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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2072853..2074480+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_53315-T1 ID=CAN33_53315-T1|Name=CAN33_53315-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1628bp|location=Sequence derived from alignment at NKJJ01000020.1:2072853..2074480+ (Aspergillus niger FDAARGOS_311)
ATGGCGCCCTCCAGCTCTCCAGAACCTGTTGTGGACGAATCCCACGAGTC
CTCTGACTCGGAGGTCGAGCAGACCGAACTGCAATCCCGCGCCCCCAAGA
GAAGACGTCTCTCGGAGTCTTCCACCGACTCCTACGTTGCTCCGGCGCCG
CTCCCCACACTCTCCCGTATCAAGAAGAAGGGCGCAGATGAAGAGAATAA
GCCCGCCACATCGGATAAAGACGAGCCTGTCCTGATCAAGGATGCTCTGG
AGATTGGTCTCAATGATGCGCAGAACTCATTCGCCTCTCTCAACGTGGCG
CCGTGGTTGATCGGCTCCCTAACCACCATGGCTGTTCGCAAACCAACCGC
CATTCAAAAAGCGTGTATTCCTGAGATCCTAAACGGCCGGGACTGCATTG
GTGGAAGCCGGACTGGTTCCGGTAAGACCATTGCCTTCTCAGTGCCCATG
CTGCAGAAATGGGCGGAGGATCCATTCGGTATCTTCGGCCTTGTCCTCAC
TCCAACTCGGTAAGAACCTATCCCCCACTCCCAATGCCCATCATTCATCA
TCTAATCCGATGTGCCTAGTGAACTTGCCCTCCAAATCTACGAACAAATC
AAAGCCATCTCCGCCCCCCAAAGCATGAAACCCCTCCTCATCACCGGCGG
CACCGACATGCGCCCACAAGCCGTGGCCCTCGCACAACGCCCACACGTCG
TGATCGCCACGCCCGGCCGTCTCGCCGACCACATCAACACCTCCGGCTCC
GACACCATCCGCGGCCTGAAGCGCGTCCGCATGGTCGTTCTCGACGAAGC
AGACCGGCTCCTCGCCCCAGGACACGGCAGCATGCTCCCGGACGTGGAAA
CCTGCCTCTCAGCTCTCCCACCCTCCAGCGAGCGCCAAACCCTCCTCTTC
ACAGCAACCCTAACACCGGAAGTGCGCGCGCTGAAATCCATGCCCCGGCC
GTCCACCAAACCCCCCATCTTCGTCACCGAAATCTCCACCGAAAACAACG
CCTCTATCCCCCGACCCTTAAACAAACCTACCTCAAAGTCCCCATGACCC
ACCGCGAAGCCTTCCTCCACGTCCTCCTCTCCACGGAAGCGAACGCCTCC
AAACCAGCCATCATCTTCTGCAACCACACCAAGACGGCGGACTTGCTGGA
GCGCATGCTCCGCAGGCTGTCTCACCGCGTTACATCCCTGCATAGTCTGC
TGCCGCAGTCGGAGCGCAATGCCAATCTGGCGAGGTTCAGAGCGTCCGCG
GCGAGGTTGCTCGTTGCGACGGATGTGGCGTCCCGTGGTTTGGATATTCC
GTCGGTGGAGTTGGTGGTCAATTTTGATGTGCCCAGGAATCCGGATGATT
ATGTGCATCGGGTTGGTCGAACGGCGCGTGCAGGGAGAAAGGGTGAGTCG
GTCACGCTTGTTGGGCAACGGGATGTGAGTCTGGTGTTGGCGATTGAGGA
GAGGGTGGGTAGGCAGATGGAGGAGTGGAGTGAGGAGGGTGTTAGTGTTG
AGGGTAGGGTTGTTAGGACGGGTGTGTTGAAGGAGGTTGGTGAGGCCAAG
AGAGAGGCTGCGGGTGAGATTGAGGAGGGGAGAGATGTGTTGGGAAGGAA
GAGGAATAAGTTGAAGAAGGTGCGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2072853..2074480+ >CAN33_53315-T1 ID=CAN33_53315-T1|Name=CAN33_53315-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4599bp|location=Sequence derived from alignment at NKJJ01000020.1:2072853..2074480+ (Aspergillus niger FDAARGOS_311)
ATGGCGCCCTCCAGCTCTCCAGAACCTGTTGTGGACGAATCCCACGAGTC
