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CAN33_52665-T1, CAN33_52665-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52665-T1
Unique NameCAN33_52665-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1673961..1674362+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52665-T1 ID=CAN33_52665-T1|Name=CAN33_52665-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=402bp|location=Sequence derived from alignment at NKJJ01000020.1:1673961..1674362+ (Aspergillus niger FDAARGOS_311)
ATGCCTTTCACTGCCTCGTAAGTCTTGCAACCCCTCGCGACGTCATCTTT
TGGCGATTTCCTATCCAGTCGCGCGCATACCTGGACCTTGACGAGCTGGA
GCTGTCTTGGGATAGCTTGCGATCCCAATAATCTGAATGACGAGAGCATA
GTGTCGTGGGTATGCTAACGCCGTTGGGACCATAGGGATATCTGCAAGAT
CATCTTTGCGATCATCTTGCCGCCACTGGGTGTTTTCCTGGAGCGAGGAT
GCGGTGCTGATTTCCTGATCAACATCTGTTTGACAATCCTGGGTTGGCTC
CCTGGTGTCATTCATGCCTTGTACGTGGCCCGCCAAGTGATGGATTTCCG
GAGATTCCGAGGCTAACTCGTTTCGTTCAGCTATATCATATTCAAATACT
AG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1673961..1674362+

>CAN33_52665-T1 ID=CAN33_52665-T1|Name=CAN33_52665-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=522bp|location=Sequence derived from alignment at NKJJ01000020.1:1673961..1674362+ (Aspergillus niger FDAARGOS_311)
ATGCCTTTCACTGCCTCGGATATCTGCAAGATCATCTTTGCGATCATCTT
GCCGCCACTGGGTGTTTTCCTGGAGCGAGGATGCGGTGCTGATTTCCTGA
TCAACATCTGTTTGACAATCCTGGGTTGGCTCCCTGGTGTCATTCATGCC
TTCTATATCATATTCAAATACTAGATGCCTTTCACTGCCTCGGATATCTG
CAAGATCATCTTTGCGATCATCTTGCCGCCACTGGGTGTTTTCCTGGAGC
GAGGATGCGGTGCTGATTTCCTGATCAACATCTGTTTGACAATCCTGGGT
TGGCTCCCTGGTGTCATTCATGCCTTCTATATCATATTCAAATACTAGAT
GCCTTTCACTGCCTCGGATATCTGCAAGATCATCTTTGCGATCATCTTGC
CGCCACTGGGTGTTTTCCTGGAGCGAGGATGCGGTGCTGATTTCCTGATC
AACATCTGTTTGACAATCCTGGGTTGGCTCCCTGGTGTCATTCATGCCTT
CTATATCATATTCAAATACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PMP3_2CAN33_52665Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52665-T1.exon1CAN33_52665-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_52665-T1.exon2CAN33_52665-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52665-T1.exon3CAN33_52665-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52665-T1.cdsCAN33_52665-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52665-T1CAN33_52665-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000201.4
NoteantiSMASH:Cluster_10000201.5
NoteEggNog:ENOG41
DBxrefInterPro:IPR000612
DBxrefPFAM:PF01679
Productplasma membrane proteolipid Pmp3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1673961..1674362 +
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