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CAN33_52705-T1, CAN33_52705-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52705-T1
Unique NameCAN33_52705-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1690444..1691649+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52705-T1 ID=CAN33_52705-T1|Name=CAN33_52705-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1206bp|location=Sequence derived from alignment at NKJJ01000020.1:1690444..1691649+ (Aspergillus niger FDAARGOS_311)
ATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGACGAGGA
GGCCGCGGTCCGCGATGTAAGTTGACCCGTGCCCGCGCCAAGCGCAGAGA
CAAAACCGAAAGCAAAGCGCCGTTGTGTTAACAAGATGTACAGGAGCTTC
ACGATATTGTGCAGACGCTTGCTAGGAAGGGTACTTACCTACTCACCTAT
CCCTATATGAATTCTCAGAATTGGGATAATCTCGATTTGAACTTCGTCGA
CTGACTATTAGGATCGGATTATAGGAAGATCTACCCAGGCTATTCTGTCG
CGAGCTCATTCTACTCCCACTGATCAGTGTATGATTAACTCCTCTCTTCA
TATCCTGATGACCACGTAGGCAAAATAGCTAATATGGACAGTGAAACCCG
TTCTCGATGACGCAACCAAGGAGATCATCGCCCAGAGGGATGAAGTATCT
CGGTTGAAGACTGTGGCGGACAAGCACCCGTTTTACAAGTACAATGGGGT
GTGGACGCGCGAGTTGCAGAACCTTGTGCGTGCCCCTTCTGTTACTGGGG
TTTGTTTATTGCAGACGAGAGCTAATTAGCCAATCAATAGGTCTCGTCGA
TCGAGCTGTGCGCTTGGCTGGGCGGACTGGAAGAGTACAAGACGAACAGC
TCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCTTGGGTGGTAT
GTTCTCACTTCCTTGTATTCATTAACAGTTTCGAATTGTGTAGTGGATTC
GATTCTAATTAGGATGATATCTAGTCCCCGTGAATCTCAAGGAACAGGAT
GCCTTCCATCTCACTATTGAGGAGTATTTGCTTGCGCTAATTTCCATGGT
CGAGGAGCTGGTCAGTTTCTCCGTGCCCCATATTGATTTGTTATTGGACT
ACCATTTGCTGATAGAAGATGTGGCAGGCCCGTCTGGCTGTCAACTCGGT
CACTCTGGGTGACTACACCCGGCCGGTGCAAATTGGCAACTTCATCAAGG
ATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGATATTTTGCGG
AAGAGGAGTGATGGAATTAAATACAGTGTAAGTTTCTATCCGTGGGGTTG
TAGATTCAGGGATGCTAATGCCGTGGTACAGGTTAAGAAGGTGGAGGATG
TCGTTTACGATCTCTCTTTGCGCAACTTGATTCCCAAGGGTAGCGCTGCG
GCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1690444..1691649+

>CAN33_52705-T1 ID=CAN33_52705-T1|Name=CAN33_52705-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5664bp|location=Sequence derived from alignment at NKJJ01000020.1:1690444..1691649+ (Aspergillus niger FDAARGOS_311)
ATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGACGAGGA
GGCCGCGGTCCGCGATGAGCTTCACGATATTGTGCAGACGCTTGCTAGGA
AGGGAAGATCTACCCAGGCTATTCTGTCGCGAGCTCATTCTACTCCCACT
GATCAGTTGAAACCCGTTCTCGATGACGCAACCAAGGAGATCATCGCCCA
GAGGGATGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCACCCGTTTT
ACAAGTACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTCTCGTCG
ATCGAGCTGTGCGCTTGGCTGGGCGGACTGGAAGAGTACAAGACGAACAG
CTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCTTGGGTGTCC
CCGTGAATCTCAAGGAACAGGATGCCTTCCATCTCACTATTGAGGAGTAT
TTGCTTGCGCTAATTTCCATGGTCGAGGAGCTGGCCCGTCTGGCTGTCAA
CTCGGTCACTCTGGGTGACTACACCCGGCCGGTGCAAATTGGCAACTTCA
TCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGATATT
TTGCGGAAGAGGAGTGATGGAATTAAATACAGTGTTAAGAAGGTGGAGGA
TGTCGTTTACGATCTCTCTTTGCGCAACTTGATTCCCAAGGGTAGCGCTG
CGGCGTAAATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATT
GACGAGGAGGCCGCGGTCCGCGATGAGCTTCACGATATTGTGCAGACGCT
TGCTAGGAAGGGAAGATCTACCCAGGCTATTCTGTCGCGAGCTCATTCTA
CTCCCACTGATCAGTTGAAACCCGTTCTCGATGACGCAACCAAGGAGATC
ATCGCCCAGAGGGATGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCA
CCCGTTTTACAAGTACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTG
