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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:1878311..1880070+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_53025-T1 ID=CAN33_53025-T1|Name=CAN33_53025-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1760bp|location=Sequence derived from alignment at NKJJ01000020.1:1878311..1880070+ (Aspergillus niger FDAARGOS_311)
ATGCCTCCCAAACGCGCAGCATCTAGCGCCTCAAAGGCCAAAACCGAGAC
TGCCTCGAAGGCTACTGCCGACAAGGTGAAGAAGACCGCAAGCACCAGCG
CGAGCGCGAAACCTCAGGCTTCGAGGAAGCGTAAGGCTGCAGACTCTGTG
GAGGAGACGACAACGTCAGGGGCTGCCCCGGCGGCGCCGGCGCGGGTGAC
CAAGAAGCAGAAGGGTGAGTTCAGTTGATCAATTGCGTTGCGAAATTGGT
GATTTGCTTTGTTTGGGGGATGTTTTTCGCGTGTTGGATGATGCTGTTCC
GCGGAATGTTGGGCTAACGGGTATTTGTTACGTTGTGGCAGAAGCTCTGG
CCGTCATCAACCACGCGCCTACCCAGCGCCTCGATGTGTATGTCTTCGGA
ACGAATTGCTATGGTGAATTGGGTCTTGGAGATGCGACGAAAAAGTCTGA
GATCCCTGGTCCGGTCCTGAACCCGAAGCTGCCCGCGGAGTCGGTTGGTG
TGGTGCAGTTGGCTATCGGTGGTGTGCACTCGGCTGCTCTTACGCATGAT
AACAAGATTCTTACATGGGGCGTCAATGATGAGGGTACGCTGGGTAGGGA
TACAAAGGAGGAGCGCAAGGTGGAGGAGAACGGTGATGGCGTGAATGGCG
ATGATGCCAAGGAGGAGTCGGACTCGGACTCTGATGATGATGAGGTTGAC
CTCAATATGAAAGAGGCGACCCCTACGGCTGTGGACTCTGCTCTCTTCCC
TGAGGGTACTGTCTTCACGCAGATTACTGCGACGGATAGTGCCACGTTCG
CTCTCACCCAGGAGGGACGAGTCTATGGTTGGGGTACATTCAGAGTGAGT
TGCCACGCTTATTCTCGAGTCATTATTACTTTGACCTAACGTCGAACAGG
GAAGCAACGGTGTGATTGGGTTTTCTCCCGAGACGAAGATTCAACGACAG
CCAGTCCTGGTTCCCGGTCTTGAGAAAGTGACACACCTTGCGTCTGGCGC
GCAACACGTCCTGGCGCTGACGGCGAAGGGCGCTGTTTTGACCTGGGGTT
GTGAGGAACAGAACCAGCTTGGTCGGAGAATCTCTGGACGTCTGCATGGC
AAGCTCGAGAGTCTCATCCCGGGACAGTGCGCGCTTCCGTCGGATGTCGT
GAGCATCGGAACGGGTTCCTACCACTCCTTTGCTGTTCGCAAGAACGGCC
GGGTGCACGCTTGGGGTTCTAATAACTTCGGTCAGACGGCCGTCCCGATG
AGCGCTGGAGAAAGCGATGCCGTCGTCCTCTACCCGACGGAAGTCAAGTC
TTTCCGCAAGCACGGCAAGATTATCTCTATCTGCGGTGGAAAGGACCACA
GTGTGGCTGTCACCGAAGACGGAAAGTGCCTTTCCTGGGGTCGCGTGGAT
AACAAGGCTCTTGGTATCCCGCTGGCGGACATGCCATCGGATGAACTCGT
GCACGATGAGCATGGACGTCCCCGTATCCTGACGGTTCCAACTCCCCTCA
