name=CAN33_5255-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7500bp|location=Sequence derived from alignment at NKJJ01000019.1:891649..893709- (Aspergillus niger FDAARGOS_311)
CATCGCCCCATGATTCCCACCTTCTTGCCACTTTCTCGCAAGATTCCAAC
ATTGTCCGGGTTCTAGACGTCCGGCAGCCTGGACAGGCTCTTCTTGAACT
GAAGGGCCACGGCTCCTCCATCAACTGCGTTGAGTGGTCGCCCAACCGCC
GCGGAGTCCTGGCTTCTGGTGCGGACGACTGCTTCGTACTTCTGTGGGAC
CTCATCAACCAGCACAATGCGGCTCCTGTGCCTCCCATGCCTCCCGTCCC
GCATAATGCGGGCACGCCCGCGACACCCAGTGAGCGAGGTCCAGCCGCCG
TGTGGCTCTGCGACAACGAAGTGTCGAACATTAGCTGGTCGCCGCAGGGC
GGTACCACGCCTGCCGGGCATCCGCGCGACTGGCTCGGGGTCTGCGGTGG
ACGTGGACTATGGGGAGTGGCACTGTAGTCCCCACTCCGGGCAATGGCAG
TCCTTCTGGGCAAGCCCAGCCCGTATGGCCCCCGCCTCTACTACGCATCG
CTGATACAAATTATAGATACTCATTGGACACAACCAGACCCGGATACGCC
GGACGCCGCTGCGGGGGAGATCAAACTCGACTATGTGAAGACCGCAGAGG
CCACCCATTCGTATCCGGTAACACGGATCCTCTGGGAGCCGCCATCATCT
CAGAAACAGTCTACCGATCTGTTGGCCACATCTGGTGATCATCTGCGATT
ATGGTCGCTGCCAACGGCGCAACCCGTACCAAGCTCCAACTCCATTACGC
GGTCGGCCAGCCAACACGCACCGACAGCGAAACTGTCGCCGCTGGCTTTG
CTCTCAAATTCCAAGTCACCCGAGCATACCGCTCCAATCACCTCATTGGA
CTGGAATACAATTTCCCCCAGTCTGATCATTACCTCCAGTATCGATACCA
CCTGCACGATCTGGGATATTCCCACCCTTACCGCCAAGACACAGCTGATC
GCACATGACAAAGAGGTATACGATGTTCGATTCTGTGCGAATAGCGTGGA
CGTCTTTGTCAGCTGTGGCGCTGATGGTAGTGTGCGCATGTTCGATCTCC
GCAGCCTAGAACATAGCACTATCATCTACGAGCCCACCGAGAAACATGAG
AAGGATGTCGAATCCTACGCAGCCTTTTGACTCTCGGCGGGCGACAAGCT
ACGGTCGACCTGAGGAGCTCCATATTCCATCTGCGGGCCCCAATCTGCAG
CGACAATCGATGTCTCACGAATACCCCGCCGGTCAAGACAACCCTGTCCC
TTCTATCAACGTTCATTCATTGGGGTCACAACCGGGTCAGTATGGTGGTG
GTGGAAGCAGCGGCGCGAGCGGAGTACTCCCGGGAGCGCTTCAGCCGGGC
AACGTCAACCGTCCACCTGCAGTATCAGTCAACACTGCACCTTCGGCGCT
ACCAACCCTACCAGAACTGAATACCCCAATGCAGCCAACATCACAATCAG
GACAACAGCCACCGTCTGCACAACAACAGCAAACGCCCCAACAGCAGCAG
CCGAATGCCCGCGCCAGTATGGTCAACTCTCATGGGCATTCTAGATCCAG
CCCAGCAGGGTTTGAGCAGCCAAAATACAGACAGCCAGGTTCCTCTCCAG
GCTCTGCATATCCTCCCCATACTCCCCAGGGTACAAAATACTCGCCGTTG
GGTCTAGCCGACATCCGACCGACAGGAGACCTTCTGGGTGACCCAATCAC
CAGCTCCGGAATGGCACCGTTCAACGGGGATAATCCGGTACCTACCAATA
GCAACTACATTGCTCCTTGGCCCATATATTCTATGGATTGGTGTAAATGG
