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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2153846..2154880- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_53430-T1 ID=CAN33_53430-T1|Name=CAN33_53430-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1035bp|location=Sequence derived from alignment at NKJJ01000020.1:2153846..2154880- (Aspergillus niger FDAARGOS_311)
ATGTCGGGCCTTAATACTACTGCAGAATATGAATTCAAGAAACAATTGAC
CTATGGCTGCCATGCAAAGATCGATGGCTACGGCACCTCATATGGCTACG
TCCCCTCGCTGGCTGCGGGCATTGTATTTTGTGTCCTCTTCGGTCTGTCG
ATGTTGCTCCATACATTGCAGCTGGTGTGGAAGAGGACCTGGTGGTGCTC
TGTCTTCGTTCTTGGATGTATCAGTATGTGAACCCCTCCTGCAAGAGTCC
TTTCCAACCATACGCTAACACAACCATTACAGCGGAGGTCCTGGGCTGGG
CAGCACGTACCTGGTCTGCTGAATGTCCATACAATGGAACCGCCTTTCTC
ATGCAAATCTCTACCTTGATCATCGGTACGCGAGCAGGACCACGCATATC
AAATTCATGAAACAGATACTAATTTTCTCTCTTTAGCCCCCACTTTCTTT
ACCGCCGGGATCTACGTGCTCCTGGGCCGTTTCATCCACCTGTTGGGGCC
CGAGACCTCAATTTTGAGTCCGAAACTCTATCTCTGGATTTTCGTCACCT
GCGATATCATCTCATTGGTTGTCCAGGCTGTGGGTGGTGGCATGGCGTCG
ATGGAAGTCAACAAGGTCAACGGCGATACTGCTCCAGGCACGCACACCAT
GGTCGCCGGTATCGTGTTCCAGCTGGCGTCTATCACGGTCTTTGTTTTCC
TCGCCGCTGATTTCGTCCGTCGCACTCTCCGTATGCGGATCTTGCAAACC
ATGACCGGCACGATCATCCCTCTTCTCGGTGCGATGATCTTCTCTGTCCT
CTGCATCTACATCCGGAGTATCTATCGAACCATTGAGCTGTCGCAGGGGT
GGTCTGGCTACTTGATCACGCACGAACGGTACTTCATTGTCCTGGACGGC
ATTATGATGGTCTTAGCTGTGGGTGTGTTTAACATCTTCCATCCAGGATG
GCTGCTACCTAAGAATGAGGTCAAGCCATTCCACCGCGAGATCTACTCTC
CTGACGGGGTAGCCAGTGGAATGGAGATGCGGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2153846..2154880- >CAN33_53430-T1 ID=CAN33_53430-T1|Name=CAN33_53430-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2745bp|location=Sequence derived from alignment at NKJJ01000020.1:2153846..2154880- (Aspergillus niger FDAARGOS_311)
CCCCCACTTTCTTTACCGCCGGGATCTACGTGCTCCTGGGCCGTTTCATC
CACCTGTTGGGGCCCGAGACCTCAATTTTGAGTCCGAAACTCTATCTCTG
GATTTTCGTCACCTGCGATATCATCTCATTGGTTGTCCAGGCTGTGGGTG
GTGGCATGGCGTCGATGGAAGTCAACAAGGTCAACGGCGATACTGCTCCA
GGCACGCACACCATGGTCGCCGGTATCGTGTTCCAGCTGGCGTCTATCAC
GGTCTTTGTTTTCCTCGCCGCTGATTTCGTCCGTCGCACTCTCCGTATGC
GGATCTTGCAAACCATGACCGGCACGATCATCCCTCTTCTCGGTGCGATG
ATCTTCTCTGTCCTCTGCATCTACATCCGGAGTATCTATCGAACCATTGA
GCTGTCGCAGGGGTGGTCTGGCTACTTGATCACGCACGAACGGTACTTCA
TTGTCCTGGACGGCATTATGATGGTCTTAGCTGTGGGTGTGTTTAACATC
TTCCATCCAGGATGGCTGCTACCTAAGAATGAGGTCAAGCCATTCCACCG
CGAGATCTACTCTCCTGACGGGGTAGCCAGTGGAATGGAGATGCGGTAAC