CCGATATCAAGGAGGAGGTTGTCTTCGCAACCGCCTCTAGTGATCACTCC
TTTGCTATCACCAAAGACGGTCAGGCGTATAGCTGGGGTTTCAACGTACA
GCGTCAGGCCGGACACCGCGATGTGGATGAGGTTGAACGACCAACCCTCC
TCCAAAACAAGCACGTCAACGGAAAGAAGCTGGTTGCTGCTGCAGGAGGA
GGCCAGTTCAGTATGCTCGTTGGAGCTTACTCGCCGCAAGTGAACGGAAC
CGATGCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:1878311..1880070+ >CAN33_53025-T1 ID=CAN33_53025-T1|Name=CAN33_53025-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4734bp|location=Sequence derived from alignment at NKJJ01000020.1:1878311..1880070+ (Aspergillus niger FDAARGOS_311)
ATGCCTCCCAAACGCGCAGCATCTAGCGCCTCAAAGGCCAAAACCGAGAC
TGCCTCGAAGGCTACTGCCGACAAGGTGAAGAAGACCGCAAGCACCAGCG
CGAGCGCGAAACCTCAGGCTTCGAGGAAGCGTAAGGCTGCAGACTCTGTG
GAGGAGACGACAACGTCAGGGGCTGCCCCGGCGGCGCCGGCGCGGGTGAC
CAAGAAGCAGAAGGAAGCTCTGGCCGTCATCAACCACGCGCCTACCCAGC
GCCTCGATGTGTATGTCTTCGGAACGAATTGCTATGGTGAATTGGGTCTT
GGAGATGCGACGAAAAAGTCTGAGATCCCTGGTCCGGTCCTGAACCCGAA
GCTGCCCGCGGAGTCGGTTGGTGTGGTGCAGTTGGCTATCGGTGGTGTGC
ACTCGGCTGCTCTTACGCATGATAACAAGATTCTTACATGGGGCGTCAAT
GATGAGGGTACGCTGGGTAGGGATACAAAGGAGGAGCGCAAGGTGGAGGA
GAACGGTGATGGCGTGAATGGCGATGATGCCAAGGAGGAGTCGGACTCGG
ACTCTGATGATGATGAGGTTGACCTCAATATGAAAGAGGCGACCCCTACG
GCTGTGGACTCTGCTCTCTTCCCTGAGGGTACTGTCTTCACGCAGATTAC
TGCGACGGATAGTGCCACGTTCGCTCTCACCCAGGAGGGACGAGTCTATG
GTTGGGGTACATTCAGAGGAAGCAACGGTGTGATTGGGTTTTCTCCCGAG
ACGAAGATTCAACGACAGCCAGTCCTGGTTCCCGGTCTTGAGAAAGTGAC
ACACCTTGCGTCTGGCGCGCAACACGTCCTGGCGCTGACGGCGAAGGGCG
CTGTTTTGACCTGGGGTTGTGAGGAACAGAACCAGCTTGGTCGGAGAATC
TCTGGACGTCTGCATGGCAAGCTCGAGAGTCTCATCCCGGGACAGTGCGC
GCTTCCGTCGGATGTCGTGAGCATCGGAACGGGTTCCTACCACTCCTTTG
CTGTTCGCAAGAACGGCCGGGTGCACGCTTGGGGTTCTAATAACTTCGGT
CAGACGGCCGTCCCGATGAGCGCTGGAGAAAGCGATGCCGTCGTCCTCTA
CCCGACGGAAGTCAAGTCTTTCCGCAAGCACGGCAAGATTATCTCTATCT
GCGGTGGAAAGGACCACAGTGTGGCTGTCACCGAAGACGGAAAGTGCCTT
TCCTGGGGTCGCGTGGATAACAAGGCTCTTGGTATCCCGCTGGCGGACAT
GCCATCGGATGAACTCGTGCACGATGAGCATGGACGTCCCCGTATCCTGA
