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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2264733..2266458- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_53575-T1 ID=CAN33_53575-T1|Name=CAN33_53575-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1726bp|location=Sequence derived from alignment at NKJJ01000020.1:2264733..2266458- (Aspergillus niger FDAARGOS_311)
ATGGATCCCAGATCTCATCCTTCACGGCCCCCATCCACCAGCCTACCCCA
GGGCTCCACGCCTCTGTCTTCGACACCTATCTCGAGCATGCCTATGCCTC
AGTACACCATGCAGCCTCAATACCCTGTGTCCCAGCCGCATACTCTTCCC
CCGCTGCAGCCTCATCACAGTCAATCCCCTGTCCCTCACTCCTACATGGG
CCAGCCGTACCGGCCGGATCTGTCGAGGTATCCCGCATCTACTCACGATG
TCTACGCGTCTTCCGCGGCTCCTATCATGCCTCACACCACCGTGGGTAGT
CTGCCTCCCTCGTCGTTCCTGTCCCATCCCAATCCGCAGGCACAACCCCA
GCCGTCGCAACCTTACCCTCCGCCTCATAGCGTGCTGCCTCCCGCGTCCA
GCGCGCAGACCTATCCCCAGCCGATTGCGCCGGCGCCTCCGCGTGATCGT
CGCTCGGATTTCTCCGGTCTTCCGTCAGGTGCTTTCAGCTACTCCGATAA
CAAGGGAACGCCTTGGATGAACCCCGACCCTGTTGCAAGTGCAAACGGTG
CTCCCCCGTATGCTGCGAAGGAACCTCCCAGGACACAGGTTGTTGGGTCG
CAGGGCCGCCGCGGAATTTTGCCGAGCGTTCCGGGACGCGCGACTCCCGT
CACGAACGGTGTCAATGGTACCGCGAAGAACACTACCATTCCGGCCAAGG
ATGCGGACGGAAAGTTCCCTTGCCCGCACTGTAACAAGACCTATCTTCAT
GCGAAGCATCTGAAGCGCCATTTGCTCAGACGTGAGTGCCCCTCCTTCCA
TCTGGATAATTCGGTAGCGCATGGCGGGGATTGAATCGTTCCGATGACTA
ATCTTTGTTTTCTTCGGTAGACACTGGAGACCGTCCGTACATGTGTGTGC
TCTGCAAGGATACCTTTTCTCGCAGTGATATTCTCAAGCGTCACTTCCAG
AAGTGCTCGTTGCGACGTGGTAACCCTACTGGGGCGACTCACCTGTCGCA
CCCTCAGGCACACTTGAAGCGGTCTCAAGCTGCGCAGAATGCCGTTAAGC
CCGTTCAGGATGAAGTCAATACCACCGTCCCGCATCCCAACGGTATGCCG
GGTGCTACGTATGGCGAGGCGCCCGTGAATGGCAATGGCATGGCTCCCGG
TCGCCCCGGATATCCGGAACAGCAGCCTTTGGGTTTCTCCATGCCTTCCG
TCAATGGGATGAACCGTGGTCAGCCCGAAGACGCGTTCCCGGGCGGACAG
CCTCACCAGCGTGGACCCTGGCTTGCTGCTCCCAAGCAGAACCCGTACAT
GGTGCAGCCTGGCGCAGATGCAACTGGCCAGCAGCTGAATGTTGATCGTC
CTCCTATTGAGCAGGTAAAGCCCCCGGTTGTTCAAGACCCTAAACGTCCT
GTCATGCCTGGACCTCCCAATCACGCTGGCGAAATTGACTGGACTTCGAT
GTTTCAGCCCGGAGCGTCCGACGGTTACATCAATCCCGTCTTCCCCCAGA
CCATGGCGTCCGGCCAGGAGCCTATCCACGCTCACGTCGATACCGAACGC
AAGTTTTACCCCACCACCACCGCTGGTCCCCAGGAGGGTGGGATGAACGG
TCTCTACCTGGCTTCGACCACGTTGAGTGGCGACGGTAAGTGAAGGAGTC
CTGGAACTCAATCCCGCTCTGCGTATGGATGACGGCATGCTGATCCCCGA
ATCCCAGGTACCGTCCAGCCTGCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2264733..2266458- >CAN33_53575-T1 ID=CAN33_53575-T1|Name=CAN33_53575-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4662bp|location=Sequence derived from alignment at NKJJ01000020.1:2264733..2266458- (Aspergillus niger FDAARGOS_311)
CCTGCTAGACACTGGAGACCGTCCGTACATGTGTGTGCTCTGCAAGGATA
