You are here

Home

CAN33_52775-T1, CAN33_52775-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52775-T1
Unique NameCAN33_52775-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1721200..1722943+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52775-T1 ID=CAN33_52775-T1|Name=CAN33_52775-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1744bp|location=Sequence derived from alignment at NKJJ01000020.1:1721200..1722943+ (Aspergillus niger FDAARGOS_311)
ATGTCCTCGACACCTCGGTCTAGTACTGTGCCACCAATGCTTACCTCTTC
GCCGCGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAG
AACACGATCTTCTCTCCACCCGTGGCCAACGCCTCGGGGGACTAATACGA
CGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAG
GCTTGAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGC
GCGCTAGGCGACTCATCGGCGAGAGCAGGCCTATTTATCGTTGGTATGCC
ATTTCCCCTCGTTTCACAGCTTAGTTAATATGTACTAAAGGGGAAATGCA
GGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCC
ATGTACGTCCCCGTCTATGGCTCCAACGCTGTGCGATCTGACACGGCAAC
AGGCGCGAGTATTACGAGCGCAACAACGATCTGATATCGCAATATGTCTT
TATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGTCTGATTGTGGACT
ATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCA
TATGACGCAACCTCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAAT
CAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGCGAGAACGAGACAT
CTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGAC
ATCATCCCCACAAACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCAC
TGTAGCAATATACGTCAACTTCATCGCCAACGTCCTCCTCCTAGTCGCAA
AGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTA
GTCGACGGGGCACTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAAC
CACCTTGATCCGTCGACAAGACCGCTCCCGATACCCGATCAGCCGTCGCC
GACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCT
TTCGTCCAAGTCGCACTCACATCCTTCACACGCCTCATTTCTTCCGACCG
CTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTCATGGCCAGCACAG
TTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCG
AGCGTCCAAGCACTAGCACAAGACGCCATGACGGACGTAATCTTCAACTT
GTTCAGTATTCTCTTCCCTCTCAGTAAGTTCTTCCTGCCCTCACCCTAAC
TTCTCTCAACCCAAACCACACCACTAACCAATACAACAAAAAGTCGGCTC
CCTGACCACAACCTGGTACATCGACCCGTTAGGCGGTCTTCTCCTGTCCC
TGTACATAATCTACAACTGGAGCGCCACAGCCAGCGAACACATCGGCCAT
CTAACAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGTACAT
GACGATGCGGTTCTCGAAAGCAATTCTCAAGATCCAAGATCTAAAGGCCT
ATTACGCAGGAGATCGGCTCAACGTCGAGGTGGATATTGTCCTGGACCCG
AAGACCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATAT
GGTGGAGAGTGTGCCTACGGTGGATAGGGCATTCGTGCATATTGATTACG
ATCCGTGGAATATTCCGAGTCATATGAACCAGATTGAGGGGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:1721200..1722943+

>CAN33_52775-T1 ID=CAN33_52775-T1|Name=CAN33_52775-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6264bp|location=Sequence derived from alignment at NKJJ01000020.1:1721200..1722943+ (Aspergillus niger FDAARGOS_311)
ATGTCCTCGACACCTCGGTCTAGTACTGTGCCACCAATGCTTACCTCTTC
GCCGCGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAG
AACACGATCTTCTCTCCACCCGTGGCCAACGCCTCGGGGGACTAATACGA
CGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAG
GCTTGAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGC
GCGCTAGGCGACTCATCGGCGAGAGCAGGCCTATTTATCGTTGGCAACAT
TTCTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCCATGCGCGA
GTATTACGAGCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACA
GATTGCTGGACTCCTCTCTCCCCCATCGTCTGATTGTGGACTATCACAGC
AACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGC
AACCTCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAA
CTCCCCGAAATCTCTATCGCATTCCCAGCGAGAACGAGACATCTCCACTC
CTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCC
CACAAACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAA
