You are here

Home

CAN33_53270-T1, CAN33_53270-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53270-T1
Unique NameCAN33_53270-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2043937..2045667-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53270-T1 ID=CAN33_53270-T1|Name=CAN33_53270-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1731bp|location=Sequence derived from alignment at NKJJ01000020.1:2043937..2045667- (Aspergillus niger FDAARGOS_311)
ATGTGGACTCATCGGGGGCGGCAATCGGTGACGACCGTCGTCACCAACTC
TTCACGTCGCCTTGTGAGAAACAACCGATCTATCGCCACGCCCTGGCGCA
GATGTTATGCCAGCGGTAACAAGGGACCGGAGCCATCGGGTAACTCGCAC
TGGCTCCGGAATTCTTTGGGCGTGGCAGGAGCAGGCACTGCTGCCTTTTT
CATCTACGATTATGCTACATCCAACCGGAACCAGATAGAGAAGCCAGTGG
AGAAGGTCAAAGACCTTACCAAGTCGGCTGAAGAATTGAGCTCGCAGTAC
GTGCAGCACAAGCGGAGCGTTAAGAGTCCCGGTGTCTATGTCTGGGGCAC
GAACGTCTATCGCGTGGTTGATCCGGACTCGAAGGAGTCCGTGGTGAAGA
CTCCCCGGAAGTTTGCCTACTTTGAAGGTCAAGTGCTTAGAGACCTCAAG
CTCGGAGAGAGGTCCGGGGCAGCCATTACGGAGAACGGCGACTTGGTGCA
ATGGGGCAAGGGCTATTCAGAGACCGAGTTTAAACCCACGAAGACCCTTA
CCGGCAAGAATCTGGCTTCGTTGTGCATGTCTAACGATCGGATCCTTGCA
TTGTCCTCGGACGGCAATGTCTACTCACTACCCATTGCCAAGGAGGACCA
GCTGGGTGGCCGCAAGACCAAGGAGGGCTCATGGGTGCCTTTCCGGTCAG
GAACGTCCAGTATTAGCTACCGCTTGCTGCAGCCGGCTCTCAAGCTGGGC
GAGCGTATAACCGCTCTCGCTAGCGGACTCGACCATGCTCTTCTCTTGAC
CAGCTCCGGCCGAGTGTTCTCTTTTGCTGCTTCTACTGAAAATTACCCTT
CGTTTGGACAGCTCGGTATCCCCGGCTTGACCTGGGCCACTCGCCCCAAG
GGGCCGGTGGATGCCCTTCACGAGATCACTGCGCTCAAGGGCTCGAAGAT
TGTTCAGATTGCTGCGGGTGATTACCACTCGCTCGCCCTTGACAAGGATG
GCAATGTTTTTGCCTTTGGCGATAACTCTTTTGGGCAGCTAGCGATGGAA
TTCAACCCGTCATCGCCCTTCTGCGATACCCCGACTCTGGTACCCATCAG
GAACCTCTACCGCGGTCCCTGGTTGCCTAAGGCCACTCGGGTTGCGGCTG
GAGGTGCCAACAGCTTCTTCACCGTGGATGCGCAGCGCATACTTAGCTCC
AAGGAGGACCCTGCCACCCTCCGTGACCTGGGACGCGTCACTGCCGATAC
CTGGGCTTGCGGACGGGGCATCTGGGGAGCTCTGGGTACCGGCAAATGGA
CCCATGTACAGGACGCTCCCGCCAAGGTGAAGGCATTGAGTGGTCTTTCC
GAATTTGACGAGAAGACCAACCGCCTGACGCCCATCCGCATCCATGATAT
CTCAGTCGGTACGACACACGTTTCCGCAGTTATGGACAACAGTACCCATG
TGGATTCAGCTCCCTCCAGCACCCTGAATGAGACTCGTGACTGGGGATAC
GATGCGCTCTGGTGGGGAGGCAACGAACACTTCCAGCTGGGCACAGGCAA
GCGCAGTAATCTGTCTAAGCCGAACTACATCCACGCCCCGCCGGAGGAGG
CAGACGAGCAGCAGGAAGCGCGCCTCCAGATCATGCCTCGCCACAAGGGC
AAGGTTGATCGTCGCACGGTGAACATGGAGCAGCGCGTGGTATGTGGGCG
ACACATTTCTGCCATCTATTCTGCCGTATAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:2043937..2045667-

