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CAN33_52930-T1, CAN33_52930-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52930-T1
Unique NameCAN33_52930-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1817950..1819981+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52930-T1 ID=CAN33_52930-T1|Name=CAN33_52930-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2032bp|location=Sequence derived from alignment at NKJJ01000020.1:1817950..1819981+ (Aspergillus niger FDAARGOS_311)
ATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTT
CTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACAA
CCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA
GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCC
TGTCCCTAGGCGCCGTGAAGCAAAGAGCTTCTCTAGCTTACGCCATCCCG
TGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC
AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTC
CTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATCT
CCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT
GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGC
TCGCGCTGCAGCTGCAGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACA
GTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT
GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTAT
AGTACGGATTGATCCTGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAG
TGTTCTCCTACCTCGATCCCGAGTCGCTTATGCAGTCTGAGCTGGTTTCT
CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTT
CCGCCATACTTACGGACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGAC
AATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG
TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCCGC
TGCTATCTACCTTCATGGCCATAAGGACAGTGTCTACTGTGCGCAATTTG
ATGAGTAAGTTACTCGTTGGTAAACATCTGCATATAAGCTCTTTTTAATT
ATACCCCAGGGACAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTG
TATGGGACGCTCATTACCCTTGGCCATGCCGGAAGATCATTGGCCCTCCC
CCGGGCGATGTCTCCGGTATTGGTCCGGTCAATAACCCGGCGCAGCAATC
AGCCGGAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGTTCTG
CGGGGATCATGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCC
ATTCTCTGCCTCCAGTTTGACGAAGAAATCATGGTCACCGGTTCGTCTGA
TTTTACCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTC
GCCTTGTGGGCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGG
TACATTGTGTCCTGCTCCAAAGACACTACAATTTGTGTGTGGGATCGGCA
CACAGGGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACG
CTGTTCAGCTGCGCGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGCGTC
GCCAAGCTCTGGAACATCACTTCTGGCCTTTGTGTCAAGGAGTTTCCCAG
CAAGGACCGTGGACTGGCATGTGTTGAATTCAGCGATGATGCTCGAACCA
TTCTCACTGGCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACC
GGCGACATGGTCAATGAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTT
GCACCTCGACAGTATGAACCAAAGAATCGTCAGTGGTAGCTATGACATGA
GTGTTAAAGTATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCG
GGCTGGACAACGAGCTGGATGCTCAGCGTCAAGTCCGATTATCGGCGCAT
TGTGGCTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACG
GACTAGATGGCATAGACTTGCTGAAAGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1817950..1819981+

>CAN33_52930-T1 ID=CAN33_52930-T1|Name=CAN33_52930-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5553bp|location=Sequence derived from alignment at NKJJ01000020.1:1817950..1819981+ (Aspergillus niger FDAARGOS_311)
ATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTT
CTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACAA
CCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA
GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCC
TGTCCCTAGGCGCCGTGAAGCAAAGAGCTTCTCTAGCTTACGCCATCCCG
TGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC
AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTC
CTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATCT
CCGCGCTGCACGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGATTG
ACTCAAGACTCGGAAAGTGGCATTGGAATCGATCTACGCGATCGCTCAGA
GCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCTGCC
TTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAGTCG
CTTATGCAGTCTGAGCTGGTTTCTCGTGCTTGGAGTGAGCAGGCATCCTC
CCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACCCTA
GCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACTCAT
CCCAAGCAGGATTGGAAGCGGATGTTCCTGGTTCGCCGTGCTTTGGAACA
TCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCATGGCCATAAGG
ACAGTGTCTACTGTGCGCAATTTGATGAGGACAAAATCATCACTGGCTCT
CGCGATCGAACCATTCGTGTATGGGACGCTCATTACCCTTGGCCATGCCG
GAAGATCATTGGCCCTCCCCCGGGCGATGTCTCCGGTATTGGTCCGGTCA
ATAACCCGGCGCAGCAATCAGCCGGAAAGCCGCCCTTCTTGACCATCTGC
CCCCCGCCGACGCGTTCTGCGGGGATCATGGCTCCCATTGAGCACAGCGC
AGACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAATCA
TGGTCACCGGTTCGTCTGATTTTACCTGCATTGTGTGGGATATCAAGAAC
GACTACAAGCCGATTCGTCGCCTTGTGGGCCATCAGGCAGGAGTGCTGGA
TGTCTGCTTTGATGACCGGTACATTGTGTCCTGCTCCAAAGACACTACAA
TTTGTGTGTGGGATCGGCACACAGGGGCCTTGGTGAAGAAACTCCTTGGC
CACAGAGGTCCAGTGAACGCTGTTCAGCTGCGCGGAGATCTTGTCGTTTC
TGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAACATCACTTCTGGCCTTT
GTGTCAAGGAGTTTCCCAGCAAGGACCGTGGACTGGCATGTGTTGAATTC
AGCGATGATGCTCGAACCATTCTCACTGGCGGCAACGATCAAGTGATCTA
TCAGTTTGACGCCAATACCGGCGACATGGTCAATGAGCTCAAGGGCCACG