GGAGGTCCTGGGCTGGGCAGCACGTACCTGGTCTGCTGAATGTCCATACA
ATGGAACCGCCTTTCTCATGCAAATCTCTACCTTGATCATCGATGTCGGG
CCTTAATACTACTGCAGAATATGAATTCAAGAAACAATTGACCTATGGCT
GCCATGCAAAGATCGATGGCTACGGCACCTCATATGGCTACGTCCCCTCG
CTGGCTGCGGGCATTGTATTTTGTGTCCTCTTCGGTCTGTCGATGTTGCT
CCATACATTGCAGCTGGTGTGGAAGAGGACCTGGTGGTGCTCTGTCTTCG
TTCTTGGATGTATCACCCCCACTTTCTTTACCGCCGGGATCTACGTGCTC
CTGGGCCGTTTCATCCACCTGTTGGGGCCCGAGACCTCAATTTTGAGTCC
GAAACTCTATCTCTGGATTTTCGTCACCTGCGATATCATCTCATTGGTTG
TCCAGGCTGTGGGTGGTGGCATGGCGTCGATGGAAGTCAACAAGGTCAAC
GGCGATACTGCTCCAGGCACGCACACCATGGTCGCCGGTATCGTGTTCCA
GCTGGCGTCTATCACGGTCTTTGTTTTCCTCGCCGCTGATTTCGTCCGTC
GCACTCTCCGTATGCGGATCTTGCAAACCATGACCGGCACGATCATCCCT
CTTCTCGGTGCGATGATCTTCTCTGTCCTCTGCATCTACATCCGGAGTAT
CTATCGAACCATTGAGCTGTCGCAGGGGTGGTCTGGCTACTTGATCACGC
ACGAACGGTACTTCATTGTCCTGGACGGCATTATGATGGTCTTAGCTGTG
GGTGTGTTTAACATCTTCCATCCAGGATGGCTGCTACCTAAGAATGAGGT
CAAGCCATTCCACCGCGAGATCTACTCTCCTGACGGGGTAGCCAGTGGAA
TGGAGATGCGGTAACGGAGGTCCTGGGCTGGGCAGCACGTACCTGGTCTG
CTGAATGTCCATACAATGGAACCGCCTTTCTCATGCAAATCTCTACCTTG
ATCATCGATGTCGGGCCTTAATACTACTGCAGAATATGAATTCAAGAAAC
AATTGACCTATGGCTGCCATGCAAAGATCGATGGCTACGGCACCTCATAT
GGCTACGTCCCCTCGCTGGCTGCGGGCATTGTATTTTGTGTCCTCTTCGG
TCTGTCGATGTTGCTCCATACATTGCAGCTGGTGTGGAAGAGGACCTGGT
GGTGCTCTGTCTTCGTTCTTGGATGTATCACCCCCACTTTCTTTACCGCC
GGGATCTACGTGCTCCTGGGCCGTTTCATCCACCTGTTGGGGCCCGAGAC
CTCAATTTTGAGTCCGAAACTCTATCTCTGGATTTTCGTCACCTGCGATA
TCATCTCATTGGTTGTCCAGGCTGTGGGTGGTGGCATGGCGTCGATGGAA
GTCAACAAGGTCAACGGCGATACTGCTCCAGGCACGCACACCATGGTCGC
CGGTATCGTGTTCCAGCTGGCGTCTATCACGGTCTTTGTTTTCCTCGCCG
CTGATTTCGTCCGTCGCACTCTCCGTATGCGGATCTTGCAAACCATGACC
GGCACGATCATCCCTCTTCTCGGTGCGATGATCTTCTCTGTCCTCTGCAT
CTACATCCGGAGTATCTATCGAACCATTGAGCTGTCGCAGGGGTGGTCTG
GCTACTTGATCACGCACGAACGGTACTTCATTGTCCTGGACGGCATTATG
ATGGTCTTAGCTGTGGGTGTGTTTAACATCTTCCATCCAGGATGGCTGCT
ACCTAAGAATGAGGTCAAGCCATTCCACCGCGAGATCTACTCTCCTGACG
GGGTAGCCAGTGGAATGGAGATGCGGTAACGGAGGTCCTGGGCTGGGCAG
CACGTACCTGGTCTGCTGAATGTCCATACAATGGAACCGCCTTTCTCATG
CAAATCTCTACCTTGATCATCGATGTCGGGCCTTAATACTACTGCAGAAT
ATGAATTCAAGAAACAATTGACCTATGGCTGCCATGCAAAGATCGATGGC
TACGGCACCTCATATGGCTACGTCCCCTCGCTGGCTGCGGGCATTGTATT
TTGTGTCCTCTTCGGTCTGTCGATGTTGCTCCATACATTGCAGCTGGTGT
GGAAGAGGACCTGGTGGTGCTCTGTCTTCGTTCTTGGATGTATCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2153846..2154880 - |
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