You are here

Home

CAN33_52935-T1, CAN33_52935-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52935-T1
Unique NameCAN33_52935-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1820525..1821677+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52935-T1 ID=CAN33_52935-T1|Name=CAN33_52935-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1153bp|location=Sequence derived from alignment at NKJJ01000020.1:1820525..1821677+ (Aspergillus niger FDAARGOS_311)
ATGTCGGAATCCAGGTTCGTCGGGCATCTGCCTCTGTTCTAGGACGGCTT
GTTATTCCTTTGCACCCATGGCTAACAATCCAGGATAACAGACAAGAGTT
GTTGGCATGGATCAACAACCTGCTGCAGTTGAACATGACCAAGGTTGAGC
AGTGCGGAACTGGGTAGGAACCTCCCTGACCGACGTGGAAAGTCGCTTGC
AACAGACGCCTTAGTAGCGCTTTCAACAAACAATTAGGCATGTCTTAGGC
CCATAGGCTGACGGAGTGATTGTACAGTGCCGCTCTGTGCCAGATCTTCG
ATTCGATATTCAGTGAGTTGGCGTGATGAGCTCACCCCTTTTTTCCACCC
CCGCCTGGACATGTGGCTTACTAGTTGCCTTCTAGTGGATGTCCCGATGT
CTCGCGTCAAGTTCAACGTCAACACCGAATACGCCTACCTTCAGAACTTC
AAGGTTCTTCAGAGTACGCCTCTTCCGAACGAATTGTGGTTTGGGAACGC
TGTTTCCGTTAACACAGGACTGTTTAGACGTCTTTGCCAAACACCAGGTG
GACAAGCCGATTCCGGTCGAATCTCTCACGAAATGCCGTATGCAGGACAA
CCTTGAGTTCCTTCAGTGGACGAAGAAGTACTGGGACCAACACTACCCGG
GTGGTGACTACGATGCGGTCGCTCGTCGCAAGGCCTCTGGTGGCCCCCGG
CCGCTGCGGGTGGCTCTCGCGCAGGTGCAAGCTCCGCCGGTGCGGCGCGC
CGTGGTACTACGCCTACTATTGGCGCCGCCCGCCCCCGTGTCGCTGGTGC
CGCAAGCGCTGCCAACGTATCTGCGCTGCAGCAGGAGATTGCTACGCAAA
AGGAGGCTATTGCTGGCTTGGAGAAGGAGAGGGACTTCTACTTTGCCAAG
CTGCGTGACATCGAATTGCTTTTGCAGAGCGCCATCGAGGCCGATCCGGA
GCTTGAGAAGGATGACGACTCGCTGGTGAAGCACATCCAGGGCATTCTGT
ACTCGACGGAGGTATGATTCCACACTAGCCGGACCTCTTTTGTTGCATGT
CAAGGAGGCTTCTCATTCCCGAATCCGTGGTTAACATGTGTTGCAGGAGG
GATTCGAGATTCCCGAAGCGGAGGCTGGGGCGGATGAACTTGAGACCTTC
TAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:1820525..1821677+

>CAN33_52935-T1 ID=CAN33_52935-T1|Name=CAN33_52935-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4935bp|location=Sequence derived from alignment at NKJJ01000020.1:1820525..1821677+ (Aspergillus niger FDAARGOS_311)
ATGTCGGAATCCAGACAAGAGTTGTTGGCATGGATCAACAACCTGCTGCA
GTTGAACATGACCAAGGTTGAGCAGTGCGGAACTGGTGCCGCTCTGTGCC
