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CAN33_53555-T1, CAN33_53555-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53555-T1
Unique NameCAN33_53555-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2254973..2255970-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53555-T1 ID=CAN33_53555-T1|Name=CAN33_53555-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=998bp|location=Sequence derived from alignment at NKJJ01000020.1:2254973..2255970- (Aspergillus niger FDAARGOS_311)
ATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGGTGA
GTTTTCCTCTATAATTTTGGTGGTGATATAAATGGGGTGGATTTGAAGAT
TGGAGGTTTGGATGGGATATGGTGTGACTTGGGATGCTAACGGTTGATGT
GTTTTAGCCACCGCTGTCGCCCACTGCAAGGTATGGGAATTACATTCTCT
GTCTATCTATATCTCCTGGTCTAGGATTATCGTGTTGCGGATGCCGATGT
GTCGTTCGAATTGGTCAATATTGGTCTTGGAGGTTCGGAAGGATCTGGGT
ATCATTCGACATTTAAGGAGGATTATGAAGCTTGTGGATTGCCCGGAAGC
ACGGGGGAAGCGTTATCGAGTATCGAAACGAAGAACGACACGGCACAAGG
AAATTTTGAAGGAAGATCAATTACGTGAAGGGAAAAGTGAAGAAGACATG
CGCAACCAAACCGAACGACACATCTGCATCCGCACCGCATATATCAGATG
AACCAAATCGCAACGGAAAGAAGGAGAACGTCAAAACTGATTCGTTTTTT
CCCAACTACAGCAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCCCCTC
TCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTACACTCACCTACCCG
TCGGGTTTTACGAAGTGCCATGGACGGGGTAATTGACAGGATTATTCAAT
GAAATAGGTCTACGAGCCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCG
GTGTCGACATCCGCGTCCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTT
TACGCCATCCGTCAGGCCATCGCCAAGTCCATCGTCGCCTACTACCAGAA
GTACGTCGATGAGCACTCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGT
ACGACCGCACACTCCTCGTCGCCGACAACCGTCGTACGGAGCCCAAGAAG
TTCGGTGGTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCTACCGTTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2254973..2255970-

>CAN33_53555-T1 ID=CAN33_53555-T1|Name=CAN33_53555-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1728bp|location=Sequence derived from alignment at NKJJ01000020.1:2254973..2255970- (Aspergillus niger FDAARGOS_311)
GTCTACGAGCCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGGTGTCGA
CATCCGCGTCCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTTACGCCA
TCCGTCAGGCCATCGCCAAGTCCATCGTCGCCTACTACCAGAAGTACGTC
GATGAGCACTCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTACGACCG
CACACTCCTCGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGTTCGGTG
GTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCTACCGTTAACAAGGCAAG
GGCATGATCCGGGTCAACGGCCAGCCCCTCTCTCTGGTCCAGCCTGAGAT
CCTCCGCTTCAAGCCACCGCTGTCGCCCACTGCAAGATGGCTTCCGTCCC
GAGTGTGCAATGCTTCGGCAAGAAGAAGACGGGTCTACGAGCCCCTCCTG
ATCGTTGGAGCCGACAAGTTCGCCGGTGTCGACATCCGCGTCCGCGTCTC
CGGTGGTGGTCACACCTCCCAGGTTTACGCCATCCGTCAGGCCATCGCCA
AGTCCATCGTCGCCTACTACCAGAAGTACGTCGATGAGCACTCCAAGAAC
CAGCTGAAGCAGGCTCTTGTCCAGTACGACCGCACACTCCTCGTCGCCGA
CAACCGTCGTACGGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTC
GCTACCAGAAGTCCTACCGTTAACAAGGCAAGGGCATGATCCGGGTCAAC
GGCCAGCCCCTCTCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGCCACC
GCTGTCGCCCACTGCAAGATGGCTTCCGTCCCGAGTGTGCAATGCTTCGG
CAAGAAGAAGACGGGTCTACGAGCCCCTCCTGATCGTTGGAGCCGACAAG
TTCGCCGGTGTCGACATCCGCGTCCGCGTCTCCGGTGGTGGTCACACCTC
CCAGGTTTACGCCATCCGTCAGGCCATCGCCAAGTCCATCGTCGCCTACT
ACCAGAAGTACGTCGATGAGCACTCCAAGAACCAGCTGAAGCAGGCTCTT
GTCCAGTACGACCGCACACTCCTCGTCGCCGACAACCGTCGTACGGAGCC
CAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCTACC
GTTAACAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCCCCTCTCTCTG
GTCCAGCCTGAGATCCTCCGCTTCAAGCCACCGCTGTCGCCCACTGCAAG
ATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGGTCT
ACGAGCCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGGTGTCGACATC
CGCGTCCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTTACGCCATCCG
TCAGGCCATCGCCAAGTCCATCGTCGCCTACTACCAGAAGTACGTCGATG
AGCACTCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTACGACCGCACA
CTCCTCGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGTTCGGTGGTCG
TGGTGCCCGCGCTCGCTACCAGAAGTCCTACCGTTAACAAGGCAAGGGCA
TGATCCGGGTCAACGGCCAGCCCCTCTCTCTGGTCCAGCCTGAGATCCTC
CGCTTCAAGCCACCGCTGTCGCCCACTGCAAGATGGCTTCCGTCCCGAGT
GTGCAATGCTTCGGCAAGAAGAAGACGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_53555CAN33_53555Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53555-T1CAN33_53555-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53555-T1.cdsCAN33_53555-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53555-T1.exon4CAN33_53555-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_53555-T1.exon3CAN33_53555-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_53555-T1.exon2CAN33_53555-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53555-T1.exon1CAN33_53555-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR020574
DBxrefInterPro:IPR000754
DBxrefInterPro:IPR014721
DBxrefPFAM:PF00380
ProductRibosomal protein S9/S16 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2254973..2255970 -
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