CCTATTACGGGGAGCTCCAGCTCGTTCGGGGGCAAAATCGCCTTGGGAAG
CTACCTAGAGGACAACCACAACTACCATCGCCCCATGATTCCCACCTTCT
TGCCACTTTCTCGCAAGATTCCAACATTGTCCGGGTTCTAGACGTCCGGC
AGCCTGGACAGGCTCTTCTTGAACTGAAGGGCCACGGCTCCTCCATCAAC
TGCGTTGAGTGGTCGCCCAACCGCCGCGGAGTCCTGGCTTCTGGTGCGGA
CGACTGCTTCGTACTTCTGTGGGACCTCATCAACCAGCACAATGCGGCTC
CTGTGCCTCCCATGCCTCCCGTCCCGCATAATGCGGGCACGCCCGCGACA
CCCAGTGAGCGAGGTCCAGCCGCCGTGTGGCTCTGCGACAACGAAGTGTC
GAACATTAGCTGGTCGCCGCAGGGCGGTACCACGCCTGCCGGGCATCCGC
GCGACTGGCTCGGGGTCTGCGGTGGACGTGGACTATGGGGAGTGGCACTG
TAGTCCCCACTCCGGGCAATGGCAGTCCTTCTGGGCAAGCCCAGCCCGTA
TGGCCCCCGCCTCTACTACGCATCGCTGATACAAATTATAGATACTCATT
GGACACAACCAGACCCGGATACGCCGGACGCCGCTGCGGGGGAGATCAAA
CTCGACTATGTGAAGACCGCAGAGGCCACCCATTCGTATCCGGTAACACG
GATCCTCTGGGAGCCGCCATCATCTCAGAAACAGTCTACCGATCTGTTGG
CCACATCTGGTGATCATCTGCGATTATGGTCGCTGCCAACGGCGCAACCC
GTACCAAGCTCCAACTCCATTACGCGGTCGGCCAGCCAACACGCACCGAC
AGCGAAACTGTCGCCGCTGGCTTTGCTCTCAAATTCCAAGTCACCCGAGC
ATACCGCTCCAATCACCTCATTGGACTGGAATACAATTTCCCCCAGTCTG
ATCATTACCTCCAGTATCGATACCACCTGCACGATCTGGGATATTCCCAC
CCTTACCGCCAAGACACAGCTGATCGCACATGACAAAGAGGTATACGATG
TTCGATTCTGTGCGAATAGCGTGGACGTCTTTGTCAGCTGTGGCGCTGAT
GGTAGTGTGCGCATGTTCGATCTCCGCAGCCTAGAACATAGCACTATCAT
CTACGAGCCCACCGAGAAACATGAGAAGGATGTCGAATCCTACGCAGCCT
TTTGACTCTCGGCGGGCGACAAGCTACGGTCGACCTGAGGAGCTCCATAT
TCCATCTGCGGGCCCCAATCTGCAGCGACAATCGATGTCTCACGAATACC
CCGCCGGTCAAGACAACCCTGTCCCTTCTATCAACGTTCATTCATTGGGG
TCACAACCGGGTCAGTATGGTGGTGGTGGAAGCAGCGGCGCGAGCGGAGT
ACTCCCGGGAGCGCTTCAGCCGGGCAACGTCAACCGTCCACCTGCAGTAT
CAGTCAACACTGCACCTTCGGCGCTACCAACCCTACCAGAACTGAATACC
CCAATGCAGCCAACATCACAATCAGGACAACAGCCACCGTCTGCACAACA
ACAGCAAACGCCCCAACAGCAGCAGCCGAATGCCCGCGCCAGTATGGTCA
ACTCTCATGGGCATTCTAGATCCAGCCCAGCAGGGTTTGAGCAGCCAAAA
TACAGACAGCCAGGTTCCTCTCCAGGCTCTGCATATCCTCCCCATACTCC
CCAGGGTACAAAATACTCGCCGTTGGGTCTAGCCGACATCCGACCGACAG
GAGACCTTCTGGGTGACCCAATCACCAGCTCCGGAATGGCACCGTTCAAC
GGGGATAATCCGGTACCTACCAATAGCAACTACATTGCTCCTTGGCCCAT
ATATTCTATGGATTGGTGTAAATGGCCTATTACGGGGAGCTCCAGCTCGT
TCGGGGGCAAAATCGCCTTGGGAAGCTACCTAGAGGACAACCACAACTAC
CATCGCCCCATGATTCCCACCTTCTTGCCACTTTCTCGCAAGATTCCAAC