AGATCTTCGATTCGATATTCATGGATGTCCCGATGTCTCGCGTCAAGTTC
AACGTCAACACCGAATACGCCTACCTTCAGAACTTCAAGGTTCTTCAGAA
CGTCTTTGCCAAACACCAGGTGGACAAGCCGATTCCGGTCGAATCTCTCA
CGAAATGCCGTATGCAGGACAACCTTGAGTTCCTTCAGTGGACGAAGAAG
TACTGGGACCAACACTACCCGGGTGGTGACTACGATGCGGTCGCTCGTCG
CAAGGCCTCTGGTGCAAGCTCCGCCGGTGCGGCGCGCCGTGGTACTACGC
CTACTATTGGCGCCGCCCGCCCCCGTGTCGCTGGTGCCGCAAGCGCTGCC
AACGTATCTGCGCTGCAGCAGGAGATTGCTACGCAAAAGGAGGCTATTGC
TGGCTTGGAGAAGGAGAGGGACTTCTACTTTGCCAAGCTGCGTGACATCG
AATTGCTTTTGCAGAGCGCCATCGAGGCCGATCCGGAGCTTGAGAAGGAT
GACGACTCGCTGGTGAAGCACATCCAGGGCATTCTGTACTCGACGGAGGA
GGGATTCGAGATTCCCGAAGCGGAGGCTGGGGCGGATGAACTTGAGACCT
TCTAAATGTCGGAATCCAGACAAGAGTTGTTGGCATGGATCAACAACCTG
CTGCAGTTGAACATGACCAAGGTTGAGCAGTGCGGAACTGGTGCCGCTCT
GTGCCAGATCTTCGATTCGATATTCATGGATGTCCCGATGTCTCGCGTCA
AGTTCAACGTCAACACCGAATACGCCTACCTTCAGAACTTCAAGGTTCTT
CAGAACGTCTTTGCCAAACACCAGGTGGACAAGCCGATTCCGGTCGAATC
TCTCACGAAATGCCGTATGCAGGACAACCTTGAGTTCCTTCAGTGGACGA
AGAAGTACTGGGACCAACACTACCCGGGTGGTGACTACGATGCGGTCGCT
CGTCGCAAGGCCTCTGGTGCAAGCTCCGCCGGTGCGGCGCGCCGTGGTAC
TACGCCTACTATTGGCGCCGCCCGCCCCCGTGTCGCTGGTGCCGCAAGCG
CTGCCAACGTATCTGCGCTGCAGCAGGAGATTGCTACGCAAAAGGAGGCT
ATTGCTGGCTTGGAGAAGGAGAGGGACTTCTACTTTGCCAAGCTGCGTGA
CATCGAATTGCTTTTGCAGAGCGCCATCGAGGCCGATCCGGAGCTTGAGA
AGGATGACGACTCGCTGGTGAAGCACATCCAGGGCATTCTGTACTCGACG
GAGGAGGGATTCGAGATTCCCGAAGCGGAGGCTGGGGCGGATGAACTTGA
GACCTTCTAAATGTCGGAATCCAGACAAGAGTTGTTGGCATGGATCAACA
ACCTGCTGCAGTTGAACATGACCAAGGTTGAGCAGTGCGGAACTGGTGCC
GCTCTGTGCCAGATCTTCGATTCGATATTCATGGATGTCCCGATGTCTCG
CGTCAAGTTCAACGTCAACACCGAATACGCCTACCTTCAGAACTTCAAGG
TTCTTCAGAACGTCTTTGCCAAACACCAGGTGGACAAGCCGATTCCGGTC
GAATCTCTCACGAAATGCCGTATGCAGGACAACCTTGAGTTCCTTCAGTG
GACGAAGAAGTACTGGGACCAACACTACCCGGGTGGTGACTACGATGCGG
TCGCTCGTCGCAAGGCCTCTGGTGCAAGCTCCGCCGGTGCGGCGCGCCGT
GGTACTACGCCTACTATTGGCGCCGCCCGCCCCCGTGTCGCTGGTGCCGC
AAGCGCTGCCAACGTATCTGCGCTGCAGCAGGAGATTGCTACGCAAAAGG
AGGCTATTGCTGGCTTGGAGAAGGAGAGGGACTTCTACTTTGCCAAGCTG
CGTGACATCGAATTGCTTTTGCAGAGCGCCATCGAGGCCGATCCGGAGCT
TGAGAAGGATGACGACTCGCTGGTGAAGCACATCCAGGGCATTCTGTACT
CGACGGAGGAGGGATTCGAGATTCCCGAAGCGGAGGCTGGGGCGGATGAA