CGGTTCCAACTCCCCTCACCGATATCAAGGAGGAGGTTGTCTTCGCAACC
GCCTCTAGTGATCACTCCTTTGCTATCACCAAAGACGGTCAGGCGTATAG
CTGGGGTTTCAACGTACAGCGTCAGGCCGGACACCGCGATGTGGATGAGG
TTGAACGACCAACCCTCCTCCAAAACAAGCACGTCAACGGAAAGAAGCTG
GTTGCTGCTGCAGGAGGAGGCCAGTTCAGTATGCTCGTTGGAGCTTACTC
GCCGCAAGTGAACGGAACCGATGCTTGAATGCCTCCCAAACGCGCAGCAT
CTAGCGCCTCAAAGGCCAAAACCGAGACTGCCTCGAAGGCTACTGCCGAC
AAGGTGAAGAAGACCGCAAGCACCAGCGCGAGCGCGAAACCTCAGGCTTC
GAGGAAGCGTAAGGCTGCAGACTCTGTGGAGGAGACGACAACGTCAGGGG
CTGCCCCGGCGGCGCCGGCGCGGGTGACCAAGAAGCAGAAGGAAGCTCTG
GCCGTCATCAACCACGCGCCTACCCAGCGCCTCGATGTGTATGTCTTCGG
AACGAATTGCTATGGTGAATTGGGTCTTGGAGATGCGACGAAAAAGTCTG
AGATCCCTGGTCCGGTCCTGAACCCGAAGCTGCCCGCGGAGTCGGTTGGT
GTGGTGCAGTTGGCTATCGGTGGTGTGCACTCGGCTGCTCTTACGCATGA
TAACAAGATTCTTACATGGGGCGTCAATGATGAGGGTACGCTGGGTAGGG
ATACAAAGGAGGAGCGCAAGGTGGAGGAGAACGGTGATGGCGTGAATGGC
GATGATGCCAAGGAGGAGTCGGACTCGGACTCTGATGATGATGAGGTTGA
CCTCAATATGAAAGAGGCGACCCCTACGGCTGTGGACTCTGCTCTCTTCC
CTGAGGGTACTGTCTTCACGCAGATTACTGCGACGGATAGTGCCACGTTC
GCTCTCACCCAGGAGGGACGAGTCTATGGTTGGGGTACATTCAGAGGAAG
CAACGGTGTGATTGGGTTTTCTCCCGAGACGAAGATTCAACGACAGCCAG
TCCTGGTTCCCGGTCTTGAGAAAGTGACACACCTTGCGTCTGGCGCGCAA
CACGTCCTGGCGCTGACGGCGAAGGGCGCTGTTTTGACCTGGGGTTGTGA
GGAACAGAACCAGCTTGGTCGGAGAATCTCTGGACGTCTGCATGGCAAGC
TCGAGAGTCTCATCCCGGGACAGTGCGCGCTTCCGTCGGATGTCGTGAGC
ATCGGAACGGGTTCCTACCACTCCTTTGCTGTTCGCAAGAACGGCCGGGT
GCACGCTTGGGGTTCTAATAACTTCGGTCAGACGGCCGTCCCGATGAGCG
CTGGAGAAAGCGATGCCGTCGTCCTCTACCCGACGGAAGTCAAGTCTTTC
CGCAAGCACGGCAAGATTATCTCTATCTGCGGTGGAAAGGACCACAGTGT
GGCTGTCACCGAAGACGGAAAGTGCCTTTCCTGGGGTCGCGTGGATAACA
AGGCTCTTGGTATCCCGCTGGCGGACATGCCATCGGATGAACTCGTGCAC
GATGAGCATGGACGTCCCCGTATCCTGACGGTTCCAACTCCCCTCACCGA
TATCAAGGAGGAGGTTGTCTTCGCAACCGCCTCTAGTGATCACTCCTTTG
CTATCACCAAAGACGGTCAGGCGTATAGCTGGGGTTTCAACGTACAGCGT
CAGGCCGGACACCGCGATGTGGATGAGGTTGAACGACCAACCCTCCTCCA
AAACAAGCACGTCAACGGAAAGAAGCTGGTTGCTGCTGCAGGAGGAGGCC
AGTTCAGTATGCTCGTTGGAGCTTACTCGCCGCAAGTGAACGGAACCGAT
GCTTGAATGCCTCCCAAACGCGCAGCATCTAGCGCCTCAAAGGCCAAAAC