ATTGTCCGGGTTCTAGACGTCCGGCAGCCTGGACAGGCTCTTCTTGAACT
GAAGGGCCACGGCTCCTCCATCAACTGCGTTGAGTGGTCGCCCAACCGCC
GCGGAGTCCTGGCTTCTGGTGCGGACGACTGCTTCGTACTTCTGTGGGAC
CTCATCAACCAGCACAATGCGGCTCCTGTGCCTCCCATGCCTCCCGTCCC
GCATAATGCGGGCACGCCCGCGACACCCAGTGAGCGAGGTCCAGCCGCCG
TGTGGCTCTGCGACAACGAAGTGTCGAACATTAGCTGGTCGCCGCAGGGC
GGTACCACGCCTGCCGGGCATCCGCGCGACTGGCTCGGGGTCTGCGGTGG
ACGTGGACTATGGGGAGTGGCACTGTAGTCCCCACTCCGGGCAATGGCAG
TCCTTCTGGGCAAGCCCAGCCCGTATGGCCCCCGCCTCTACTACGCATCG
CTGATACAAATTATAGATACTCATTGGACACAACCAGACCCGGATACGCC
GGACGCCGCTGCGGGGGAGATCAAACTCGACTATGTGAAGACCGCAGAGG
CCACCCATTCGTATCCGGTAACACGGATCCTCTGGGAGCCGCCATCATCT
CAGAAACAGTCTACCGATCTGTTGGCCACATCTGGTGATCATCTGCGATT
ATGGTCGCTGCCAACGGCGCAACCCGTACCAAGCTCCAACTCCATTACGC
GGTCGGCCAGCCAACACGCACCGACAGCGAAACTGTCGCCGCTGGCTTTG
CTCTCAAATTCCAAGTCACCCGAGCATACCGCTCCAATCACCTCATTGGA
CTGGAATACAATTTCCCCCAGTCTGATCATTACCTCCAGTATCGATACCA
CCTGCACGATCTGGGATATTCCCACCCTTACCGCCAAGACACAGCTGATC
GCACATGACAAAGAGGTATACGATGTTCGATTCTGTGCGAATAGCGTGGA
CGTCTTTGTCAGCTGTGGCGCTGATGGTAGTGTGCGCATGTTCGATCTCC
GCAGCCTAGAACATAGCACTATCATCTACGAGCCCACCGAGAAACATGAG
AAGGATGTCGAATCCTACGCAGCCTTTTGACTCTCGGCGGGCGACAAGCT
ACGGTCGACCTGAGGAGCTCCATATTCCATCTGCGGGCCCCAATCTGCAG
CGACAATCGATGTCTCACGAATACCCCGCCGGTCAAGACAACCCTGTCCC
TTCTATCAACGTTCATTCATTGGGGTCACAACCGGGTCAGTATGGTGGTG
GTGGAAGCAGCGGCGCGAGCGGAGTACTCCCGGGAGCGCTTCAGCCGGGC
AACGTCAACCGTCCACCTGCAGTATCAGTCAACACTGCACCTTCGGCGCT
ACCAACCCTACCAGAACTGAATACCCCAATGCAGCCAACATCACAATCAG
GACAACAGCCACCGTCTGCACAACAACAGCAAACGCCCCAACAGCAGCAG
CCGAATGCCCGCGCCAGTATGGTCAACTCTCATGGGCATTCTAGATCCAG
CCCAGCAGGGTTTGAGCAGCCAAAATACAGACAGCCAGGTTCCTCTCCAG
GCTCTGCATATCCTCCCCATACTCCCCAGGGTACAAAATACTCGCCGTTG
GGTCTAGCCGACATCCGACCGACAGGAGACCTTCTGGGTGACCCAATCAC
CAGCTCCGGAATGGCACCGTTCAACGGGGATAATCCGGTACCTACCAATA
GCAACTACATTGCTCCTTGGCCCATATATTCTATGGATTGGTGTAAATGG
CCTATTACGGGGAGCTCCAGCTCGTTCGGGGGCAAAATCGCCTTGGGAAG
CTACCTAGAGGACAACCACAACTACCATCGCCCCATGATTCCCACCTTCT
TGCCACTTTCTCGCAAGATTCCAACATTGTCCGGGTTCTAGACGTCCGGC
AGCCTGGACAGGCTCTTCTTGAACTGAAGGGCCACGGCTCCTCCATCAAC
