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CAN33_5290-T1, CAN33_5290-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5290-T1
Unique NameCAN33_5290-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:917613..918818+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5290-T1 ID=CAN33_5290-T1|Name=CAN33_5290-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1206bp|location=Sequence derived from alignment at NKJJ01000019.1:917613..918818+ (Aspergillus niger FDAARGOS_311)
ATGTCCGGCTTCCAGTACCAAAAGTGGACGGTCTCTGAGGTATGGTATCT
CACATTCATTTTTGAGTGAAGGCGACCGGCCGAAGGAGACAAGAATGGGG
AAGCTAATGCTCGCACTGGTTTCTGTATGCAGCCGTATGTCGATGTACCG
GGAACCTTATTGGAAGGACCGTTTCACGACAAGACCAAGAATGAGTTTCG
CTTCGTCGATATCTGGGAGCAGAAACTATACGTTCTGGACCTGGCCAAAG
GGCCCGACTCCCTGAAGATCATGGACACATCTGTGTCAATCGGGTATGTC
GCTCCTAGCTAGACTCCTTGGCCCACAGAATAATTACACCGTAAGCGGTG
CCCAAAAAGACATTAATCTCATACTCCGAACAATATGTAGAGTAACCGCC
AACATTGCGAATGCTGGAGATTCACGCGAGAACCAGATCGTCGTAGCCGC
AAAACATGGATTCGCCCTGGTCGACCGCACCACGGGCGCACTGTCCTATA
TTCAGAAAGTGTGGGACGATCCGGCCAAGGAGCATAGGTAAGTCAATTAT
CTAGTTTCTTTGCCATCATCCTCGTGGGTCTGACTCATCGGGAACGTCAT
CAAAACAGAATGCGTTTCAACGATGGGGCCGTCGACAGCCACGGACGGTT
CTGGGCTGGAGCCATGAACGATTCCAAGGTGCAGAACCCAGTCAACGAAG
GTGTGATATTCAGGTTAGACCCGGACATGAAACTGCACCGCATGGTTGAA
CAGGTGACGATTCCCAACGGGATTGGCTGGAATCCTGCGGATGACACTAT
GTACCTGACCGACTCTCCCACCGGCAAGATTTACGCCTTTGATTTCGATG
CTGAGACCGGAAACATCAGCAACCGAAGGGTGTTCTTTGACATTGGGGAG
CCAAAAGAGCCGGATGGGTTTGCCATCGATGAGGAGGGGTGTATATGGAG
TGCAATTTACGGTGGTGGGAAGGTGATTCGTATCTCGCCGGAGGGCAAGA
TCATTGGCGAGATAACTTTTCCCACCCGAAACATTACCTGTCCAGCTTTT
GTGGGAACGGAACTCTTCATCACGACCGCCAAGGATGATACCAATGATGA
CCAGTTTCCGGAATCCGTCCGGTATGGAGGCCGGCTCTATAGAGTCGACG
TCGGCATCAAGGGTAAGCCTAAGAATGAGTTTCGACTCGAAGGCAGCCCG
TTATAG
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Coding sequence (CDS) from alignment at NKJJ01000019.1:917613..918818+

>CAN33_5290-T1 ID=CAN33_5290-T1|Name=CAN33_5290-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3780bp|location=Sequence derived from alignment at NKJJ01000019.1:917613..918818+ (Aspergillus niger FDAARGOS_311)
ATGTCCGGCTTCCAGTACCAAAAGTGGACGGTCTCTGAGCCGTATGTCGA
TGTACCGGGAACCTTATTGGAAGGACCGTTTCACGACAAGACCAAGAATG
AGTTTCGCTTCGTCGATATCTGGGAGCAGAAACTATACGTTCTGGACCTG
GCCAAAGGGCCCGACTCCCTGAAGATCATGGACACATCTGTGTCAATCGG
