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CAN33_53450-T1, CAN33_53450-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53450-T1
Unique NameCAN33_53450-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2175851..2176961+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53450-T1 ID=CAN33_53450-T1|Name=CAN33_53450-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1111bp|location=Sequence derived from alignment at NKJJ01000020.1:2175851..2176961+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCAGAACCC
CTCCGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCGAGAGCA
ACACACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTCTCTGCC
CGTGAGGTAAGGATGATTTGGTTTTTTCATACATAGCCTCCGTCCGTGTA
CAGATCAGAGGCGTCGAGAGTTTTTGAATCGCGGAAATTGCCAACATACG
AGACGTTTTGGGGAAATATCAAATATCCATGTGGATATTGTGCGTGTGTG
CGGTCCGCACCTGGATGATGTATACGTGTGCTTGGGGACTGAATACCACC
AGCATCGAGGAAAAGAAGAAAAAAAAAAAAAAGAAACGAATTGAATCGTC
CCAACAACCGACCGACACTCTGATCTGCTGCGCGAACTGGGGATAAGAAA
ATTATTTGTTTTCTCGGATTGTGCGCAATTTGATATTGACTCTACTATCA
CAATAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTCATCATCTTCGTCCC
TGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCAGCGGTACGATTTTC
CACTCCACAATCATCACCTCCACACCAAATAAAATCTACACCAACATCAA
CCCCGGAATGTGCCAGCCACATGATACCCACAACCCCCGGAGTGTTGGCA
ATTAAAAAAACGAAACACCAGAACCATAACTGACAATGATATCATAGCCT
GACCCGTGAGCTCGAGAAGAAGTTCTCCGACCGCCACGTTCTCTTCGTTG
CTCAGCGCCGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGCTCTCGTTCC
AACCAGAAGCAGAAGCGTCCCCGTTCCCGCACTCTGACTGCTGTCCACGA
CGCCATCCTCACCGACCTCGTCTACCCCGTCGAGATCGTCGGCAAGCGTA
CCCGCACCAAGGAGGACGGCTCCAAGACCCTCAAGGTCATCCTGGACGAG
AAGGAGCGTGGTGGTGTTGACCACCGCCTTGATGCCTACGGCGAGGTCTA
CCGTCGGTTGACTGGCCGTGCTGTTGTCTTTGAATTCCCCCAGGGTGGTG
CCGACTACTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2175851..2176961+

>CAN33_53450-T1 ID=CAN33_53450-T1|Name=CAN33_53450-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1809bp|location=Sequence derived from alignment at NKJJ01000020.1:2175851..2176961+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCAGAACCC
CTCCGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCGAGAGCA
ACACACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTCTCTGCC
CGTGAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTCATCATCTTCGTCCC
TGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCAGCGCCTGACCCGTG
AGCTCGAGAAGAAGTTCTCCGACCGCCACGTTCTCTTCGTTGCTCAGCGC
CGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGCTCTCGTTCCAACCAGAA
GCAGAAGCGTCCCCGTTCCCGCACTCTGACTGCTGTCCACGACGCCATCC
TCACCGACCTCGTCTACCCCGTCGAGATCGTCGGCAAGCGTACCCGCACC
AAGGAGGACGGCTCCAAGACCCTCAAGGTCATCCTGGACGAGAAGGAGCG
TGGTGGTGTTGACCACCGCCTTGATGCCTACGGCGAGGTCTACCGTCGGT
TGACTGGCCGTGCTGTTGTCTTTGAATTCCCCCAGGGTGGTGCCGACTAC
TAGATGGCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCAGAA
CCCCTCCGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCGAGA
GCAACACACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTCTCT
GCCCGTGAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTCATCATCTTCGT
CCCTGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCAGCGCCTGACCC
GTGAGCTCGAGAAGAAGTTCTCCGACCGCCACGTTCTCTTCGTTGCTCAG
CGCCGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGCTCTCGTTCCAACCA
GAAGCAGAAGCGTCCCCGTTCCCGCACTCTGACTGCTGTCCACGACGCCA
TCCTCACCGACCTCGTCTACCCCGTCGAGATCGTCGGCAAGCGTACCCGC
ACCAAGGAGGACGGCTCCAAGACCCTCAAGGTCATCCTGGACGAGAAGGA
GCGTGGTGGTGTTGACCACCGCCTTGATGCCTACGGCGAGGTCTACCGTC
GGTTGACTGGCCGTGCTGTTGTCTTTGAATTCCCCCAGGGTGGTGCCGAC
TACTAGATGGCTGCTATCAACAAGATCGCCATCAACTCGCCGTCGAGGCA
GAACCCCTCCGAGCTGGAGACCGCGATCGCCGGTGCTCTCTTCGACCTCG
AGAGCAACACACAGGACCTGAAGGCCACCCTCAGGCCCCTGCAGTTTGTC
TCTGCCCGTGAGGTCGAGGTCGGCCACGGCAAGAAGGCAGTCATCATCTT
CGTCCCTGTCCCTCTCCTCCAGGGCTTCCACAAGATCCAGCAGCGCCTGA
CCCGTGAGCTCGAGAAGAAGTTCTCCGACCGCCACGTTCTCTTCGTTGCT
CAGCGCCGCATCCTGCCCCGCCCCAAGCGCTCCGCCAGCTCTCGTTCCAA
CCAGAAGCAGAAGCGTCCCCGTTCCCGCACTCTGACTGCTGTCCACGACG
CCATCCTCACCGACCTCGTCTACCCCGTCGAGATCGTCGGCAAGCGTACC
CGCACCAAGGAGGACGGCTCCAAGACCCTCAAGGTCATCCTGGACGAGAA
GGAGCGTGGTGGTGTTGACCACCGCCTTGATGCCTACGGCGAGGTCTACC
GTCGGTTGACTGGCCGTGCTGTTGTCTTTGAATTCCCCCAGGGTGGTGCC
GACTACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP15CAN33_53450Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53450-T1.exon1CAN33_53450-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_53450-T1.exon2CAN33_53450-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53450-T1.exon3CAN33_53450-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53450-T1.cdsCAN33_53450-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53450-T1CAN33_53450-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000554
DBxrefPFAM:PF01251
Product40S ribosomal protein S7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2175851..2176961 +
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