>CAN33_53270-T1 ID=CAN33_53270-T1|Name=CAN33_53270-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1731bp|location=Sequence derived from alignment at NKJJ01000020.1:2043937..2045667- (Aspergillus niger FDAARGOS_311)
ATGTGGACTCATCGGGGGCGGCAATCGGTGACGACCGTCGTCACCAACTC
TTCACGTCGCCTTGTGAGAAACAACCGATCTATCGCCACGCCCTGGCGCA
GATGTTATGCCAGCGGTAACAAGGGACCGGAGCCATCGGGTAACTCGCAC
TGGCTCCGGAATTCTTTGGGCGTGGCAGGAGCAGGCACTGCTGCCTTTTT
CATCTACGATTATGCTACATCCAACCGGAACCAGATAGAGAAGCCAGTGG
AGAAGGTCAAAGACCTTACCAAGTCGGCTGAAGAATTGAGCTCGCAGTAC
GTGCAGCACAAGCGGAGCGTTAAGAGTCCCGGTGTCTATGTCTGGGGCAC
GAACGTCTATCGCGTGGTTGATCCGGACTCGAAGGAGTCCGTGGTGAAGA
CTCCCCGGAAGTTTGCCTACTTTGAAGGTCAAGTGCTTAGAGACCTCAAG
CTCGGAGAGAGGTCCGGGGCAGCCATTACGGAGAACGGCGACTTGGTGCA
ATGGGGCAAGGGCTATTCAGAGACCGAGTTTAAACCCACGAAGACCCTTA
CCGGCAAGAATCTGGCTTCGTTGTGCATGTCTAACGATCGGATCCTTGCA
TTGTCCTCGGACGGCAATGTCTACTCACTACCCATTGCCAAGGAGGACCA
GCTGGGTGGCCGCAAGACCAAGGAGGGCTCATGGGTGCCTTTCCGGTCAG
GAACGTCCAGTATTAGCTACCGCTTGCTGCAGCCGGCTCTCAAGCTGGGC
GAGCGTATAACCGCTCTCGCTAGCGGACTCGACCATGCTCTTCTCTTGAC
CAGCTCCGGCCGAGTGTTCTCTTTTGCTGCTTCTACTGAAAATTACCCTT
CGTTTGGACAGCTCGGTATCCCCGGCTTGACCTGGGCCACTCGCCCCAAG
GGGCCGGTGGATGCCCTTCACGAGATCACTGCGCTCAAGGGCTCGAAGAT
TGTTCAGATTGCTGCGGGTGATTACCACTCGCTCGCCCTTGACAAGGATG
GCAATGTTTTTGCCTTTGGCGATAACTCTTTTGGGCAGCTAGCGATGGAA
TTCAACCCGTCATCGCCCTTCTGCGATACCCCGACTCTGGTACCCATCAG
GAACCTCTACCGCGGTCCCTGGTTGCCTAAGGCCACTCGGGTTGCGGCTG
GAGGTGCCAACAGCTTCTTCACCGTGGATGCGCAGCGCATACTTAGCTCC
AAGGAGGACCCTGCCACCCTCCGTGACCTGGGACGCGTCACTGCCGATAC
CTGGGCTTGCGGACGGGGCATCTGGGGAGCTCTGGGTACCGGCAAATGGA
CCCATGTACAGGACGCTCCCGCCAAGGTGAAGGCATTGAGTGGTCTTTCC
GAATTTGACGAGAAGACCAACCGCCTGACGCCCATCCGCATCCATGATAT
CTCAGTCGGTACGACACACGTTTCCGCAGTTATGGACAACAGTACCCATG
TGGATTCAGCTCCCTCCAGCACCCTGAATGAGACTCGTGACTGGGGATAC
GATGCGCTCTGGTGGGGAGGCAACGAACACTTCCAGCTGGGCACAGGCAA
GCGCAGTAATCTGTCTAAGCCGAACTACATCCACGCCCCGCCGGAGGAGG
CAGACGAGCAGCAGGAAGCGCGCCTCCAGATCATGCCTCGCCACAAGGGC
AAGGTTGATCGTCGCACGGTGAACATGGAGCAGCGCGTGGTATGTGGGCG
ACACATTTCTGCCATCTATTCTGCCGTATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_53270CAN33_53270Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53270-T1.cdsCAN33_53270-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53270-T1.exon1CAN33_53270-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53270-T1CAN33_53270-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR000408
DBxrefInterPro:IPR009091
DBxrefPFAM:PF13540
DBxrefPFAM:PF00415
ProductRegulator of chromosome condensation (RCC1) repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2043937..2045667 -
Powered by Drupal