CGGGCTTGGTTCGCTCCTTGCACCTCGACAGTATGAACCAAAGAATCGTC
AGTGGTAGCTATGACATGAGTGTTAAAGTATTCGATGCTCAAAGTGGCGA
GCTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCGTCA
AGTCCGATTATCGGCGCATTGTGGCTACCAGCCAAGACTCTCGCGCTGTC
ATAATGGATTTTGGATACGGACTAGATGGCATAGACTTGCTGAAAGAGTA
AATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCTT
TCTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACA
ACCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGG
AGATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGC
CTGTCCCTAGGCGCCGTGAAGCAAAGAGCTTCTCTAGCTTACGCCATCCC
GTGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAA
CAAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATT
CCTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATC
TCCGCGCTGCACGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGATT
GACTCAAGACTCGGAAAGTGGCATTGGAATCGATCTACGCGATCGCTCAG
AGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCTGC
CTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAGTC
GCTTATGCAGTCTGAGCTGGTTTCTCGTGCTTGGAGTGAGCAGGCATCCT
CCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACCCT
AGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACTCA
TCCCAAGCAGGATTGGAAGCGGATGTTCCTGGTTCGCCGTGCTTTGGAAC
ATCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCATGGCCATAAG
GACAGTGTCTACTGTGCGCAATTTGATGAGGACAAAATCATCACTGGCTC
TCGCGATCGAACCATTCGTGTATGGGACGCTCATTACCCTTGGCCATGCC
GGAAGATCATTGGCCCTCCCCCGGGCGATGTCTCCGGTATTGGTCCGGTC
AATAACCCGGCGCAGCAATCAGCCGGAAAGCCGCCCTTCTTGACCATCTG
CCCCCCGCCGACGCGTTCTGCGGGGATCATGGCTCCCATTGAGCACAGCG
CAGACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAATC
ATGGTCACCGGTTCGTCTGATTTTACCTGCATTGTGTGGGATATCAAGAA
CGACTACAAGCCGATTCGTCGCCTTGTGGGCCATCAGGCAGGAGTGCTGG
ATGTCTGCTTTGATGACCGGTACATTGTGTCCTGCTCCAAAGACACTACA
ATTTGTGTGTGGGATCGGCACACAGGGGCCTTGGTGAAGAAACTCCTTGG
CCACAGAGGTCCAGTGAACGCTGTTCAGCTGCGCGGAGATCTTGTCGTTT
CTGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAACATCACTTCTGGCCTT
TGTGTCAAGGAGTTTCCCAGCAAGGACCGTGGACTGGCATGTGTTGAATT
CAGCGATGATGCTCGAACCATTCTCACTGGCGGCAACGATCAAGTGATCT
ATCAGTTTGACGCCAATACCGGCGACATGGTCAATGAGCTCAAGGGCCAC
GCGGGCTTGGTTCGCTCCTTGCACCTCGACAGTATGAACCAAAGAATCGT
CAGTGGTAGCTATGACATGAGTGTTAAAGTATTCGATGCTCAAAGTGGCG
AGCTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCGTC
AAGTCCGATTATCGGCGCATTGTGGCTACCAGCCAAGACTCTCGCGCTGT
CATAATGGATTTTGGATACGGACTAGATGGCATAGACTTGCTGAAAGAGT
AAATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCT
TTCTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATAC
AACCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGG
GAGATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAG
CCTGTCCCTAGGCGCCGTGAAGCAAAGAGCTTCTCTAGCTTACGCCATCC
CGTGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCA
ACAAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAAT
TCCTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCAT
CTCCGCGCTGCACGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGAT
TGACTCAAGACTCGGAAAGTGGCATTGGAATCGATCTACGCGATCGCTCA
GAGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCTG
CCTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAGT
CGCTTATGCAGTCTGAGCTGGTTTCTCGTGCTTGGAGTGAGCAGGCATCC
TCCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACCC
TAGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACTC
ATCCCAAGCAGGATTGGAAGCGGATGTTCCTGGTTCGCCGTGCTTTGGAA
CATCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCATGGCCATAA
GGACAGTGTCTACTGTGCGCAATTTGATGAGGACAAAATCATCACTGGCT
CTCGCGATCGAACCATTCGTGTATGGGACGCTCATTACCCTTGGCCATGC
CGGAAGATCATTGGCCCTCCCCCGGGCGATGTCTCCGGTATTGGTCCGGT
CAATAACCCGGCGCAGCAATCAGCCGGAAAGCCGCCCTTCTTGACCATCT
GCCCCCCGCCGACGCGTTCTGCGGGGATCATGGCTCCCATTGAGCACAGC
GCAGACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAAT
CATGGTCACCGGTTCGTCTGATTTTACCTGCATTGTGTGGGATATCAAGA
ACGACTACAAGCCGATTCGTCGCCTTGTGGGCCATCAGGCAGGAGTGCTG
GATGTCTGCTTTGATGACCGGTACATTGTGTCCTGCTCCAAAGACACTAC
AATTTGTGTGTGGGATCGGCACACAGGGGCCTTGGTGAAGAAACTCCTTG
GCCACAGAGGTCCAGTGAACGCTGTTCAGCTGCGCGGAGATCTTGTCGTT
TCTGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAACATCACTTCTGGCCT
TTGTGTCAAGGAGTTTCCCAGCAAGGACCGTGGACTGGCATGTGTTGAAT
TCAGCGATGATGCTCGAACCATTCTCACTGGCGGCAACGATCAAGTGATC
TATCAGTTTGACGCCAATACCGGCGACATGGTCAATGAGCTCAAGGGCCA
CGCGGGCTTGGTTCGCTCCTTGCACCTCGACAGTATGAACCAAAGAATCG
TCAGTGGTAGCTATGACATGAGTGTTAAAGTATTCGATGCTCAAAGTGGC
GAGCTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCGT
CAAGTCCGATTATCGGCGCATTGTGGCTACCAGCCAAGACTCTCGCGCTG
TCATAATGGATTTTGGATACGGACTAGATGGCATAGACTTGCTGAAAGAG
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52930CAN33_52930Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52930-T1.exon1CAN33_52930-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_52930-T1.exon2CAN33_52930-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52930-T1.exon3CAN33_52930-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52930-T1.cdsCAN33_52930-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52930-T1CAN33_52930-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1817950..1819981 +
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