AGTAACCGCCAACATTGCGAATGCTGGAGATTCACGCGAGAACCAGATCG
TCGTAGCCGCAAAACATGGATTCGCCCTGGTCGACCGCACCACGGGCGCA
CTGTCCTATATTCAGAAAGTGTGGGACGATCCGGCCAAGGAGCATAGAAT
GCGTTTCAACGATGGGGCCGTCGACAGCCACGGACGGTTCTGGGCTGGAG
CCATGAACGATTCCAAGGTGCAGAACCCAGTCAACGAAGGTGTGATATTC
AGGTTAGACCCGGACATGAAACTGCACCGCATGGTTGAACAGGTGACGAT
TCCCAACGGGATTGGCTGGAATCCTGCGGATGACACTATGTACCTGACCG
ACTCTCCCACCGGCAAGATTTACGCCTTTGATTTCGATGCTGAGACCGGA
AACATCAGCAACCGAAGGGTGTTCTTTGACATTGGGGAGCCAAAAGAGCC
GGATGGGTTTGCCATCGATGAGGAGGGGTGTATATGGAGTGCAATTTACG
GTGGTGGGAAGGTGATTCGTATCTCGCCGGAGGGCAAGATCATTGGCGAG
ATAACTTTTCCCACCCGAAACATTACCTGTCCAGCTTTTGTGGGAACGGA
ACTCTTCATCACGACCGCCAAGGATGATACCAATGATGACCAGTTTCCGG
AATCCGTCCGGTATGGAGGCCGGCTCTATAGAGTCGACGTCGGCATCAAG
GGTAAGCCTAAGAATGAGTTTCGACTCGAAGGCAGCCCGTTATAGATGTC
CGGCTTCCAGTACCAAAAGTGGACGGTCTCTGAGCCGTATGTCGATGTAC
CGGGAACCTTATTGGAAGGACCGTTTCACGACAAGACCAAGAATGAGTTT
CGCTTCGTCGATATCTGGGAGCAGAAACTATACGTTCTGGACCTGGCCAA
AGGGCCCGACTCCCTGAAGATCATGGACACATCTGTGTCAATCGGAGTAA
CCGCCAACATTGCGAATGCTGGAGATTCACGCGAGAACCAGATCGTCGTA
GCCGCAAAACATGGATTCGCCCTGGTCGACCGCACCACGGGCGCACTGTC
CTATATTCAGAAAGTGTGGGACGATCCGGCCAAGGAGCATAGAATGCGTT
TCAACGATGGGGCCGTCGACAGCCACGGACGGTTCTGGGCTGGAGCCATG
AACGATTCCAAGGTGCAGAACCCAGTCAACGAAGGTGTGATATTCAGGTT
AGACCCGGACATGAAACTGCACCGCATGGTTGAACAGGTGACGATTCCCA
ACGGGATTGGCTGGAATCCTGCGGATGACACTATGTACCTGACCGACTCT
CCCACCGGCAAGATTTACGCCTTTGATTTCGATGCTGAGACCGGAAACAT
CAGCAACCGAAGGGTGTTCTTTGACATTGGGGAGCCAAAAGAGCCGGATG
GGTTTGCCATCGATGAGGAGGGGTGTATATGGAGTGCAATTTACGGTGGT
GGGAAGGTGATTCGTATCTCGCCGGAGGGCAAGATCATTGGCGAGATAAC
TTTTCCCACCCGAAACATTACCTGTCCAGCTTTTGTGGGAACGGAACTCT
TCATCACGACCGCCAAGGATGATACCAATGATGACCAGTTTCCGGAATCC
GTCCGGTATGGAGGCCGGCTCTATAGAGTCGACGTCGGCATCAAGGGTAA
GCCTAAGAATGAGTTTCGACTCGAAGGCAGCCCGTTATAGATGTCCGGCT
TCCAGTACCAAAAGTGGACGGTCTCTGAGCCGTATGTCGATGTACCGGGA
ACCTTATTGGAAGGACCGTTTCACGACAAGACCAAGAATGAGTTTCGCTT
CGTCGATATCTGGGAGCAGAAACTATACGTTCTGGACCTGGCCAAAGGGC
CCGACTCCCTGAAGATCATGGACACATCTGTGTCAATCGGAGTAACCGCC
AACATTGCGAATGCTGGAGATTCACGCGAGAACCAGATCGTCGTAGCCGC
AAAACATGGATTCGCCCTGGTCGACCGCACCACGGGCGCACTGTCCTATA
TTCAGAAAGTGTGGGACGATCCGGCCAAGGAGCATAGAATGCGTTTCAAC
GATGGGGCCGTCGACAGCCACGGACGGTTCTGGGCTGGAGCCATGAACGA
TTCCAAGGTGCAGAACCCAGTCAACGAAGGTGTGATATTCAGGTTAGACC
CGGACATGAAACTGCACCGCATGGTTGAACAGGTGACGATTCCCAACGGG