TCTCGTCGATCGAGCTGTGCGCTTGGCTGGGCGGACTGGAAGAGTACAAG
ACGAACAGCTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCTT
GGGTGTCCCCGTGAATCTCAAGGAACAGGATGCCTTCCATCTCACTATTG
AGGAGTATTTGCTTGCGCTAATTTCCATGGTCGAGGAGCTGGCCCGTCTG
GCTGTCAACTCGGTCACTCTGGGTGACTACACCCGGCCGGTGCAAATTGG
CAACTTCATCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGA
ATGATATTTTGCGGAAGAGGAGTGATGGAATTAAATACAGTGTTAAGAAG
GTGGAGGATGTCGTTTACGATCTCTCTTTGCGCAACTTGATTCCCAAGGG
TAGCGCTGCGGCGTAAATGATCGATCACAACATCTTCGAAGACCTGCAGG
CCAAGATTGACGAGGAGGCCGCGGTCCGCGATGAGCTTCACGATATTGTG
CAGACGCTTGCTAGGAAGGGAAGATCTACCCAGGCTATTCTGTCGCGAGC
TCATTCTACTCCCACTGATCAGTTGAAACCCGTTCTCGATGACGCAACCA
AGGAGATCATCGCCCAGAGGGATGAAGTATCTCGGTTGAAGACTGTGGCG
GACAAGCACCCGTTTTACAAGTACAATGGGGTGTGGACGCGCGAGTTGCA
GAACCTTGTCTCGTCGATCGAGCTGTGCGCTTGGCTGGGCGGACTGGAAG
AGTACAAGACGAACAGCTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGA
AATTTCTTGGGTGTCCCCGTGAATCTCAAGGAACAGGATGCCTTCCATCT
CACTATTGAGGAGTATTTGCTTGCGCTAATTTCCATGGTCGAGGAGCTGG
CCCGTCTGGCTGTCAACTCGGTCACTCTGGGTGACTACACCCGGCCGGTG
CAAATTGGCAACTTCATCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAA
CCTGAAGAATGATATTTTGCGGAAGAGGAGTGATGGAATTAAATACAGTG
TTAAGAAGGTGGAGGATGTCGTTTACGATCTCTCTTTGCGCAACTTGATT
CCCAAGGGTAGCGCTGCGGCGTAAATGATCGATCACAACATCTTCGAAGA
CCTGCAGGCCAAGATTGACGAGGAGGCCGCGGTCCGCGATGAGCTTCACG
ATATTGTGCAGACGCTTGCTAGGAAGGGAAGATCTACCCAGGCTATTCTG
TCGCGAGCTCATTCTACTCCCACTGATCAGTTGAAACCCGTTCTCGATGA
CGCAACCAAGGAGATCATCGCCCAGAGGGATGAAGTATCTCGGTTGAAGA
CTGTGGCGGACAAGCACCCGTTTTACAAGTACAATGGGGTGTGGACGCGC
GAGTTGCAGAACCTTGTCTCGTCGATCGAGCTGTGCGCTTGGCTGGGCGG
ACTGGAAGAGTACAAGACGAACAGCTCCTCTTCGTTTCTGACGATAGAAG
AGGTTGGAAATTTCTTGGGTGTCCCCGTGAATCTCAAGGAACAGGATGCC
TTCCATCTCACTATTGAGGAGTATTTGCTTGCGCTAATTTCCATGGTCGA
GGAGCTGGCCCGTCTGGCTGTCAACTCGGTCACTCTGGGTGACTACACCC
GGCCGGTGCAAATTGGCAACTTCATCAAGGATTTGTTTGCGGGCTTCCAG
TTGCTGAACCTGAAGAATGATATTTTGCGGAAGAGGAGTGATGGAATTAA
ATACAGTGTTAAGAAGGTGGAGGATGTCGTTTACGATCTCTCTTTGCGCA
ACTTGATTCCCAAGGGTAGCGCTGCGGCGTAAATGATCGATCACAACATC
TTCGAAGACCTGCAGGCCAAGATTGACGAGGAGGCCGCGGTCCGCGATGA
GCTTCACGATATTGTGCAGACGCTTGCTAGGAAGGGAAGATCTACCCAGG
CTATTCTGTCGCGAGCTCATTCTACTCCCACTGATCAGTTGAAACCCGTT
CTCGATGACGCAACCAAGGAGATCATCGCCCAGAGGGATGAAGTATCTCG
GTTGAAGACTGTGGCGGACAAGCACCCGTTTTACAAGTACAATGGGGTGT
GGACGCGCGAGTTGCAGAACCTTGTCTCGTCGATCGAGCTGTGCGCTTGG
CTGGGCGGACTGGAAGAGTACAAGACGAACAGCTCCTCTTCGTTTCTGAC
GATAGAAGAGGTTGGAAATTTCTTGGGTGTCCCCGTGAATCTCAAGGAAC
AGGATGCCTTCCATCTCACTATTGAGGAGTATTTGCTTGCGCTAATTTCC
ATGGTCGAGGAGCTGGCCCGTCTGGCTGTCAACTCGGTCACTCTGGGTGA
CTACACCCGGCCGGTGCAAATTGGCAACTTCATCAAGGATTTGTTTGCGG
GCTTCCAGTTGCTGAACCTGAAGAATGATATTTTGCGGAAGAGGAGTGAT
GGAATTAAATACAGTGTTAAGAAGGTGGAGGATGTCGTTTACGATCTCTC
TTTGCGCAACTTGATTCCCAAGGGTAGCGCTGCGGCGTAAATGATCGATC
ACAACATCTTCGAAGACCTGCAGGCCAAGATTGACGAGGAGGCCGCGGTC
CGCGATGAGCTTCACGATATTGTGCAGACGCTTGCTAGGAAGGGAAGATC
TACCCAGGCTATTCTGTCGCGAGCTCATTCTACTCCCACTGATCAGTTGA
AACCCGTTCTCGATGACGCAACCAAGGAGATCATCGCCCAGAGGGATGAA
GTATCTCGGTTGAAGACTGTGGCGGACAAGCACCCGTTTTACAAGTACAA
TGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTCTCGTCGATCGAGCTGT
GCGCTTGGCTGGGCGGACTGGAAGAGTACAAGACGAACAGCTCCTCTTCG
TTTCTGACGATAGAAGAGGTTGGAAATTTCTTGGGTGTCCCCGTGAATCT
CAAGGAACAGGATGCCTTCCATCTCACTATTGAGGAGTATTTGCTTGCGC
TAATTTCCATGGTCGAGGAGCTGGCCCGTCTGGCTGTCAACTCGGTCACT
