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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1813199..1814164- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_52920-T1 ID=CAN33_52920-T1|Name=CAN33_52920-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=966bp|location=Sequence derived from alignment at NKJJ01000020.1:1813199..1814164- (Aspergillus niger FDAARGOS_311)
ATGACTTTCTTCGACCCTTCAACCGAAGACCTTGACGTCCCTACCATTCG
CAAGCACGCCGTTCGCCTCGCAAAAGCCGGTCTCGTCGGTCTCGTCTGCA
TGGGCTCCAACGGCGAAGCCGTACACCTCACCCGGGCAGAGCGCAAGACC
GTGATCAACGAGACCCGCTCCGCACTCGTTGAAGCCGGCTTCTCCAACGT
CCCCGTCATCGCAGGAGCCAGCGAACAATCCATTCGCGGCACCATCGAGC
TCTGCAAGGAATCCTACGAAGCCGGAGCTGAATATGCCCTGATCGTTCCC
CCCAGCTACTACCGCTACGCCACCGGCAACGACCAAACCCTCTATGAATT
CTTCACCAGCGTCGCCGATGGTTCCCCCATCCCTCTCATCCTCTACAACT
ACCCCGGTGCCGTGGCAGGAATTGACATGGACTCCGACCTCATCATCCGC
ATCTCTCAGCACCCCAACATCGTAGGCACGAAGTTCACTTGCGCCAACAC
CGGCAAGTTGACCCGTGTTGCTTCCGCCCTGCACGCCATTACCCCTCCTT
CGCCATTGGCTCCGGCGCAGCGCAAGTTCCCCAGCACAAAGACGGAGGCA
AACCACCCATACGTTGCGTTCGGAGGTATTGCAGATTTCTCCCTGCAGAC
GCTGGCGTCCGGAGGTTCCGCGATCCTGGCGGGTGGCGCGAATGTCATCC
CCAAGCTGTGTGTGCAGATCTTCAACCTCTGGAGCGCGGGTCGCTTCACG
GAGGCTATGGAGGCTCAGGAGTTGTTGAGTAGGGCTGACTGGGTCCTCAC
TAAGGCGGCTATCCCCGGTACGAAGAGTGCAATTCAGAGCTACTATGGAT
ATGGTGGATTCCCGCGTCGCCCGTTGGCTCGCTTGAGTGCCGAGCAGGCG
GAGGCGGTGGCTGAGAAGATCAAGGATGCCATGGAGGTTGAGAAGTCGTT
GCCGGATATTGCTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1813199..1814164- >CAN33_52920-T1 ID=CAN33_52920-T1|Name=CAN33_52920-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=966bp|location=Sequence derived from alignment at NKJJ01000020.1:1813199..1814164- (Aspergillus niger FDAARGOS_311)
ATGACTTTCTTCGACCCTTCAACCGAAGACCTTGACGTCCCTACCATTCG
CAAGCACGCCGTTCGCCTCGCAAAAGCCGGTCTCGTCGGTCTCGTCTGCA
TGGGCTCCAACGGCGAAGCCGTACACCTCACCCGGGCAGAGCGCAAGACC
GTGATCAACGAGACCCGCTCCGCACTCGTTGAAGCCGGCTTCTCCAACGT
CCCCGTCATCGCAGGAGCCAGCGAACAATCCATTCGCGGCACCATCGAGC
TCTGCAAGGAATCCTACGAAGCCGGAGCTGAATATGCCCTGATCGTTCCC
CCCAGCTACTACCGCTACGCCACCGGCAACGACCAAACCCTCTATGAATT
CTTCACCAGCGTCGCCGATGGTTCCCCCATCCCTCTCATCCTCTACAACT
ACCCCGGTGCCGTGGCAGGAATTGACATGGACTCCGACCTCATCATCCGC
ATCTCTCAGCACCCCAACATCGTAGGCACGAAGTTCACTTGCGCCAACAC
CGGCAAGTTGACCCGTGTTGCTTCCGCCCTGCACGCCATTACCCCTCCTT
CGCCATTGGCTCCGGCGCAGCGCAAGTTCCCCAGCACAAAGACGGAGGCA
AACCACCCATACGTTGCGTTCGGAGGTATTGCAGATTTCTCCCTGCAGAC
GCTGGCGTCCGGAGGTTCCGCGATCCTGGCGGGTGGCGCGAATGTCATCC
CCAAGCTGTGTGTGCAGATCTTCAACCTCTGGAGCGCGGGTCGCTTCACG
GAGGCTATGGAGGCTCAGGAGTTGTTGAGTAGGGCTGACTGGGTCCTCAC
TAAGGCGGCTATCCCCGGTACGAAGAGTGCAATTCAGAGCTACTATGGAT
ATGGTGGATTCCCGCGTCGCCCGTTGGCTCGCTTGAGTGCCGAGCAGGCG
GAGGCGGTGGCTGAGAAGATCAAGGATGCCATGGAGGTTGAGAAGTCGTT
GCCGGATATTGCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0016829 | lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR002220 |
| DBxref | PFAM:PF00701 |
| Product | Dihydrodipicolinate synthetase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1813199..1814164 - |
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