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CAN33_52780-T1, CAN33_52780-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52780-T1
Unique NameCAN33_52780-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1723925..1725811+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52780-T1 ID=CAN33_52780-T1|Name=CAN33_52780-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1887bp|location=Sequence derived from alignment at NKJJ01000020.1:1723925..1725811+ (Aspergillus niger FDAARGOS_311)
ATGTCTGATCCGGAGCCCTCTTCTGCACCATGCTCCTCCTCGCCGCCCTC
AACCCAGGCGTCTGACTCTACTGCTGCCCTCAATTACGCCTTCCTAGTAC
ACTCCCAAAAGACCTTAACTCAGAACCTTCCTCCACGCGTCGACAATAAA
TTGCTGGCACGGCAAAAGCGGCGTCGGACTAGGTATGCACGGAAACCAAT
TCCAGTCCTCATTGGCCCAATGGGTCTCGCTGCCAGTAGATCGCTAACAC
GTCACTGCTGTGGCCGTATAGCCCCGAAGACCACGCAATCCTTGAAGCCG
AGTATCAACGGAACCCGAAGCCAGACAAAACGGCCCGAGCCAGTATAGTC
AGTCGCGTCTCGTTGGGCGAGAAGGAAGTGCAAGTATGTCTGCAATATCC
ATGTAATACCTACACCTGATGTGCAATCTAATGTGTCTGAAAATCAGATC
TGGTTCCAAAATCGTCGTCAAAATGATCGCCGGAAATCGAAACCATTGCA
ACCTCATGAGCTTCTCGCGCCTCGGTCGGACGTGTCCGACGCGTCAAAAC
GGGTAGCCGATGACAACCTTCCGACGAAGCCAGGATCTTCGAGCGGGACA
GAGCAATCAGAGGGCAACTGCCAGGACAGGAACGTTGCTACACAATCACC
CGACCATGCGTCTTTTGAATCGGACGTGGTGCATGGAGACAATAATGAGC
TGGAGCAGTCAGGGTTAAGCTCTCAAACCAGCCTGGCTACTGAAGCTGTG
GAGGATTCGCAGAGAGCTTCAGACGAGACGATGCCGGAACAACAACCGCC
CCCGGTGCACGATGAAACTCATCTCGATGATTCCAACCCAGCTTCTGTTA
AGAGGAAACGATCATTTTCTGAGACCCGTGGCAATCGGCCGTTTATGCAG
GGAACATCAACACCTATGAAGTCTCCTCCATCCTTGCGGATATCGCTCTC
GTTTGACGGAGAAGCTATGGTACGCAAAGAAGACGAGCTCACGCCATCTC
CTCCGAAAGGACGAAATGCCCTGCGGATCGCCATGTCCTCTGATGGAAAA
GCCGTGATCCGTGCTGATGGCGAGCCGTCTCCGTCAAAGAACCGCATTTC
TATGTTCTCAGCGCGTAAGCCCAGGCTTGCAGGGCTTCGAAGGAGCAACA
GTGCCGCGGCATTTAGTACGCCACGTGGTGGTTCCATGGAGACTGAAAAG
TTGTTTGGAAGATCAAGAGATCCTCGCAACTGGGAATCGTTCTTTGACAC
CGATGCAAGAAGTGCACTTTCTACTCCGACCAGCTCCCAAAGCGCACCGA
ACGCTGGCTCTCCCGCTTTGTTCCGCGCACGTGGTCAGCGTTCACTAACG
AGGAGCATGTCGGCAAGGCATAGCAATGCCTTCAATTCTTCGGAATATCT
TAATACCCCTGTTCCTAAGCCGACTGGCGACAAAAGACGGAAGATCTCCC
GCACGGTCTCCTCATTGGGCCGGCTGGAGACAGGCCGTGCGACCCTTGGT
GATAAACTGTCTAACTCGAAGACGATATCGACAAAAGACGATGACCTGGA
GTTACAGTGGGGTGACTCTGATAAGGAGAACTGGATACCAGGCACACGAG
TCTCCCATGTTCGCCGGCGGACCACTTCGCATCATCACTCGCGGCGTTCA