CTCTGACTCGGAGGTCGAGCAGACCGAACTGCAATCCCGCGCCCCCAAGA
GAAGACGTCTCTCGGAGTCTTCCACCGACTCCTACGTTGCTCCGGCGCCG
CTCCCCACACTCTCCCGTATCAAGAAGAAGGGCGCAGATGAAGAGAATAA
GCCCGCCACATCGGATAAAGACGAGCCTGTCCTGATCAAGGATGCTCTGG
AGATTGGTCTCAATGATGCGCAGAACTCATTCGCCTCTCTCAACGTGGCG
CCGTGGTTGATCGGCTCCCTAACCACCATGGCTGTTCGCAAACCAACCGC
CATTCAAAAAGCGTGTATTCCTGAGATCCTAAACGGCCGGGACTGCATTG
GTGGAAGCCGGACTGGTTCCGGTAAGACCATTGCCTTCTCAGTGCCCATG
CTGCAGAAATGGGCGGAGGATCCATTCGGTATCTTCGGCCTTGTCCTCAC
TCCAACTCGTGAACTTGCCCTCCAAATCTACGAACAAATCAAAGCCATCT
CCGCCCCCCAAAGCATGAAACCCCTCCTCATCACCGGCGGCACCGACATG
CGCCCACAAGCCGTGGCCCTCGCACAACGCCCACACGTCGTGATCGCCAC
GCCCGGCCGTCTCGCCGACCACATCAACACCTCCGGCTCCGACACCATCC
GCGGCCTGAAGCGCGTCCGCATGGTCGTTCTCGACGAAGCAGACCGGCTC
CTCGCCCCAGGACACGGCAGCATGCTCCCGGACCGAGCGCCAAACCCTCC
TCTTCACAGCAACCCTAACACCGGAAGTGCGCGCGCTGAAATCCATGCCC
CGGCCGTCCACCAAACCCCCCATCTTCGTCACCGAAATCTCCACCGAAAA
CAACGCCTCTATCCCCCGACCCTTAAACAAACCTACCTCAAAGTCCCCAT
GACCCACCGCGAAGCCTTCCTCCACGTCCTCCTCTCCACGGAAGCGAACG
CCTCCAAACCAGCCATCATCTTCTGCAACCACACCAAGACGGCGGACTTG
CTGGAGCGCATGCTCCGCAGGCTGTCTCACCGCGTTACATCCCTGCATAG
TCTGCTGCCGCAGTCGGAGCGCAATGCCAATCTGGCGAGGTTCAGAGCGT
CCGCGGCGAGGTTGCTCGTTGCGACGGATGTGGCGTCCCGTGGTTTGGAT
ATTCCGTCGGTGGAGTTGGTGGTCAATTTTGATGTGCCCAGGAATCCGGA
TGATTATGTGCATCGGGTTGGTCGAACGGCGCGTGCAGGGAGAAAGGGTG
AGTCGGTCACGCTTGTTGGGCAACGGGATGTGAGTCTGGTGTTGGCGATT
GAGGAGAGGGTGGGTAGGCAGATGGAGGAGTGGAGTGAGGAGGGTGTTAG
TGTTGAGGGTAGGGTTGTTAGGACGGGTGTGTTGAAGGAGGTTGGTGAGG
CCAAGAGAGAGGCTGCGGGTGAGATTGAGGAGGGGAGAGATGTGTTGGGA
AGGAAGAGGAATAAGTTGAAGAAGGTGCGGTAGATGGCGCCCTCCAGCTC
TCCAGAACCTGTTGTGGACGAATCCCACGAGTCCTCTGACTCGGAGGTCG
AGCAGACCGAACTGCAATCCCGCGCCCCCAAGAGAAGACGTCTCTCGGAG
TCTTCCACCGACTCCTACGTTGCTCCGGCGCCGCTCCCCACACTCTCCCG
TATCAAGAAGAAGGGCGCAGATGAAGAGAATAAGCCCGCCACATCGGATA
AAGACGAGCCTGTCCTGATCAAGGATGCTCTGGAGATTGGTCTCAATGAT
GCGCAGAACTCATTCGCCTCTCTCAACGTGGCGCCGTGGTTGATCGGCTC
CCTAACCACCATGGCTGTTCGCAAACCAACCGCCATTCAAAAAGCGTGTA
TTCCTGAGATCCTAAACGGCCGGGACTGCATTGGTGGAAGCCGGACTGGT
TCCGGTAAGACCATTGCCTTCTCAGTGCCCATGCTGCAGAAATGGGCGGA
GGATCCATTCGGTATCTTCGGCCTTGTCCTCACTCCAACTCGTGAACTTG
CCCTCCAAATCTACGAACAAATCAAAGCCATCTCCGCCCCCCAAAGCATG
AAACCCCTCCTCATCACCGGCGGCACCGACATGCGCCCACAAGCCGTGGC
CCTCGCACAACGCCCACACGTCGTGATCGCCACGCCCGGCCGTCTCGCCG
ACCACATCAACACCTCCGGCTCCGACACCATCCGCGGCCTGAAGCGCGTC
CGCATGGTCGTTCTCGACGAAGCAGACCGGCTCCTCGCCCCAGGACACGG
CAGCATGCTCCCGGACCGAGCGCCAAACCCTCCTCTTCACAGCAACCCTA
ACACCGGAAGTGCGCGCGCTGAAATCCATGCCCCGGCCGTCCACCAAACC
