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CAN33_52550-T1, CAN33_52550-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52550-T1
Unique NameCAN33_52550-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1565149..1566221+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52550-T1 ID=CAN33_52550-T1|Name=CAN33_52550-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1073bp|location=Sequence derived from alignment at NKJJ01000020.1:1565149..1566221+ (Aspergillus niger FDAARGOS_311)
ATGTCTTCAGACTACATCCCCGCCGATCAAATCGACTCCACCTTCGCCCA
CACCACCAACCTCGCCTCCGCCGCCCTCAACAGCACCGTCCTCTCCTGCT
CCAACGAATACTTCGCCGCCGCCTCCAACCTCCTCACCCCGACCCCTCCC
ATCAACCGCCCCGGCGTCTTCATCCACACAGGAGCCTGGTACGACGGCTG
GGAAACCCGCCGCCACAACCCCGCCCCTACGACTGGGCCGTCATCAAGCT
GGGCGTCTCCAGCGCCCACATCTACGGCGTCGAAGTCAACACCGGCTTCT
TCATCGGTAACTACGGCGAGAAGGCCTCCCTGCAAGCGACCTACGCGCCC
AACACTCCCGACTCGGAAGTCGCCGATGAGAAATACACTGGCTGGACGAC
GATTCTCCCGCCCGTCGAGTGCGGGCCGTCGCAGCGGCGCGCGTGGAAGC
TGGACCCGGAGGTGCACGGCAAGGCATTTACGCATGTGCGGTTGTTGATG
TATCCCGATGGAGGGTTTGGACGGTTGAGGGTCTACGGGAAGGCGATTCC
GGGAGATGTTAAGGTGGAGGGAGGTGAGGAGGAATTGAGTTCTGCGCTTG
TCGGGGGTGTGGCGCTGGCTGCGTCGGATCAGCATTTCACGCCGTGTTCG
AATCTGTTGTTGCCTGGGAGGGGTAAGGATATGGGGGATGGGTGGGAGAC
GGCGAGGTCCAGGGCCAAGGGTCATGTTGATTGGGCGATTGTGAAGTTGG
GGTTGGTGGGGAGTGTGAGTAAGGTGGTGGTGGATACGAAGGATTTCAGG
GGGAACTTCCCTAGGGAGGTGCGCGTGCATGGGCTTGTTGAGGGGAGTGT
GAAGGGCGAGGAGGAGCCTACGCATGATCATCCTGGGTGGGTGGAGTTGG
TTAAGGGTGATAGGCCTTGTCGGGCGGATACGGAGCATGTCTTTGAGGGA
CAGGATTTGGCTGCTGGTGGGGAGGATACGAGGGCGTTTACGCATGTTAA
GTTGACGTTGGTGCCGGATGGAGGTGTCAAGCGGTTGAGGGTGTTTGGGA
AGCGGAAGGCTGTTGCTGCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1565149..1566221+

>CAN33_52550-T1 ID=CAN33_52550-T1|Name=CAN33_52550-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1998bp|location=Sequence derived from alignment at NKJJ01000020.1:1565149..1566221+ (Aspergillus niger FDAARGOS_311)
ATGTCTTCAGACTACATCCCCGCCGATCAAATCGACTCCACCTTCGCCCA
CACCACCAACCTCGCCTCCGCCGCCCTCAACAGCACCGTCCTCTCCTGCT
CCAACGAATACTTCGCCGCCGCCTCCAACCTCCTCACCCCGACCCCTCCC
ATCAACCGCCCCGGCGTCTTCATCCACACAGGAGCCTGCGCCCACATCTA
CGGCGTCGAAGTCAACACCGGCTTCTTCATCGGTAACTACGGCGAGAAGG
CCTCCCTGCAAGCGACCTACGCGCCCAACACTCCCGACTCGGAAGTCGCC
GATGAGAAATACACTGGCTGGACGACGATTCTCCCGCCCGTCGAGTGCGG
GCCGTCGCAGCGGCGCGCGTGGAAGCTGGACCCGGAGGTGCACGGCAAGG
CATTTACGCATGTGCGGTTGTTGATGTATCCCGATGGAGGGTTTGGACGG