ATACTTAGAGAGGCCAACAGCAGGGATGCCAAAGCCAACAGGGATCTGGC
ATCAGGCGGAAGATACTCACGGGTGTCCCACCCGCACCAACGAGTGAGCG
GGGTAATCGACAAGGATGTGCCTGAGATGGACGCCGAGGTGTCGGCTTTC
ATGAATGGCGGGGGAGGTGCAAGTCAGGAAGAAGACCTTGACTGCATTCA
AGGCTTGTTGTCTCTGAGCCAAGGGGCATGGAGATGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1723925..1725811+

>CAN33_52780-T1 ID=CAN33_52780-T1|Name=CAN33_52780-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5202bp|location=Sequence derived from alignment at NKJJ01000020.1:1723925..1725811+ (Aspergillus niger FDAARGOS_311)
ATGTCTGATCCGGAGCCCTCTTCTGCACCATGCTCCTCCTCGCCGCCCTC
AACCCAGGCGTCTGACTCTACTGCTGCCCTCAATTACGCCTTCCTAGTAC
ACTCCCAAAAGACCTTAACTCAGAACCTTCCTCCACGCGTCGACAATAAA
TTGCTGGCACGGCAAAAGCGGCGTCGGACTAGCCCCGAAGACCACGCAAT
CCTTGAAGCCGAGTATCAACGGAACCCGAAGCCAGACAAAACGGCCCGAG
CCAGTATAGTCAGTCGCGTCTCGTTGGGCGAGAAGGAAGTGCAAATCTGG
TTCCAAAATCGTCGTCAAAATGATCGCCGGAAATCGAAACCATTGCAACC
TCATGAGCTTCTCGCGCCTCGGTCGGACGTGTCCGACGCGTCAAAACGGG
TAGCCGATGACAACCTTCCGACGAAGCCAGGATCTTCGAGCGGGACAGAG
CAATCAGAGGGCAACTGCCAGGACAGGAACGTTGCTACACAATCACCCGA
CCATGCGTCTTTTGAATCGGACGTGGTGCATGGAGACAATAATGAGCTGG
AGCAGTCAGGGTTAAGCTCTCAAACCAGCCTGGCTACTGAAGCTGTGGAG
GATTCGCAGAGAGCTTCAGACGAGACGATGCCGGAACAACAACCGCCCCC
GGTGCACGATGAAACTCATCTCGATGATTCCAACCCAGCTTCTGTTAAGA
GGAAACGATCATTTTCTGAGACCCGTGGCAATCGGCCGTTTATGCAGGGA
ACATCAACACCTATGAAGTCTCCTCCATCCTTGCGGATATCGCTCTCGTT
TGACGGAGAAGCTATGGTACGCAAAGAAGACGAGCTCACGCCATCTCCTC
CGAAAGGACGAAATGCCCTGCGGATCGCCATGTCCTCTGATGGAAAAGCC
GTGATCCGTGCTGATGGCGAGCCGTCTCCGTCAAAGAACCGCATTTCTAT
GTTCTCAGCGCGTAAGCCCAGGCTTGCAGGGCTTCGAAGGAGCAACAGTG
CCGCGGCATTTAGTACGCCACGTGGTGGTTCCATGGAGACTGAAAAGTTG
TTTGGAAGATCAAGAGATCCTCGCAACTGGGAATCGTTCTTTGACACCGA
TGCAAGAAGTGCACTTTCTACTCCGACCAGCTCCCAAAGCGCACCGAACG
CTGGCTCTCCCGCTTTGTTCCGCGCACGTGGTCAGCGTTCACTAACGAGG
AGCATGTCGGCAAGGCATAGCAATGCCTTCAATTCTTCGGAATATCTTAA
TACCCCTGTTCCTAAGCCGACTGGCGACAAAAGACGGAAGATCTCCCGCA
CGGTCTCCTCATTGGGCCGGCTGGAGACAGGCCGTGCGACCCTTGGTGAT
AAACTGTCTAACTCGAAGACGATATCGACAAAAGACGATGACCTGGAGTT
ACAGTGGGGTGACTCTGATAAGGAGAACTGGATACCAGGCACACGAGTCT
CCCATGTTCGCCGGCGGACCACTTCGCATCATCACTCGCGGCGTTCAATA
CTTAGAGAGGCCAACAGCAGGGATGCCAAAGCCAACAGGGATCTGGCATC
AGGCGGAAGATACTCACGGGTGTCCCACCCGCACCAACGAGTGAGCGGGG