CCTTTTCTCGCAGTGATATTCTCAAGCGTCACTTCCAGAAGTGCTCGTTG
CGACGTGGTAACCCTACTGGGGCGACTCACCTGTCGCACCCTCAGGCACA
CTTGAAGCGGTCTCAAGCTGCGCAGAATGCCGTTAAGCCCGTTCAGGATG
AAGTCAATACCACCGTCCCGCATCCCAACGGTATGCCGGGTGCTACGTAT
GGCGAGGCGCCCGTGAATGGCAATGGCATGGCTCCCGGTCGCCCCGGATA
TCCGGAACAGCAGCCTTTGGGTTTCTCCATGCCTTCCGTCAATGGGATGA
ACCGTGGTCAGCCCGAAGACGCGTTCCCGGGCGGACAGCCTCACCAGCGT
GGACCCTGGCTTGCTGCTCCCAAGCAGAACCCGTACATGGTGCAGCCTGG
CGCAGATGCAACTGGCCAGCAGCTGAATGTTGATCGTCCTCCTATTGAGC
AGGTAAAGCCCCCGGTTGTTCAAGACCCTAAACGTCCTGTCATGCCTGGA
CCTCCCAATCACGCTGGCGAAATTGACTGGACTTCGATGTTTCAGCCCGG
AGCGTCCGACGGTTACATCAATCCCGTCTTCCCCCAGACCATGGCGTCCG
GCCAGGAGCCTATCCACGCTCACGTCGATACCGAACGCAAGTTTTACCCC
ACCACCACCGCTGGTCCCCAGGAGGGTGGGATGAACGGTCTCTACCTGGC
TTCGACCACGTTGAGTGGCGACGATGGATCCCAGATCTCATCCTTCACGG
CCCCCATCCACCAGCCTACCCCAGGGCTCCACGCCTCTGTCTTCGACACC
TATCTCGAGCATGCCTATGCCTCAGTACACCATGCAGCCTCAATACCCTG
TGTCCCAGCCGCATACTCTTCCCCCGCTGCAGCCTCATCACAGTCAATCC
CCTGTCCCTCACTCCTACATGGGCCAGCCGTACCGGCCGGATCTGTCGAG
GTATCCCGCATCTACTCACGATGTCTACGCGTCTTCCGCGGCTCCTATCA
TGCCTCACACCACCGTGGGTAGTCTGCCTCCCTCGTCGTTCCTGTCCCAT
CCCAATCCGCAGGCACAACCCCAGCCGTCGCAACCTTACCCTCCGCCTCA
TAGCGTGCTGCCTCCCGCGTCCAGCGCGCAGACCTATCCCCAGCCGATTG
CGCCGGCGCCTCCGCGTGATCGTCGCTCGGATTTCTCCGGTCTTCCGTCA
GGTGCTTTCAGCTACTCCGATAACAAGGGAACGCCTTGGATGAACCCCGA
CCCTGTTGCAAGTGCAAACGGTGCTCCCCCGTATGCTGCGAAGGAACCTC
CCAGGACACAGGTTGTTGGGTCGCAGGGCCGCCGCGGAATTTTGCCGAGC
GTTCCGGGACGCGCGACTCCCGTCACGAACGGTGTCAATGGTACCGCGAA
GAACACTACCATTCCGGCCAAGGATGCGGACGGAAAGTTCCCTTGCCCGC
ACTGTAACAAGACCTATCTTCATGCGAAGCATCTGAAGCGCCATTTGCTC
AGACCCTGCTAGACACTGGAGACCGTCCGTACATGTGTGTGCTCTGCAAG
GATACCTTTTCTCGCAGTGATATTCTCAAGCGTCACTTCCAGAAGTGCTC
GTTGCGACGTGGTAACCCTACTGGGGCGACTCACCTGTCGCACCCTCAGG
CACACTTGAAGCGGTCTCAAGCTGCGCAGAATGCCGTTAAGCCCGTTCAG
GATGAAGTCAATACCACCGTCCCGCATCCCAACGGTATGCCGGGTGCTAC
GTATGGCGAGGCGCCCGTGAATGGCAATGGCATGGCTCCCGGTCGCCCCG
GATATCCGGAACAGCAGCCTTTGGGTTTCTCCATGCCTTCCGTCAATGGG
ATGAACCGTGGTCAGCCCGAAGACGCGTTCCCGGGCGGACAGCCTCACCA
GCGTGGACCCTGGCTTGCTGCTCCCAAGCAGAACCCGTACATGGTGCAGC
CTGGCGCAGATGCAACTGGCCAGCAGCTGAATGTTGATCGTCCTCCTATT
GAGCAGGTAAAGCCCCCGGTTGTTCAAGACCCTAAACGTCCTGTCATGCC
TGGACCTCCCAATCACGCTGGCGAAATTGACTGGACTTCGATGTTTCAGC
CCGGAGCGTCCGACGGTTACATCAATCCCGTCTTCCCCCAGACCATGGCG
TCCGGCCAGGAGCCTATCCACGCTCACGTCGATACCGAACGCAAGTTTTA
CCCCACCACCACCGCTGGTCCCCAGGAGGGTGGGATGAACGGTCTCTACC
TGGCTTCGACCACGTTGAGTGGCGACGATGGATCCCAGATCTCATCCTTC
ACGGCCCCCATCCACCAGCCTACCCCAGGGCTCCACGCCTCTGTCTTCGA
CACCTATCTCGAGCATGCCTATGCCTCAGTACACCATGCAGCCTCAATAC
