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CAN33_53505-T1, CAN33_53505-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53505-T1
Unique NameCAN33_53505-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2213511..2214566+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53505-T1 ID=CAN33_53505-T1|Name=CAN33_53505-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1056bp|location=Sequence derived from alignment at NKJJ01000020.1:2213511..2214566+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCTGTTTCCCCTGCTGCCGCTAGGGCCGAGCCAGGCCAATGGAA
GAAGAACCTCTCAGCCCACGTCATTTGCCCCGAGTGCAAAGAGGTTCCCC
CGAATCTGGAGTTCCCTGGCTCTCACGAAACTGTTTGCGGCTCATGTGGT
CTGGTTCTCGCTGATCGGGAGATTGACATGCACTCAGAATGGCGTACATT
CTCCAATGACGATCAGAACAACGACGACCCTTCTCGTGTTGGAGATGCCA
TGAACCCGCTTCTCAACGGTGATCAACTAGAGACCCAGATTGCTAGTGGT
GGGTCGGGCCGCGTTCGCGACCTTTACCGTGCTCAGAACAAACAATCGAG
TGAAAAGGCAAACAAGGCTCTTCTGGCAGCCTACAAGGAAATTGGTGCTC
TTTGCGATGGTTTTAACATTCAGAAGAACGTGGCAGACACAGCGAAGTAT
CTCTTCAAGATTGTGGACGATGCCAAGGCATTCAAGGGAAAGTCCCAGGA
TGTGATCATTGCAGGCTGTATATTTATCGCCTGTCGCCAGTGCAAGGTGC
CACGTACCTTCACTGAGATCTTCGCGGTGACCAAGGTCACAAGGAAGGAA
ATTGGGCGTATCTACAAAGCTCTGGAGAAGTTTTTCACTGCACAGAACCT
CGAGCGGATCAATGCCGTGGTCTCCAGCGGAGGTGTCCCTGATCCCAACG
ACACATACACCGCCACTACTTCCACCAAGCCTAGTGACCTTTGCAACCGT
TTCTGTAACCTTCTGGATCTGCCCTTCCAGGTTACCAGCGTCTCCTCTGC
TTTATCCGATCGCGTGACAACGATGGGAGATTTGGCCGGACGTTCTCCCC
TGTCCATCGTGGCAGCCTGCATCTACATGGCATCGTACCTGATGGGACAC
GGCAAGAGCGCCAAGGAGATATCCCACGTGGCCCATGTCAGCGATGGTAC
GATCCGCGGTGCTTACAAGCAGCTATATGCTGAAAGAGAGCGCCTCATCG
ATCCCGAGTGGATCAAAGATGGGAAGGGTGACCTGAAGAACCTACCTAAC
AGTTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2213511..2214566+

>CAN33_53505-T1 ID=CAN33_53505-T1|Name=CAN33_53505-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1056bp|location=Sequence derived from alignment at NKJJ01000020.1:2213511..2214566+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCTGTTTCCCCTGCTGCCGCTAGGGCCGAGCCAGGCCAATGGAA
GAAGAACCTCTCAGCCCACGTCATTTGCCCCGAGTGCAAAGAGGTTCCCC
CGAATCTGGAGTTCCCTGGCTCTCACGAAACTGTTTGCGGCTCATGTGGT
CTGGTTCTCGCTGATCGGGAGATTGACATGCACTCAGAATGGCGTACATT
CTCCAATGACGATCAGAACAACGACGACCCTTCTCGTGTTGGAGATGCCA
TGAACCCGCTTCTCAACGGTGATCAACTAGAGACCCAGATTGCTAGTGGT
GGGTCGGGCCGCGTTCGCGACCTTTACCGTGCTCAGAACAAACAATCGAG
TGAAAAGGCAAACAAGGCTCTTCTGGCAGCCTACAAGGAAATTGGTGCTC
TTTGCGATGGTTTTAACATTCAGAAGAACGTGGCAGACACAGCGAAGTAT
CTCTTCAAGATTGTGGACGATGCCAAGGCATTCAAGGGAAAGTCCCAGGA
TGTGATCATTGCAGGCTGTATATTTATCGCCTGTCGCCAGTGCAAGGTGC
CACGTACCTTCACTGAGATCTTCGCGGTGACCAAGGTCACAAGGAAGGAA
ATTGGGCGTATCTACAAAGCTCTGGAGAAGTTTTTCACTGCACAGAACCT
CGAGCGGATCAATGCCGTGGTCTCCAGCGGAGGTGTCCCTGATCCCAACG
ACACATACACCGCCACTACTTCCACCAAGCCTAGTGACCTTTGCAACCGT
TTCTGTAACCTTCTGGATCTGCCCTTCCAGGTTACCAGCGTCTCCTCTGC
TTTATCCGATCGCGTGACAACGATGGGAGATTTGGCCGGACGTTCTCCCC
TGTCCATCGTGGCAGCCTGCATCTACATGGCATCGTACCTGATGGGACAC
GGCAAGAGCGCCAAGGAGATATCCCACGTGGCCCATGTCAGCGATGGTAC
GATCCGCGGTGCTTACAAGCAGCTATATGCTGAAAGAGAGCGCCTCATCG
ATCCCGAGTGGATCAAAGATGGGAAGGGTGACCTGAAGAACCTACCTAAC
AGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0017025TBP-class protein binding
Vocabulary: Biological Process
TermDefinition
GO:0070897transcription preinitiation complex assembly
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_53505CAN33_53505Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53505-T1.exon1CAN33_53505-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53505-T1.cdsCAN33_53505-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53505-T1CAN33_53505-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262PAY
DBxrefInterPro:IPR036915
DBxrefInterPro:IPR023486
DBxrefInterPro:IPR013137
DBxrefInterPro:IPR013150
DBxrefInterPro:IPR013763
DBxrefInterPro:IPR000812
DBxrefPFAM:PF08271
DBxrefPFAM:PF00382
ProductTranscription factor TFIIB repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2213511..2214566 +
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