TAATCGACAAGGATGTGCCTGAGATGGACGCCGAGGTGTCGGCTTTCATG
AATGGCGGGGGAGGTGCAAGTCAGGAAGAAGACCTTGACTGCATTCAAGG
CTTGTTGTCTCTGAGCCAAGGGGCATGGAGATGAATGTCTGATCCGGAGC
CCTCTTCTGCACCATGCTCCTCCTCGCCGCCCTCAACCCAGGCGTCTGAC
TCTACTGCTGCCCTCAATTACGCCTTCCTAGTACACTCCCAAAAGACCTT
AACTCAGAACCTTCCTCCACGCGTCGACAATAAATTGCTGGCACGGCAAA
AGCGGCGTCGGACTAGCCCCGAAGACCACGCAATCCTTGAAGCCGAGTAT
CAACGGAACCCGAAGCCAGACAAAACGGCCCGAGCCAGTATAGTCAGTCG
CGTCTCGTTGGGCGAGAAGGAAGTGCAAATCTGGTTCCAAAATCGTCGTC
AAAATGATCGCCGGAAATCGAAACCATTGCAACCTCATGAGCTTCTCGCG
CCTCGGTCGGACGTGTCCGACGCGTCAAAACGGGTAGCCGATGACAACCT
TCCGACGAAGCCAGGATCTTCGAGCGGGACAGAGCAATCAGAGGGCAACT
GCCAGGACAGGAACGTTGCTACACAATCACCCGACCATGCGTCTTTTGAA
TCGGACGTGGTGCATGGAGACAATAATGAGCTGGAGCAGTCAGGGTTAAG
CTCTCAAACCAGCCTGGCTACTGAAGCTGTGGAGGATTCGCAGAGAGCTT
CAGACGAGACGATGCCGGAACAACAACCGCCCCCGGTGCACGATGAAACT
CATCTCGATGATTCCAACCCAGCTTCTGTTAAGAGGAAACGATCATTTTC
TGAGACCCGTGGCAATCGGCCGTTTATGCAGGGAACATCAACACCTATGA
AGTCTCCTCCATCCTTGCGGATATCGCTCTCGTTTGACGGAGAAGCTATG
GTACGCAAAGAAGACGAGCTCACGCCATCTCCTCCGAAAGGACGAAATGC
CCTGCGGATCGCCATGTCCTCTGATGGAAAAGCCGTGATCCGTGCTGATG
GCGAGCCGTCTCCGTCAAAGAACCGCATTTCTATGTTCTCAGCGCGTAAG
CCCAGGCTTGCAGGGCTTCGAAGGAGCAACAGTGCCGCGGCATTTAGTAC
GCCACGTGGTGGTTCCATGGAGACTGAAAAGTTGTTTGGAAGATCAAGAG
ATCCTCGCAACTGGGAATCGTTCTTTGACACCGATGCAAGAAGTGCACTT
TCTACTCCGACCAGCTCCCAAAGCGCACCGAACGCTGGCTCTCCCGCTTT
GTTCCGCGCACGTGGTCAGCGTTCACTAACGAGGAGCATGTCGGCAAGGC
ATAGCAATGCCTTCAATTCTTCGGAATATCTTAATACCCCTGTTCCTAAG
CCGACTGGCGACAAAAGACGGAAGATCTCCCGCACGGTCTCCTCATTGGG
CCGGCTGGAGACAGGCCGTGCGACCCTTGGTGATAAACTGTCTAACTCGA
AGACGATATCGACAAAAGACGATGACCTGGAGTTACAGTGGGGTGACTCT
GATAAGGAGAACTGGATACCAGGCACACGAGTCTCCCATGTTCGCCGGCG
GACCACTTCGCATCATCACTCGCGGCGTTCAATACTTAGAGAGGCCAACA
GCAGGGATGCCAAAGCCAACAGGGATCTGGCATCAGGCGGAAGATACTCA
CGGGTGTCCCACCCGCACCAACGAGTGAGCGGGGTAATCGACAAGGATGT
GCCTGAGATGGACGCCGAGGTGTCGGCTTTCATGAATGGCGGGGGAGGTG
CAAGTCAGGAAGAAGACCTTGACTGCATTCAAGGCTTGTTGTCTCTGAGC
CAAGGGGCATGGAGATGAATGTCTGATCCGGAGCCCTCTTCTGCACCATG
CTCCTCCTCGCCGCCCTCAACCCAGGCGTCTGACTCTACTGCTGCCCTCA
ATTACGCCTTCCTAGTACACTCCCAAAAGACCTTAACTCAGAACCTTCCT
CCACGCGTCGACAATAAATTGCTGGCACGGCAAAAGCGGCGTCGGACTAG
CCCCGAAGACCACGCAATCCTTGAAGCCGAGTATCAACGGAACCCGAAGC
CAGACAAAACGGCCCGAGCCAGTATAGTCAGTCGCGTCTCGTTGGGCGAG