TATACGTCAACTTCATCGCCAACGTCCTCCTCCTAGTCGCAAAGATTATT
GCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGG
GGCACTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGA
TCCGTCGACAAGACCGCTCCCGATACCCGATCAGCCGTCGCCGACTCGAA
CCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCA
AGTCGCACTCACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCG
TCGATCTATCCCTCCCTTCCATCGCTGTCATGGCCAGCACAGTTATCGTC
AAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCA
AGCACTAGCACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTA
TTCTCTTCCCTCTCATCGGCTCCCTGACCACAACCTGGTACATCGACCCG
TTAGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCAC
AGCCAGCGAACACATCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAG
ACCACAGTATTCTGCTGTACATGACGATGCGGTTCTCGAAAGCAATTCTC
AAGATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGA
GGTGGATATTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCATGATG
TTGGGGAGAGTCTGCAGTATATGGTGGAGAGTGTGCCTACGGTGGATAGG
GCATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAA
CCAGATTGAGGGGTGAATGTCCTCGACACCTCGGTCTAGTACTGTGCCAC
CAATGCTTACCTCTTCGCCGCGATCGGATTCATTCATCCGGGCGAGACAA
CCAAGTCTTGACTTAGAACACGATCTTCTCTCCACCCGTGGCCAACGCCT
CGGGGGACTAATACGACGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATC
CTTATGACAGTGAAAGGCTTGAAGATTCCATTCAAGATCGCGGGGATAGG
CCTGTTGCTTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGCAGGCCTAT
TTATCGTTGGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGC
CAAAGGCCATGCGCGAGTATTACGAGCGCAACAACGATCTGATATCGCAA
TATGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGTCTGAT
TGTGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACG
GCCGGGCATATGACGCAACCTCCTACGGCACAGGAGATACCAAAGCATCC
GGTAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGCGAGAA
CGAGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCAC
CCCCAGACATCATCCCCACAAACGATGAGTTCGTCGACAGCAGCGACCGT
ATAGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTCCTCCTCCT
AGTCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGG
CCAGCTTAGTCGACGGGGCACTGGACTTCCTCAGCACAGCCATAGTCTGG
ATCACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATACCCGATCAG
CCGTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGG
TGACATCTTTCGTCCAAGTCGCACTCACATCCTTCACACGCCTCATTTCT
TCCGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTCATGGC
CAGCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTA
AGAACTCGAGCGTCCAAGCACTAGCACAAGACGCCATGACGGACGTAATC
TTCAACTTGTTCAGTATTCTCTTCCCTCTCATCGGCTCCCTGACCACAAC
CTGGTACATCGACCCGTTAGGCGGTCTTCTCCTGTCCCTGTACATAATCT
ACAACTGGAGCGCCACAGCCAGCGAACACATCGGCCATCTAACAGGCGCC
GCAGCATCACCCAAAGACCACAGTATTCTGCTGTACATGACGATGCGGTT
CTCGAAAGCAATTCTCAAGATCCAAGATCTAAAGGCCTATTACGCAGGAG
ATCGGCTCAACGTCGAGGTGGATATTGTCCTGGACCCGAAGACCAGACTC
CAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATATGGTGGAGAGTGT
GCCTACGGTGGATAGGGCATTCGTGCATATTGATTACGATCCGTGGAATA
TTCCGAGTCATATGAACCAGATTGAGGGGTGAATGTCCTCGACACCTCGG
TCTAGTACTGTGCCACCAATGCTTACCTCTTCGCCGCGATCGGATTCATT
CATCCGGGCGAGACAACCAAGTCTTGACTTAGAACACGATCTTCTCTCCA
CCCGTGGCCAACGCCTCGGGGGACTAATACGACGGCGCTCTCTCAGCGTC
CAAAGCGCCGATAATCCTTATGACAGTGAAAGGCTTGAAGATTCCATTCA
AGATCGCGGGGATAGGCCTGTTGCTTTTGAGCGCGCTAGGCGACTCATCG
GCGAGAGCAGGCCTATTTATCGTTGGCAACATTTCTATCAGGACCCTACT
ACGCTGAAGAAAATGCCAAAGGCCATGCGCGAGTATTACGAGCGCAACAA
CGATCTGATATCGCAATATGTCTTTATTGACAGATTGCTGGACTCCTCTC
TCCCCCATCGTCTGATTGTGGACTATCACAGCAACCAGCCAGGAGAGCCC
CCAGTCTCAACCAACGGCCGGGCATATGACGCAACCTCCTACGGCACAGG
AGATACCAAAGCATCCGGTAAAATCAAGAGAACTCCCCGAAATCTCTATC
GCATTCCCAGCGAGAACGAGACATCTCCACTCCTGCCCCCGATGATCGAA
GAACGAGTAGCATCACCCCCAGACATCATCCCCACAAACGATGAGTTCGT
CGACAGCAGCGACCGTATAGTCACTGTAGCAATATACGTCAACTTCATCG
CCAACGTCCTCCTCCTAGTCGCAAAGATTATTGCTATGACCATGACAAAC
TCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGGCACTGGACTTCCTCAG
CACAGCCATAGTCTGGATCACAACCACCTTGATCCGTCGACAAGACCGCT
CCCGATACCCGATCAGCCGTCGCCGACTCGAACCACTCAGCGTATTAGTC
TTCGCCGTCGTAATGGTGACATCTTTCGTCCAAGTCGCACTCACATCCTT
CACACGCCTCATTTCTTCCGACCGCTCCGTCGTCGATCTATCCCTCCCTT
CCATCGCTGTCATGGCCAGCACAGTTATCGTCAAGCTCATCTGCTGGTTC
TGGTGTCGACTGATTAAGAACTCGAGCGTCCAAGCACTAGCACAAGACGC
CATGACGGACGTAATCTTCAACTTGTTCAGTATTCTCTTCCCTCTCATCG
GCTCCCTGACCACAACCTGGTACATCGACCCGTTAGGCGGTCTTCTCCTG
TCCCTGTACATAATCTACAACTGGAGCGCCACAGCCAGCGAACACATCGG
CCATCTAACAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGT
ACATGACGATGCGGTTCTCGAAAGCAATTCTCAAGATCCAAGATCTAAAG
GCCTATTACGCAGGAGATCGGCTCAACGTCGAGGTGGATATTGTCCTGGA
CCCGAAGACCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGT
ATATGGTGGAGAGTGTGCCTACGGTGGATAGGGCATTCGTGCATATTGAT
TACGATCCGTGGAATATTCCGAGTCATATGAACCAGATTGAGGGGTGAAT
GTCCTCGACACCTCGGTCTAGTACTGTGCCACCAATGCTTACCTCTTCGC
CGCGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAGAA
CACGATCTTCTCTCCACCCGTGGCCAACGCCTCGGGGGACTAATACGACG
GCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAGGC
TTGAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGCGC
GCTAGGCGACTCATCGGCGAGAGCAGGCCTATTTATCGTTGGCAACATTT
CTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCCATGCGCGAGT
ATTACGAGCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACAGA
TTGCTGGACTCCTCTCTCCCCCATCGTCTGATTGTGGACTATCACAGCAA
CCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGCAA
CCTCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAACT
CCCCGAAATCTCTATCGCATTCCCAGCGAGAACGAGACATCTCCACTCCT
GCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCCCA
CAAACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAATA
TACGTCAACTTCATCGCCAACGTCCTCCTCCTAGTCGCAAAGATTATTGC
TATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGG
CACTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGATC
CGTCGACAAGACCGCTCCCGATACCCGATCAGCCGTCGCCGACTCGAACC
ACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCAAG
TCGCACTCACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCGTC
GATCTATCCCTCCCTTCCATCGCTGTCATGGCCAGCACAGTTATCGTCAA
GCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCAAG
CACTAGCACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTATT
CTCTTCCCTCTCATCGGCTCCCTGACCACAACCTGGTACATCGACCCGTT
AGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCACAG
CCAGCGAACACATCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAGAC
CACAGTATTCTGCTGTACATGACGATGCGGTTCTCGAAAGCAATTCTCAA
GATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGAGG
TGGATATTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCATGATGTT
GGGGAGAGTCTGCAGTATATGGTGGAGAGTGTGCCTACGGTGGATAGGGC
ATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAACC
AGATTGAGGGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006812cation transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52775CAN33_52775Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52775-T1.exon1CAN33_52775-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_52775-T1.exon2CAN33_52775-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52775-T1.exon3CAN33_52775-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_52775-T1.exon4CAN33_52775-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52775-T1.cdsCAN33_52775-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52775-T1CAN33_52775-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027469
DBxrefInterPro:IPR027470
DBxrefInterPro:IPR036837
DBxrefInterPro:IPR002524
DBxrefPFAM:PF16916
DBxrefPFAM:PF01545
ProductCation efflux family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1721200..1722943 +
Powered by Drupal