CTTGAGACCTTCTAAATGTCGGAATCCAGACAAGAGTTGTTGGCATGGAT
CAACAACCTGCTGCAGTTGAACATGACCAAGGTTGAGCAGTGCGGAACTG
GTGCCGCTCTGTGCCAGATCTTCGATTCGATATTCATGGATGTCCCGATG
TCTCGCGTCAAGTTCAACGTCAACACCGAATACGCCTACCTTCAGAACTT
CAAGGTTCTTCAGAACGTCTTTGCCAAACACCAGGTGGACAAGCCGATTC
CGGTCGAATCTCTCACGAAATGCCGTATGCAGGACAACCTTGAGTTCCTT
CAGTGGACGAAGAAGTACTGGGACCAACACTACCCGGGTGGTGACTACGA
TGCGGTCGCTCGTCGCAAGGCCTCTGGTGCAAGCTCCGCCGGTGCGGCGC
GCCGTGGTACTACGCCTACTATTGGCGCCGCCCGCCCCCGTGTCGCTGGT
GCCGCAAGCGCTGCCAACGTATCTGCGCTGCAGCAGGAGATTGCTACGCA
AAAGGAGGCTATTGCTGGCTTGGAGAAGGAGAGGGACTTCTACTTTGCCA
AGCTGCGTGACATCGAATTGCTTTTGCAGAGCGCCATCGAGGCCGATCCG
GAGCTTGAGAAGGATGACGACTCGCTGGTGAAGCACATCCAGGGCATTCT
GTACTCGACGGAGGAGGGATTCGAGATTCCCGAAGCGGAGGCTGGGGCGG
ATGAACTTGAGACCTTCTAAATGTCGGAATCCAGACAAGAGTTGTTGGCA
TGGATCAACAACCTGCTGCAGTTGAACATGACCAAGGTTGAGCAGTGCGG
AACTGGTGCCGCTCTGTGCCAGATCTTCGATTCGATATTCATGGATGTCC
CGATGTCTCGCGTCAAGTTCAACGTCAACACCGAATACGCCTACCTTCAG
AACTTCAAGGTTCTTCAGAACGTCTTTGCCAAACACCAGGTGGACAAGCC
GATTCCGGTCGAATCTCTCACGAAATGCCGTATGCAGGACAACCTTGAGT
TCCTTCAGTGGACGAAGAAGTACTGGGACCAACACTACCCGGGTGGTGAC
TACGATGCGGTCGCTCGTCGCAAGGCCTCTGGTGCAAGCTCCGCCGGTGC
GGCGCGCCGTGGTACTACGCCTACTATTGGCGCCGCCCGCCCCCGTGTCG
CTGGTGCCGCAAGCGCTGCCAACGTATCTGCGCTGCAGCAGGAGATTGCT
ACGCAAAAGGAGGCTATTGCTGGCTTGGAGAAGGAGAGGGACTTCTACTT
TGCCAAGCTGCGTGACATCGAATTGCTTTTGCAGAGCGCCATCGAGGCCG
ATCCGGAGCTTGAGAAGGATGACGACTCGCTGGTGAAGCACATCCAGGGC
ATTCTGTACTCGACGGAGGAGGGATTCGAGATTCCCGAAGCGGAGGCTGG
GGCGGATGAACTTGAGACCTTCTAAATGTCGGAATCCAGACAAGAGTTGT
TGGCATGGATCAACAACCTGCTGCAGTTGAACATGACCAAGGTTGAGCAG
TGCGGAACTGGTGCCGCTCTGTGCCAGATCTTCGATTCGATATTCATGGA
TGTCCCGATGTCTCGCGTCAAGTTCAACGTCAACACCGAATACGCCTACC
TTCAGAACTTCAAGGTTCTTCAGAACGTCTTTGCCAAACACCAGGTGGAC
AAGCCGATTCCGGTCGAATCTCTCACGAAATGCCGTATGCAGGACAACCT
TGAGTTCCTTCAGTGGACGAAGAAGTACTGGGACCAACACTACCCGGGTG
GTGACTACGATGCGGTCGCTCGTCGCAAGGCCTCTGGTGCAAGCTCCGCC
GGTGCGGCGCGCCGTGGTACTACGCCTACTATTGGCGCCGCCCGCCCCCG
TGTCGCTGGTGCCGCAAGCGCTGCCAACGTATCTGCGCTGCAGCAGGAGA
TTGCTACGCAAAAGGAGGCTATTGCTGGCTTGGAGAAGGAGAGGGACTTC
TACTTTGCCAAGCTGCGTGACATCGAATTGCTTTTGCAGAGCGCCATCGA
