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CAN33_53170-T1, CAN33_53170-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53170-T1
Unique NameCAN33_53170-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1963629..1965114+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53170-T1 ID=CAN33_53170-T1|Name=CAN33_53170-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1486bp|location=Sequence derived from alignment at NKJJ01000020.1:1963629..1965114+ (Aspergillus niger FDAARGOS_311)
ATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTTCTCAGCGGTGCTGC
CGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAACCAGTATGACCTGC
TGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGGTCTTCCCTCTTCTC
GAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAGATGATCCGCGCCAA
GTACGAGCTGTTGAAGCACACCAACATGACCGACTATGTGGCCAACCTGT
GGAAGGAAATTAACGACTCCGACACCATCCCCGACGAGTTCGTCAAGAAG
AGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAGGAGCAGAGCGCCAA
GATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGGCAACCTGCGCAGCG
ACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGCACGGTGTCACCGCC
GATATGGTCAACAGCCTTTTCGACTATGGTCGCTTCCAGTACAGCTGCGG
TAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTTCCGTGTCCTCTCCA
CCGACAACGACAAGGTTGCTTCCGCCACATGGGGTAAGCTCGCCTCGGAG
ATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAAGTCCAGAAGGTCAA
GGACTCGATCGAGACCCGTCTCTTCAACAACCCTCTGGGTCAGCTCCAGA
ACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCTTCTTCAACTACGAC
CCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCCCCCGCCTACATCAA
CACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTACCTCGCCGCCGCCG
TCATCACCAACCGCAACCGTGCCCACAAGAACAGCAACGTCTACCAGAAG
CAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAGGGCTACGAATACTC
CGACCCCATCACCGACTTCGTTAAGGCGCTGTACGTTGACTTCGACTTTG
AGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATGTGTTGCGGAGCGAC
TTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAGGCTGCCCGTCACCT
GATCTCCGAGAGCTACTGCAAGATCCACCAGCGGATCGACATCAAGTATG
TCAATCAACACGAAGAACATTCATTCACGCATTATCTTGCTAACCGATCA
CACCAGGGACCTGTCTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGA
AGTGGATCGTCAACCTGATCCGTGACACTCGTGTCGACGCCAAGATTGAC
TACAAGGAGGGCACTGTGATCATGAACCACCCCCCGCAGTCGGTGTACCA
GCAGGTCATTGAGAAGACCAAGGGTGCTTTCTTCCGCACGCAAGTTCTGA
GGTTCGTCCAATACCCTATCCTATCAATCCATCTCCATCCTTTGTTACTA
ACGCCAAAATGATCCAGTGCTGCCGTTGCGAAATAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1963629..1965114+

>CAN33_53170-T1 ID=CAN33_53170-T1|Name=CAN33_53170-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4077bp|location=Sequence derived from alignment at NKJJ01000020.1:1963629..1965114+ (Aspergillus niger FDAARGOS_311)
ATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTTCTCAGCGGTGCTGC
CGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAACCAGTATGACCTGC
TGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGGTCTTCCCTCTTCTC
GAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAGATGATCCGCGCCAA
GTACGAGCTGTTGAAGCACACCAACATGACCGACTATGTGGCCAACCTGT
GGAAGGAAATTAACGACTCCGACACCATCCCCGACGAGTTCGTCAAGAAG
AGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAGGAGCAGAGCGCCAA
GATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGGCAACCTGCGCAGCG
ACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGCACGGTGTCACCGCC
GATATGGTCAACAGCCTTTTCGACTATGGTCGCTTCCAGTACAGCTGCGG
TAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTTCCGTGTCCTCTCCA
CCGACAACGACAAGGTTGCTTCCGCCACATGGGGTAAGCTCGCCTCGGAG
ATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAAGTCCAGAAGGTCAA
GGACTCGATCGAGACCCGTCTCTTCAACAACCCTCTGGGTCAGCTCCAGA
ACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCTTCTTCAACTACGAC
CCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCCCCCGCCTACATCAA
CACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTACCTCGCCGCCGCCG
TCATCACCAACCGCAACCGTGCCCACAAGAACAGCAACGTCTACCAGAAG
CAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAGGGCTACGAATACTC
CGACCCCATCACCGACTTCGTTAAGGCGCTGTACGTTGACTTCGACTTTG
AGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATGTGTTGCGGAGCGAC
TTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAGGCTGCCCGTCACCT
GATCTCCGAGAGCTACTGCAAGATCCACCAGCGGATCGACATCAAGGACC
TGTCTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGAAGTGGATCGTC
AACCTGATCCGTGACACTCGTGTCGACGCCAAGATTGACTACAAGGAGGG
CACTGTGATCATGAACCACCCCCCGCAGTCGGTGTACCAGCAGGTCATTG
AGAAGACCAAGGGTGCTTTCTTCCGCACGCAAGTTCTGAGTGCTGCCGTT
GCGAAATAAATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTTCTCAG
CGGTGCTGCCGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAACCAGT
ATGACCTGCTGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGGTCTTC
CCTCTTCTCGAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAGATGAT
CCGCGCCAAGTACGAGCTGTTGAAGCACACCAACATGACCGACTATGTGG
CCAACCTGTGGAAGGAAATTAACGACTCCGACACCATCCCCGACGAGTTC
GTCAAGAAGAGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAGGAGCA
GAGCGCCAAGATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGGCAACC
TGCGCAGCGACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGCACGGT
GTCACCGCCGATATGGTCAACAGCCTTTTCGACTATGGTCGCTTCCAGTA
CAGCTGCGGTAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTTCCGTG
TCCTCTCCACCGACAACGACAAGGTTGCTTCCGCCACATGGGGTAAGCTC
GCCTCGGAGATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAAGTCCA
GAAGGTCAAGGACTCGATCGAGACCCGTCTCTTCAACAACCCTCTGGGTC
AGCTCCAGAACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCTTCTTC
AACTACGACCCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCCCCCGC
CTACATCAACACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTACCTCG
CCGCCGCCGTCATCACCAACCGCAACCGTGCCCACAAGAACAGCAACGTC
TACCAGAAGCAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAGGGCTA
CGAATACTCCGACCCCATCACCGACTTCGTTAAGGCGCTGTACGTTGACT
TCGACTTTGAGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATGTGTTG
CGGAGCGACTTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAGGCTGC
CCGTCACCTGATCTCCGAGAGCTACTGCAAGATCCACCAGCGGATCGACA
TCAAGGACCTGTCTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGAAG
TGGATCGTCAACCTGATCCGTGACACTCGTGTCGACGCCAAGATTGACTA
CAAGGAGGGCACTGTGATCATGAACCACCCCCCGCAGTCGGTGTACCAGC
AGGTCATTGAGAAGACCAAGGGTGCTTTCTTCCGCACGCAAGTTCTGAGT
GCTGCCGTTGCGAAATAAATGGCAGCCAACGTTCCTCCTTCCGCTGAGAC
CCTTCTCAGCGGTGCTGCCGCCCACCCGCCCAAGACCGCTGAAGAGATCG
CCAACCAGTATGACCTGCTGCCCAAGCTGATCCCCTACCTCGACCGCCAT
CTGGTCTTCCCTCTTCTCGAGTTCAGCTCCGGCTCCCAGGAAGATGACAA
GGAGATGATCCGCGCCAAGTACGAGCTGTTGAAGCACACCAACATGACCG
ACTATGTGGCCAACCTGTGGAAGGAAATTAACGACTCCGACACCATCCCC
GACGAGTTCGTCAAGAAGAGAGAGGAGGTCCTCGCCAAGTTGCAACACTA
CCAGGAGCAGAGCGCCAAGATCACCGAGCTGCTGCAGGATGAGGATGTCG
TCGGCAACCTGCGCAGCGACAAGGTCGCCAACTTGAAGTTCCTCGAGGAG
GAGCACGGTGTCACCGCCGATATGGTCAACAGCCTTTTCGACTATGGTCG
CTTCCAGTACAGCTGCGGTAGTTACGGCAATGCCGCTGAGCTGCTGTACC
AGTTCCGTGTCCTCTCCACCGACAACGACAAGGTTGCTTCCGCCACATGG
GGTAAGCTCGCCTCGGAGATTCTGACCACCAGCTGGGATGGTGCTATGGA
GGAAGTCCAGAAGGTCAAGGACTCGATCGAGACCCGTCTCTTCAACAACC
CTCTGGGTCAGCTCCAGAACCGCTCCTGGTTGATCCACTGGTCTCTCTTC
CCCTTCTTCAACTACGACCCTGCTCGCGATGTCCTGACCGACCTTTTCTT
CTCCCCCGCCTACATCAACACCATCCAGACTAGCTGCCCCTGGATCCTGC
GCTACCTCGCCGCCGCCGTCATCACCAACCGCAACCGTGCCCACAAGAAC
AGCAACGTCTACCAGAAGCAGTTGAAGGACCTGATCCGCGTCGTTCGCCA
GGAGGGCTACGAATACTCCGACCCCATCACCGACTTCGTTAAGGCGCTGT
ACGTTGACTTCGACTTTGAGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAG
GATGTGTTGCGGAGCGACTTCTTCCTCGTTTCGGCTGCCGATGCCTTCGT
TGAGGCTGCCCGTCACCTGATCTCCGAGAGCTACTGCAAGATCCACCAGC
GGATCGACATCAAGGACCTGTCTACCCGTCTGGGTCTGAACCAGGATGAG
GGTGAGAAGTGGATCGTCAACCTGATCCGTGACACTCGTGTCGACGCCAA
GATTGACTACAAGGAGGGCACTGTGATCATGAACCACCCCCCGCAGTCGG
TGTACCAGCAGGTCATTGAGAAGACCAAGGGTGCTTTCTTCCGCACGCAA
GTTCTGAGTGCTGCCGTTGCGAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
INT6CAN33_53170Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53170-T1.exon1CAN33_53170-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_53170-T1.exon2CAN33_53170-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53170-T1.exon3CAN33_53170-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53170-T1.cdsCAN33_53170-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53170-T1CAN33_53170-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR016650
DBxrefInterPro:IPR019010
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
DBxrefPFAM:PF09440
Producteukaryotic translation initiation factor 3 subunit E
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1963629..1965114 +
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