CGAGACTGCCTCGAAGGCTACTGCCGACAAGGTGAAGAAGACCGCAAGCA
CCAGCGCGAGCGCGAAACCTCAGGCTTCGAGGAAGCGTAAGGCTGCAGAC
TCTGTGGAGGAGACGACAACGTCAGGGGCTGCCCCGGCGGCGCCGGCGCG
GGTGACCAAGAAGCAGAAGGAAGCTCTGGCCGTCATCAACCACGCGCCTA
CCCAGCGCCTCGATGTGTATGTCTTCGGAACGAATTGCTATGGTGAATTG
GGTCTTGGAGATGCGACGAAAAAGTCTGAGATCCCTGGTCCGGTCCTGAA
CCCGAAGCTGCCCGCGGAGTCGGTTGGTGTGGTGCAGTTGGCTATCGGTG
GTGTGCACTCGGCTGCTCTTACGCATGATAACAAGATTCTTACATGGGGC
GTCAATGATGAGGGTACGCTGGGTAGGGATACAAAGGAGGAGCGCAAGGT
GGAGGAGAACGGTGATGGCGTGAATGGCGATGATGCCAAGGAGGAGTCGG
ACTCGGACTCTGATGATGATGAGGTTGACCTCAATATGAAAGAGGCGACC
CCTACGGCTGTGGACTCTGCTCTCTTCCCTGAGGGTACTGTCTTCACGCA
GATTACTGCGACGGATAGTGCCACGTTCGCTCTCACCCAGGAGGGACGAG
TCTATGGTTGGGGTACATTCAGAGGAAGCAACGGTGTGATTGGGTTTTCT
CCCGAGACGAAGATTCAACGACAGCCAGTCCTGGTTCCCGGTCTTGAGAA
AGTGACACACCTTGCGTCTGGCGCGCAACACGTCCTGGCGCTGACGGCGA
AGGGCGCTGTTTTGACCTGGGGTTGTGAGGAACAGAACCAGCTTGGTCGG
AGAATCTCTGGACGTCTGCATGGCAAGCTCGAGAGTCTCATCCCGGGACA
GTGCGCGCTTCCGTCGGATGTCGTGAGCATCGGAACGGGTTCCTACCACT
CCTTTGCTGTTCGCAAGAACGGCCGGGTGCACGCTTGGGGTTCTAATAAC
TTCGGTCAGACGGCCGTCCCGATGAGCGCTGGAGAAAGCGATGCCGTCGT
CCTCTACCCGACGGAAGTCAAGTCTTTCCGCAAGCACGGCAAGATTATCT
CTATCTGCGGTGGAAAGGACCACAGTGTGGCTGTCACCGAAGACGGAAAG
TGCCTTTCCTGGGGTCGCGTGGATAACAAGGCTCTTGGTATCCCGCTGGC
GGACATGCCATCGGATGAACTCGTGCACGATGAGCATGGACGTCCCCGTA
TCCTGACGGTTCCAACTCCCCTCACCGATATCAAGGAGGAGGTTGTCTTC
GCAACCGCCTCTAGTGATCACTCCTTTGCTATCACCAAAGACGGTCAGGC
GTATAGCTGGGGTTTCAACGTACAGCGTCAGGCCGGACACCGCGATGTGG
ATGAGGTTGAACGACCAACCCTCCTCCAAAACAAGCACGTCAACGGAAAG
AAGCTGGTTGCTGCTGCAGGAGGAGGCCAGTTCAGTATGCTCGTTGGAGC
TTACTCGCCGCAAGTGAACGGAACCGATGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009091 |
| DBxref | InterPro:IPR000408 |
| DBxref | PFAM:PF13540 |
| DBxref | PFAM:PF00415 |
| Product | Regulator of chromosome condensation (RCC1) repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:1878311..1880070 + |
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