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CAN33_5370-T1, CAN33_5370-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5370-T1
Unique NameCAN33_5370-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:981440..982129-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5370-T1 ID=CAN33_5370-T1|Name=CAN33_5370-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=690bp|location=Sequence derived from alignment at NKJJ01000019.1:981440..982129- (Aspergillus niger FDAARGOS_311)
ATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGATGTATG
TCGCCTTTGCGCCCGGATCGCCTATTCAGAAACCCAACCAGGAATGCTGA
CTTTTGGTGCAGATGGAGAAGCAGTTTGCCGTTAAGGGTTGGTCCGGACA
TCTCTTTTTCGAACTCGTCTCATGACTCACGATTATGCAGCTGTTGAACA
TCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCAACTCC
GCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGGAATTC
CCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAGAGCAA
GGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAAGATTA
TCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACGTCGAA
TACGACAGAGATACCACGATCTTCGGTAGGTGATACATGGCTGTGTGGCT
TGTCTGGGGGGTGGAACGCCAGCTAACAGAAGGATAGCCATGCGTATGCA
GTTTTACGCCATCGAGATCGCCAGGTGAGTCCTTTCGTTTGGATAAGCAC
CGACAGCAATTGGATACTTATACATGGATTAGAAACCGTGCTGGTCTCAA
CGACTGGATCTACGAGCGCGCGCAGAAGGCTAAGAAATAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:981440..982129-

>CAN33_5370-T1 ID=CAN33_5370-T1|Name=CAN33_5370-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2250bp|location=Sequence derived from alignment at NKJJ01000019.1:981440..982129- (Aspergillus niger FDAARGOS_311)
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTT
GAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCA
ACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGG
AATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAG
AGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAA
GATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACG
TCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGT
TAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGAT
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTT
GAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCA
ACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGG
AATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAG
AGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAA
GATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACG
TCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGT
TAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGAT
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTT
GAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCA
ACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGG
AATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAG
AGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAA
GATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACG
TCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGT
TAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGAT
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTT
GAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCA
ACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGG
AATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAG
AGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAA
GATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACG
TCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGT
TAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGAT
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTT
GAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCA
ACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGG
AATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAG
AGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAA
GATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACG
TCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGT
TAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_5370CAN33_5370Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5370-T1CAN33_5370-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5370-T1.cdsCAN33_5370-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5370-T1.exon5CAN33_5370-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_5370-T1.exon4CAN33_5370-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_5370-T1.exon3CAN33_5370-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_5370-T1.exon2CAN33_5370-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_5370-T1.exon1CAN33_5370-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG0926506Z
DBxrefInterPro:IPR021148
DBxrefInterPro:IPR023139
DBxrefPFAM:PF04669
ProductPolysaccharide biosynthesis family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:981440..982129 -
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