AAGGAAGTGCAAATCTGGTTCCAAAATCGTCGTCAAAATGATCGCCGGAA
ATCGAAACCATTGCAACCTCATGAGCTTCTCGCGCCTCGGTCGGACGTGT
CCGACGCGTCAAAACGGGTAGCCGATGACAACCTTCCGACGAAGCCAGGA
TCTTCGAGCGGGACAGAGCAATCAGAGGGCAACTGCCAGGACAGGAACGT
TGCTACACAATCACCCGACCATGCGTCTTTTGAATCGGACGTGGTGCATG
GAGACAATAATGAGCTGGAGCAGTCAGGGTTAAGCTCTCAAACCAGCCTG
GCTACTGAAGCTGTGGAGGATTCGCAGAGAGCTTCAGACGAGACGATGCC
GGAACAACAACCGCCCCCGGTGCACGATGAAACTCATCTCGATGATTCCA
ACCCAGCTTCTGTTAAGAGGAAACGATCATTTTCTGAGACCCGTGGCAAT
CGGCCGTTTATGCAGGGAACATCAACACCTATGAAGTCTCCTCCATCCTT
GCGGATATCGCTCTCGTTTGACGGAGAAGCTATGGTACGCAAAGAAGACG
AGCTCACGCCATCTCCTCCGAAAGGACGAAATGCCCTGCGGATCGCCATG
TCCTCTGATGGAAAAGCCGTGATCCGTGCTGATGGCGAGCCGTCTCCGTC
AAAGAACCGCATTTCTATGTTCTCAGCGCGTAAGCCCAGGCTTGCAGGGC
TTCGAAGGAGCAACAGTGCCGCGGCATTTAGTACGCCACGTGGTGGTTCC
ATGGAGACTGAAAAGTTGTTTGGAAGATCAAGAGATCCTCGCAACTGGGA
ATCGTTCTTTGACACCGATGCAAGAAGTGCACTTTCTACTCCGACCAGCT
CCCAAAGCGCACCGAACGCTGGCTCTCCCGCTTTGTTCCGCGCACGTGGT
CAGCGTTCACTAACGAGGAGCATGTCGGCAAGGCATAGCAATGCCTTCAA
TTCTTCGGAATATCTTAATACCCCTGTTCCTAAGCCGACTGGCGACAAAA
GACGGAAGATCTCCCGCACGGTCTCCTCATTGGGCCGGCTGGAGACAGGC
CGTGCGACCCTTGGTGATAAACTGTCTAACTCGAAGACGATATCGACAAA
AGACGATGACCTGGAGTTACAGTGGGGTGACTCTGATAAGGAGAACTGGA
TACCAGGCACACGAGTCTCCCATGTTCGCCGGCGGACCACTTCGCATCAT
CACTCGCGGCGTTCAATACTTAGAGAGGCCAACAGCAGGGATGCCAAAGC
CAACAGGGATCTGGCATCAGGCGGAAGATACTCACGGGTGTCCCACCCGC
ACCAACGAGTGAGCGGGGTAATCGACAAGGATGTGCCTGAGATGGACGCC
GAGGTGTCGGCTTTCATGAATGGCGGGGGAGGTGCAAGTCAGGAAGAAGA
CCTTGACTGCATTCAAGGCTTGTTGTCTCTGAGCCAAGGGGCATGGAGAT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52780CAN33_52780Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52780-T1.exon1CAN33_52780-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_52780-T1.exon2CAN33_52780-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52780-T1.exon3CAN33_52780-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52780-T1.cdsCAN33_52780-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52780-T1CAN33_52780-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017970
DBxrefInterPro:IPR001356
DBxrefPFAM:PF00046
ProductHomeobox domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1723925..1725811 +
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