CTGGGTGACTACACCCGGCCGGTGCAAATTGGCAACTTCATCAAGGATTT
GTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGATATTTTGCGGAAGA
GGAGTGATGGAATTAAATACAGTGTTAAGAAGGTGGAGGATGTCGTTTAC
GATCTCTCTTTGCGCAACTTGATTCCCAAGGGTAGCGCTGCGGCGTAAAT
GATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGACGAGGAGG
CCGCGGTCCGCGATGAGCTTCACGATATTGTGCAGACGCTTGCTAGGAAG
GGAAGATCTACCCAGGCTATTCTGTCGCGAGCTCATTCTACTCCCACTGA
TCAGTTGAAACCCGTTCTCGATGACGCAACCAAGGAGATCATCGCCCAGA
GGGATGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCACCCGTTTTAC
AAGTACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTCTCGTCGAT
CGAGCTGTGCGCTTGGCTGGGCGGACTGGAAGAGTACAAGACGAACAGCT
CCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCTTGGGTGTCCCC
GTGAATCTCAAGGAACAGGATGCCTTCCATCTCACTATTGAGGAGTATTT
GCTTGCGCTAATTTCCATGGTCGAGGAGCTGGCCCGTCTGGCTGTCAACT
CGGTCACTCTGGGTGACTACACCCGGCCGGTGCAAATTGGCAACTTCATC
AAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGATATTTT
GCGGAAGAGGAGTGATGGAATTAAATACAGTGTTAAGAAGGTGGAGGATG
TCGTTTACGATCTCTCTTTGCGCAACTTGATTCCCAAGGGTAGCGCTGCG
GCGTAAATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGA
CGAGGAGGCCGCGGTCCGCGATGAGCTTCACGATATTGTGCAGACGCTTG
CTAGGAAGGGAAGATCTACCCAGGCTATTCTGTCGCGAGCTCATTCTACT
CCCACTGATCAGTTGAAACCCGTTCTCGATGACGCAACCAAGGAGATCAT
CGCCCAGAGGGATGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCACC
CGTTTTACAAGTACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTC
TCGTCGATCGAGCTGTGCGCTTGGCTGGGCGGACTGGAAGAGTACAAGAC
GAACAGCTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCTTGG
GTGTCCCCGTGAATCTCAAGGAACAGGATGCCTTCCATCTCACTATTGAG
GAGTATTTGCTTGCGCTAATTTCCATGGTCGAGGAGCTGGCCCGTCTGGC
TGTCAACTCGGTCACTCTGGGTGACTACACCCGGCCGGTGCAAATTGGCA
ACTTCATCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAAT
GATATTTTGCGGAAGAGGAGTGATGGAATTAAATACAGTGTTAAGAAGGT
GGAGGATGTCGTTTACGATCTCTCTTTGCGCAACTTGATTCCCAAGGGTA
GCGCTGCGGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016070RNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003697single-stranded DNA binding
GO:0043565sequence-specific DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52705CAN33_52705Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52705-T1CAN33_52705-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52705-T1.exon1CAN33_52705-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_52705-T1.exon2CAN33_52705-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52705-T1.exon3CAN33_52705-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_52705-T1.exon4CAN33_52705-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_52705-T1.exon5CAN33_52705-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_52705-T1.exon6CAN33_52705-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_52705-T1.exon7CAN33_52705-T1.exon7Aspergillus niger FDAARGOS_311exon
CAN33_52705-T1.exon8CAN33_52705-T1.exon8Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52705-T1.cdsCAN33_52705-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR036081
DBxrefInterPro:IPR033956
DBxrefInterPro:IPR016068
DBxrefInterPro:IPR002848
DBxrefInterPro:IPR016069
DBxrefPFAM:PF01997
ProductTranslin family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1690444..1691649 +
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