CCTGTGTCCCAGCCGCATACTCTTCCCCCGCTGCAGCCTCATCACAGTCA
ATCCCCTGTCCCTCACTCCTACATGGGCCAGCCGTACCGGCCGGATCTGT
CGAGGTATCCCGCATCTACTCACGATGTCTACGCGTCTTCCGCGGCTCCT
ATCATGCCTCACACCACCGTGGGTAGTCTGCCTCCCTCGTCGTTCCTGTC
CCATCCCAATCCGCAGGCACAACCCCAGCCGTCGCAACCTTACCCTCCGC
CTCATAGCGTGCTGCCTCCCGCGTCCAGCGCGCAGACCTATCCCCAGCCG
ATTGCGCCGGCGCCTCCGCGTGATCGTCGCTCGGATTTCTCCGGTCTTCC
GTCAGGTGCTTTCAGCTACTCCGATAACAAGGGAACGCCTTGGATGAACC
CCGACCCTGTTGCAAGTGCAAACGGTGCTCCCCCGTATGCTGCGAAGGAA
CCTCCCAGGACACAGGTTGTTGGGTCGCAGGGCCGCCGCGGAATTTTGCC
GAGCGTTCCGGGACGCGCGACTCCCGTCACGAACGGTGTCAATGGTACCG
CGAAGAACACTACCATTCCGGCCAAGGATGCGGACGGAAAGTTCCCTTGC
CCGCACTGTAACAAGACCTATCTTCATGCGAAGCATCTGAAGCGCCATTT
GCTCAGACCCTGCTAGACACTGGAGACCGTCCGTACATGTGTGTGCTCTG
CAAGGATACCTTTTCTCGCAGTGATATTCTCAAGCGTCACTTCCAGAAGT
GCTCGTTGCGACGTGGTAACCCTACTGGGGCGACTCACCTGTCGCACCCT
CAGGCACACTTGAAGCGGTCTCAAGCTGCGCAGAATGCCGTTAAGCCCGT
TCAGGATGAAGTCAATACCACCGTCCCGCATCCCAACGGTATGCCGGGTG
CTACGTATGGCGAGGCGCCCGTGAATGGCAATGGCATGGCTCCCGGTCGC
CCCGGATATCCGGAACAGCAGCCTTTGGGTTTCTCCATGCCTTCCGTCAA
TGGGATGAACCGTGGTCAGCCCGAAGACGCGTTCCCGGGCGGACAGCCTC
ACCAGCGTGGACCCTGGCTTGCTGCTCCCAAGCAGAACCCGTACATGGTG
CAGCCTGGCGCAGATGCAACTGGCCAGCAGCTGAATGTTGATCGTCCTCC
TATTGAGCAGGTAAAGCCCCCGGTTGTTCAAGACCCTAAACGTCCTGTCA
TGCCTGGACCTCCCAATCACGCTGGCGAAATTGACTGGACTTCGATGTTT
CAGCCCGGAGCGTCCGACGGTTACATCAATCCCGTCTTCCCCCAGACCAT
GGCGTCCGGCCAGGAGCCTATCCACGCTCACGTCGATACCGAACGCAAGT
TTTACCCCACCACCACCGCTGGTCCCCAGGAGGGTGGGATGAACGGTCTC
TACCTGGCTTCGACCACGTTGAGTGGCGACGATGGATCCCAGATCTCATC
CTTCACGGCCCCCATCCACCAGCCTACCCCAGGGCTCCACGCCTCTGTCT
TCGACACCTATCTCGAGCATGCCTATGCCTCAGTACACCATGCAGCCTCA
ATACCCTGTGTCCCAGCCGCATACTCTTCCCCCGCTGCAGCCTCATCACA
GTCAATCCCCTGTCCCTCACTCCTACATGGGCCAGCCGTACCGGCCGGAT
CTGTCGAGGTATCCCGCATCTACTCACGATGTCTACGCGTCTTCCGCGGC
TCCTATCATGCCTCACACCACCGTGGGTAGTCTGCCTCCCTCGTCGTTCC
TGTCCCATCCCAATCCGCAGGCACAACCCCAGCCGTCGCAACCTTACCCT
CCGCCTCATAGCGTGCTGCCTCCCGCGTCCAGCGCGCAGACCTATCCCCA
GCCGATTGCGCCGGCGCCTCCGCGTGATCGTCGCTCGGATTTCTCCGGTC
TTCCGTCAGGTGCTTTCAGCTACTCCGATAACAAGGGAACGCCTTGGATG
AACCCCGACCCTGTTGCAAGTGCAAACGGTGCTCCCCCGTATGCTGCGAA
GGAACCTCCCAGGACACAGGTTGTTGGGTCGCAGGGCCGCCGCGGAATTT
TGCCGAGCGTTCCGGGACGCGCGACTCCCGTCACGAACGGTGTCAATGGT
ACCGCGAAGAACACTACCATTCCGGCCAAGGATGCGGACGGAAAGTTCCC
TTGCCCGCACTGTAACAAGACCTATCTTCATGCGAAGCATCTGAAGCGCC
ATTTGCTCAGAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| Product | Zinc-finger double domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2264733..2266458 - |
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