ATTGGCTGGAATCCTGCGGATGACACTATGTACCTGACCGACTCTCCCAC
CGGCAAGATTTACGCCTTTGATTTCGATGCTGAGACCGGAAACATCAGCA
ACCGAAGGGTGTTCTTTGACATTGGGGAGCCAAAAGAGCCGGATGGGTTT
GCCATCGATGAGGAGGGGTGTATATGGAGTGCAATTTACGGTGGTGGGAA
GGTGATTCGTATCTCGCCGGAGGGCAAGATCATTGGCGAGATAACTTTTC
CCACCCGAAACATTACCTGTCCAGCTTTTGTGGGAACGGAACTCTTCATC
ACGACCGCCAAGGATGATACCAATGATGACCAGTTTCCGGAATCCGTCCG
GTATGGAGGCCGGCTCTATAGAGTCGACGTCGGCATCAAGGGTAAGCCTA
AGAATGAGTTTCGACTCGAAGGCAGCCCGTTATAGATGTCCGGCTTCCAG
TACCAAAAGTGGACGGTCTCTGAGCCGTATGTCGATGTACCGGGAACCTT
ATTGGAAGGACCGTTTCACGACAAGACCAAGAATGAGTTTCGCTTCGTCG
ATATCTGGGAGCAGAAACTATACGTTCTGGACCTGGCCAAAGGGCCCGAC
TCCCTGAAGATCATGGACACATCTGTGTCAATCGGAGTAACCGCCAACAT
TGCGAATGCTGGAGATTCACGCGAGAACCAGATCGTCGTAGCCGCAAAAC
ATGGATTCGCCCTGGTCGACCGCACCACGGGCGCACTGTCCTATATTCAG
AAAGTGTGGGACGATCCGGCCAAGGAGCATAGAATGCGTTTCAACGATGG
GGCCGTCGACAGCCACGGACGGTTCTGGGCTGGAGCCATGAACGATTCCA
AGGTGCAGAACCCAGTCAACGAAGGTGTGATATTCAGGTTAGACCCGGAC
ATGAAACTGCACCGCATGGTTGAACAGGTGACGATTCCCAACGGGATTGG
CTGGAATCCTGCGGATGACACTATGTACCTGACCGACTCTCCCACCGGCA
AGATTTACGCCTTTGATTTCGATGCTGAGACCGGAAACATCAGCAACCGA
AGGGTGTTCTTTGACATTGGGGAGCCAAAAGAGCCGGATGGGTTTGCCAT
CGATGAGGAGGGGTGTATATGGAGTGCAATTTACGGTGGTGGGAAGGTGA
TTCGTATCTCGCCGGAGGGCAAGATCATTGGCGAGATAACTTTTCCCACC
CGAAACATTACCTGTCCAGCTTTTGTGGGAACGGAACTCTTCATCACGAC
CGCCAAGGATGATACCAATGATGACCAGTTTCCGGAATCCGTCCGGTATG
GAGGCCGGCTCTATAGAGTCGACGTCGGCATCAAGGGTAAGCCTAAGAAT
GAGTTTCGACTCGAAGGCAGCCCGTTATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_5290CAN33_5290Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5290-T1.exon1CAN33_5290-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_5290-T1.exon2CAN33_5290-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_5290-T1.exon3CAN33_5290-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_5290-T1.exon4CAN33_5290-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5290-T1.cdsCAN33_5290-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5290-T1CAN33_5290-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013658
DBxrefInterPro:IPR011042
DBxrefInterPro:IPR005511
DBxrefPFAM:PF08450
ProductSMP-30/Gluconolaconase/LRE-like region family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:917613..918818 +
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