GGCCGATCCGGAGCTTGAGAAGGATGACGACTCGCTGGTGAAGCACATCC
AGGGCATTCTGTACTCGACGGAGGAGGGATTCGAGATTCCCGAAGCGGAG
GCTGGGGCGGATGAACTTGAGACCTTCTAAATGTCGGAATCCAGACAAGA
GTTGTTGGCATGGATCAACAACCTGCTGCAGTTGAACATGACCAAGGTTG
AGCAGTGCGGAACTGGTGCCGCTCTGTGCCAGATCTTCGATTCGATATTC
ATGGATGTCCCGATGTCTCGCGTCAAGTTCAACGTCAACACCGAATACGC
CTACCTTCAGAACTTCAAGGTTCTTCAGAACGTCTTTGCCAAACACCAGG
TGGACAAGCCGATTCCGGTCGAATCTCTCACGAAATGCCGTATGCAGGAC
AACCTTGAGTTCCTTCAGTGGACGAAGAAGTACTGGGACCAACACTACCC
GGGTGGTGACTACGATGCGGTCGCTCGTCGCAAGGCCTCTGGTGCAAGCT
CCGCCGGTGCGGCGCGCCGTGGTACTACGCCTACTATTGGCGCCGCCCGC
CCCCGTGTCGCTGGTGCCGCAAGCGCTGCCAACGTATCTGCGCTGCAGCA
GGAGATTGCTACGCAAAAGGAGGCTATTGCTGGCTTGGAGAAGGAGAGGG
ACTTCTACTTTGCCAAGCTGCGTGACATCGAATTGCTTTTGCAGAGCGCC
ATCGAGGCCGATCCGGAGCTTGAGAAGGATGACGACTCGCTGGTGAAGCA
CATCCAGGGCATTCTGTACTCGACGGAGGAGGGATTCGAGATTCCCGAAG
CGGAGGCTGGGGCGGATGAACTTGAGACCTTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008017microtubule binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52935CAN33_52935Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52935-T1CAN33_52935-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52935-T1.exon1CAN33_52935-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_52935-T1.exon2CAN33_52935-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_52935-T1.exon3CAN33_52935-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_52935-T1.exon4CAN33_52935-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_52935-T1.exon5CAN33_52935-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_52935-T1.exon6CAN33_52935-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_52935-T1.exon7CAN33_52935-T1.exon7Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52935-T1.cdsCAN33_52935-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteBUSCO:EOG09264KO7
DBxrefInterPro:IPR036133
DBxrefInterPro:IPR001715
DBxrefInterPro:IPR036872
DBxrefInterPro:IPR004953
DBxrefInterPro:IPR042180
DBxrefPFAM:PF03271
DBxrefPFAM:PF00307
ProductEB1-like C-terminal motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1820525..1821677 +
Powered by Drupal