TGCGTTGAGTGGTCGCCCAACCGCCGCGGAGTCCTGGCTTCTGGTGCGGA
CGACTGCTTCGTACTTCTGTGGGACCTCATCAACCAGCACAATGCGGCTC
CTGTGCCTCCCATGCCTCCCGTCCCGCATAATGCGGGCACGCCCGCGACA
CCCAGTGAGCGAGGTCCAGCCGCCGTGTGGCTCTGCGACAACGAAGTGTC
GAACATTAGCTGGTCGCCGCAGGGCGGTACCACGCCTGCCGGGCATCCGC
GCGACTGGCTCGGGGTCTGCGGTGGACGTGGACTATGGGGAGTGGCACTG
TAGTCCCCACTCCGGGCAATGGCAGTCCTTCTGGGCAAGCCCAGCCCGTA
TGGCCCCCGCCTCTACTACGCATCGCTGATACAAATTATAGATACTCATT
GGACACAACCAGACCCGGATACGCCGGACGCCGCTGCGGGGGAGATCAAA
CTCGACTATGTGAAGACCGCAGAGGCCACCCATTCGTATCCGGTAACACG
GATCCTCTGGGAGCCGCCATCATCTCAGAAACAGTCTACCGATCTGTTGG
CCACATCTGGTGATCATCTGCGATTATGGTCGCTGCCAACGGCGCAACCC
GTACCAAGCTCCAACTCCATTACGCGGTCGGCCAGCCAACACGCACCGAC
AGCGAAACTGTCGCCGCTGGCTTTGCTCTCAAATTCCAAGTCACCCGAGC
ATACCGCTCCAATCACCTCATTGGACTGGAATACAATTTCCCCCAGTCTG
ATCATTACCTCCAGTATCGATACCACCTGCACGATCTGGGATATTCCCAC
CCTTACCGCCAAGACACAGCTGATCGCACATGACAAAGAGGTATACGATG
TTCGATTCTGTGCGAATAGCGTGGACGTCTTTGTCAGCTGTGGCGCTGAT
GGTAGTGTGCGCATGTTCGATCTCCGCAGCCTAGAACATAGCACTATCAT
CTACGAGCCCACCGAGAAACATGAGAAGGATGTCGAATCCTACGCAGCCT
TTTGACTCTCGGCGGGCGACAAGCTACGGTCGACCTGAGGAGCTCCATAT
TCCATCTGCGGGCCCCAATCTGCAGCGACAATCGATGTCTCACGAATACC
CCGCCGGTCAAGACAACCCTGTCCCTTCTATCAACGTTCATTCATTGGGG
TCACAACCGGGTCAGTATGGTGGTGGTGGAAGCAGCGGCGCGAGCGGAGT
ACTCCCGGGAGCGCTTCAGCCGGGCAACGTCAACCGTCCACCTGCAGTAT
CAGTCAACACTGCACCTTCGGCGCTACCAACCCTACCAGAACTGAATACC
CCAATGCAGCCAACATCACAATCAGGACAACAGCCACCGTCTGCACAACA
ACAGCAAACGCCCCAACAGCAGCAGCCGAATGCCCGCGCCAGTATGGTCA
ACTCTCATGGGCATTCTAGATCCAGCCCAGCAGGGTTTGAGCAGCCAAAA
TACAGACAGCCAGGTTCCTCTCCAGGCTCTGCATATCCTCCCCATACTCC
CCAGGGTACAAAATACTCGCCGTTGGGTCTAGCCGACATCCGACCGACAG
GAGACCTTCTGGGTGACCCAATCACCAGCTCCGGAATGGCACCGTTCAAC
GGGGATAATCCGGTACCTACCAATAGCAACTACATTGCTCCTTGGCCCAT
ATATTCTATGGATTGGTGTAAATGGCCTATTACGGGGAGCTCCAGCTCGT
TCGGGGGCAAAATCGCCTTGGGAAGCTACCTAGAGGACAACCACAACTAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262J7K |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | WD domain G-beta repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:891649..893709 - |
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