TTGAGGGTCTACGGGAAGGCGATTCCGGGAGATGTTAAGGTGGAGGGAGG
TGAGGAGGAATTGAGTTCTGCGCTTGTCGGGGGTGTGGCGCTGGCTGCGT
CGGATCAGCATTTCACGCCGTGTTCGAATCTGTTGTTGCCTGGGAGGGGT
AAGGATATGGGGGATGGGTGGGAGACGGCGAGGTCCAGGGCCAAGGGTCA
TGTTGATTGGGCGATTGTGAAGTTGGGGTTGGTGGGGAGTGTGAGTAAGG
TGGTGGTGGATACGAAGGATTTCAGGGGGAACTTCCCTAGGGAGGTGCGC
GTGCATGGGCTTGTTGAGGGGAGTGTGAAGGGCGAGGAGGAGCCTACGCA
TGATCATCCTGGGTGGGTGGAGTTGGTTAAGGGTGATAGGCCTTGTCGGG
CGGATACGGAGCATGTCTTTGAGGGACAGGATTTGGCTGCTGGTGGGGAG
GATACGAGGGCGTTTACGCATGTTAAGTTGACGTTGGTGCCGGATGGAGG
TGTCAAGCGGTTGAGGGTGTTTGGGAAGCGGAAGGCTGTTGCTGCTTGAA
TGTCTTCAGACTACATCCCCGCCGATCAAATCGACTCCACCTTCGCCCAC
ACCACCAACCTCGCCTCCGCCGCCCTCAACAGCACCGTCCTCTCCTGCTC
CAACGAATACTTCGCCGCCGCCTCCAACCTCCTCACCCCGACCCCTCCCA
TCAACCGCCCCGGCGTCTTCATCCACACAGGAGCCTGCGCCCACATCTAC
GGCGTCGAAGTCAACACCGGCTTCTTCATCGGTAACTACGGCGAGAAGGC
CTCCCTGCAAGCGACCTACGCGCCCAACACTCCCGACTCGGAAGTCGCCG
ATGAGAAATACACTGGCTGGACGACGATTCTCCCGCCCGTCGAGTGCGGG
CCGTCGCAGCGGCGCGCGTGGAAGCTGGACCCGGAGGTGCACGGCAAGGC
ATTTACGCATGTGCGGTTGTTGATGTATCCCGATGGAGGGTTTGGACGGT
TGAGGGTCTACGGGAAGGCGATTCCGGGAGATGTTAAGGTGGAGGGAGGT
GAGGAGGAATTGAGTTCTGCGCTTGTCGGGGGTGTGGCGCTGGCTGCGTC
GGATCAGCATTTCACGCCGTGTTCGAATCTGTTGTTGCCTGGGAGGGGTA
AGGATATGGGGGATGGGTGGGAGACGGCGAGGTCCAGGGCCAAGGGTCAT
GTTGATTGGGCGATTGTGAAGTTGGGGTTGGTGGGGAGTGTGAGTAAGGT
GGTGGTGGATACGAAGGATTTCAGGGGGAACTTCCCTAGGGAGGTGCGCG
TGCATGGGCTTGTTGAGGGGAGTGTGAAGGGCGAGGAGGAGCCTACGCAT
GATCATCCTGGGTGGGTGGAGTTGGTTAAGGGTGATAGGCCTTGTCGGGC
GGATACGGAGCATGTCTTTGAGGGACAGGATTTGGCTGCTGGTGGGGAGG
ATACGAGGGCGTTTACGCATGTTAAGTTGACGTTGGTGCCGGATGGAGGT
GTCAAGCGGTTGAGGGTGTTTGGGAAGCGGAAGGCTGTTGCTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000256allantoin catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004037allantoicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52550CAN33_52550Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52550-T1.exon1CAN33_52550-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_52550-T1.exon2CAN33_52550-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52550-T1.cdsCAN33_52550-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52550-T1CAN33_52550-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR005164
DBxrefInterPro:IPR008979
DBxrefInterPro:IPR015908
DBxrefPFAM:PF03561
ProductAllantoicase repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1565149..1566221 +
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