CCCCATCTTCGTCACCGAAATCTCCACCGAAAACAACGCCTCTATCCCCC
GACCCTTAAACAAACCTACCTCAAAGTCCCCATGACCCACCGCGAAGCCT
TCCTCCACGTCCTCCTCTCCACGGAAGCGAACGCCTCCAAACCAGCCATC
ATCTTCTGCAACCACACCAAGACGGCGGACTTGCTGGAGCGCATGCTCCG
CAGGCTGTCTCACCGCGTTACATCCCTGCATAGTCTGCTGCCGCAGTCGG
AGCGCAATGCCAATCTGGCGAGGTTCAGAGCGTCCGCGGCGAGGTTGCTC
GTTGCGACGGATGTGGCGTCCCGTGGTTTGGATATTCCGTCGGTGGAGTT
GGTGGTCAATTTTGATGTGCCCAGGAATCCGGATGATTATGTGCATCGGG
TTGGTCGAACGGCGCGTGCAGGGAGAAAGGGTGAGTCGGTCACGCTTGTT
GGGCAACGGGATGTGAGTCTGGTGTTGGCGATTGAGGAGAGGGTGGGTAG
GCAGATGGAGGAGTGGAGTGAGGAGGGTGTTAGTGTTGAGGGTAGGGTTG
TTAGGACGGGTGTGTTGAAGGAGGTTGGTGAGGCCAAGAGAGAGGCTGCG
GGTGAGATTGAGGAGGGGAGAGATGTGTTGGGAAGGAAGAGGAATAAGTT
GAAGAAGGTGCGGTAGATGGCGCCCTCCAGCTCTCCAGAACCTGTTGTGG
ACGAATCCCACGAGTCCTCTGACTCGGAGGTCGAGCAGACCGAACTGCAA
TCCCGCGCCCCCAAGAGAAGACGTCTCTCGGAGTCTTCCACCGACTCCTA
CGTTGCTCCGGCGCCGCTCCCCACACTCTCCCGTATCAAGAAGAAGGGCG
CAGATGAAGAGAATAAGCCCGCCACATCGGATAAAGACGAGCCTGTCCTG
ATCAAGGATGCTCTGGAGATTGGTCTCAATGATGCGCAGAACTCATTCGC
CTCTCTCAACGTGGCGCCGTGGTTGATCGGCTCCCTAACCACCATGGCTG
TTCGCAAACCAACCGCCATTCAAAAAGCGTGTATTCCTGAGATCCTAAAC
GGCCGGGACTGCATTGGTGGAAGCCGGACTGGTTCCGGTAAGACCATTGC
CTTCTCAGTGCCCATGCTGCAGAAATGGGCGGAGGATCCATTCGGTATCT
TCGGCCTTGTCCTCACTCCAACTCGTGAACTTGCCCTCCAAATCTACGAA
CAAATCAAAGCCATCTCCGCCCCCCAAAGCATGAAACCCCTCCTCATCAC
CGGCGGCACCGACATGCGCCCACAAGCCGTGGCCCTCGCACAACGCCCAC
ACGTCGTGATCGCCACGCCCGGCCGTCTCGCCGACCACATCAACACCTCC
GGCTCCGACACCATCCGCGGCCTGAAGCGCGTCCGCATGGTCGTTCTCGA
CGAAGCAGACCGGCTCCTCGCCCCAGGACACGGCAGCATGCTCCCGGACC
GAGCGCCAAACCCTCCTCTTCACAGCAACCCTAACACCGGAAGTGCGCGC
GCTGAAATCCATGCCCCGGCCGTCCACCAAACCCCCCATCTTCGTCACCG
AAATCTCCACCGAAAACAACGCCTCTATCCCCCGACCCTTAAACAAACCT
ACCTCAAAGTCCCCATGACCCACCGCGAAGCCTTCCTCCACGTCCTCCTC
TCCACGGAAGCGAACGCCTCCAAACCAGCCATCATCTTCTGCAACCACAC
CAAGACGGCGGACTTGCTGGAGCGCATGCTCCGCAGGCTGTCTCACCGCG
TTACATCCCTGCATAGTCTGCTGCCGCAGTCGGAGCGCAATGCCAATCTG
GCGAGGTTCAGAGCGTCCGCGGCGAGGTTGCTCGTTGCGACGGATGTGGC
GTCCCGTGGTTTGGATATTCCGTCGGTGGAGTTGGTGGTCAATTTTGATG
TGCCCAGGAATCCGGATGATTATGTGCATCGGGTTGGTCGAACGGCGCGT
GCAGGGAGAAAGGGTGAGTCGGTCACGCTTGTTGGGCAACGGGATGTGAG
TCTGGTGTTGGCGATTGAGGAGAGGGTGGGTAGGCAGATGGAGGAGTGGA
GTGAGGAGGGTGTTAGTGTTGAGGGTAGGGTTGTTAGGACGGGTGTGTTG
AAGGAGGTTGGTGAGGCCAAGAGAGAGGCTGCGGGTGAGATTGAGGAGGG
GAGAGATGTGTTGGGAAGGAAGAGGAATAAGTTGAAGAAGGTGCGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | Putative RNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2072853..2074480 + |
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