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CAN33_53775-T1, CAN33_53775-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53775-T1
Unique NameCAN33_53775-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2388667..2389891-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53775-T1 ID=CAN33_53775-T1|Name=CAN33_53775-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1225bp|location=Sequence derived from alignment at NKJJ01000020.1:2388667..2389891- (Aspergillus niger FDAARGOS_311)
ATGACGATGGTCATTGAGAACCAGAACCGCCAATACGGCGGGATGGGCTT
CGATAACGTGTATCAACACAACATGCACCACAGCGCTCCGCAGTTCACCG
ACCCATGGACCGCTCAAACTTCGTCCCATTCCACTCCCCCGGTCTACGCG
ACTTCCATGGGACCCAGCCAGATTGGCCTCAGCCATGTTAAGCAGGAGGA
AGTGAGCCGCCCACCGATGTCTATGCCATACTCGAGTATTCCCGTTTCCG
CTCCCTCGATGGTCGCCGGGAGCAACTATCCTACTGCTACTGCTTCGAGT
TACCCCGGTCCGGAGATGATGGGTTTGTCGCACGACATGCCGCGCACTTC
TTTCGATCAAGCTCCGGCCTATACCACCGCCTCGCCCATGACCAGCTTCG
CGCCTGCGAGCTACGCCCCGCTTAGCTACGCTCCGTCTATGCACCACCAC
CAGGACCGTCGGATATCTCATGCGTAAGTTTACCTCATCATCTGAAGCTT
TCTGCGGTGTGTATATGGAGGGAAATATGCTTACATTCATTTTTTCATCT
TGTGTAGTGATGCTCGTGTCGGTCAATCGCAACCCCCTTCCGCCCCAACA
TTCGGAGATGCTCTTGATGCCAGCCGCGGAATGGTCGCGCTCAGCCAGGA
TATGACACCTCGCAATATCTACGGCCCTCGCAGCTCGCGAGGCTCGGGTG
ACTCCTACGGTTTCCCCTCGACACACTCTTCTGGATCGTCGATCTCTTCC
GGCGGAAACTACCCCTACTATTCCGCCTCTGTCGCATCTGTGGAGTCCTC
TGTGACTGACTACAGCTCTACTACCTCGGAATCTTACGAGAACGGCCACC
TGTCGCGGACGCTGCCTCGCCCGTCGAACCTGTTGACGGGAAGTGCGCCT
CCGGGACCCCAGTCGATGATGAGCCAGTTTAGCTCCAAGATGCCGTCCAA
CACCCAGAAGAAGCACAAGTGCAAGGTGTGCGACAAGCGGTTTACCCGCC
CGTCGTCTCTTCAGACCCATATGTACAGTCACACTGGTGAAAAACGTAAG
TTCCAGAACGAGTCTCTTTTAGTAGTGGTCTGTGATACTAATAGTCGGGA
ATCTAGCATTCGCATGTGACGTGGAAGGCTGTGGCCGTCATTTCTCGGTC
GTCTCTAACCTGCGGCGGCACAAGAAGGTCCACAAAGGAGAAAAGGAAGG
TGCTTCGGGCGAAGACGAAGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2388667..2389891-

>CAN33_53775-T1 ID=CAN33_53775-T1|Name=CAN33_53775-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3240bp|location=Sequence derived from alignment at NKJJ01000020.1:2388667..2389891- (Aspergillus niger FDAARGOS_311)
CATTCGCATGTGACGTGGAAGGCTGTGGCCGTCATTTCTCGGTCGTCTCT
AACCTGCGGCGGCACAAGAAGGTCCACAAAGGAGAAAAGGAAGGTGCTTC
GGGCGAAGACGAAGAGTAATGATGCTCGTGTCGGTCAATCGCAACCCCCT
TCCGCCCCAACATTCGGAGATGCTCTTGATGCCAGCCGCGGAATGGTCGC
GCTCAGCCAGGATATGACACCTCGCAATATCTACGGCCCTCGCAGCTCGC
GAGGCTCGGGTGACTCCTACGGTTTCCCCTCGACACACTCTTCTGGATCG
TCGATCTCTTCCGGCGGAAACTACCCCTACTATTCCGCCTCTGTCGCATC
TGTGGAGTCCTCTGTGACTGACTACAGCTCTACTACCTCGGAATCTTACG
AGAACGGCCACCTGTCGCGGACGCTGCCTCGCCCGTCGAACCTGTTGACG
GGAAGTGCGCCTCCGGGACCCCAGTCGATGATGAGCCAGTTTAGCTCCAA
GATGCCGTCCAACACCCAGAAGAAGCACAAGTGCAAGGTGTGCGACAAGC
GGTTTACCCGCCCGTCGTCTCTTCAGACCCATATGTACAGTCACACTGGT
GAAAAACATGACGATGGTCATTGAGAACCAGAACCGCCAATACGGCGGGA
TGGGCTTCGATAACGTGTATCAACACAACATGCACCACAGCGCTCCGCAG
TTCACCGACCCATGGACCGCTCAAACTTCGTCCCATTCCACTCCCCCGGT
CTACGCGACTTCCATGGGACCCAGCCAGATTGGCCTCAGCCATGTTAAGC
AGGAGGAAGTGAGCCGCCCACCGATGTCTATGCCATACTCGAGTATTCCC
GTTTCCGCTCCCTCGATGGTCGCCGGGAGCAACTATCCTACTGCTACTGC
TTCGAGTTACCCCGGTCCGGAGATGATGGGTTTGTCGCACGACATGCCGC
GCACTTCTTTCGATCAAGCTCCGGCCTATACCACCGCCTCGCCCATGACC
AGCTTCGCGCCTGCGAGCTACGCCCCGCTTAGCTACGCTCCGTCTATGCA
CCACCACCAGGACCGTCGGATATCTCATGCCATTCGCATGTGACGTGGAA
GGCTGTGGCCGTCATTTCTCGGTCGTCTCTAACCTGCGGCGGCACAAGAA
GGTCCACAAAGGAGAAAAGGAAGGTGCTTCGGGCGAAGACGAAGAGTAAT
GATGCTCGTGTCGGTCAATCGCAACCCCCTTCCGCCCCAACATTCGGAGA
TGCTCTTGATGCCAGCCGCGGAATGGTCGCGCTCAGCCAGGATATGACAC
CTCGCAATATCTACGGCCCTCGCAGCTCGCGAGGCTCGGGTGACTCCTAC
GGTTTCCCCTCGACACACTCTTCTGGATCGTCGATCTCTTCCGGCGGAAA
CTACCCCTACTATTCCGCCTCTGTCGCATCTGTGGAGTCCTCTGTGACTG
ACTACAGCTCTACTACCTCGGAATCTTACGAGAACGGCCACCTGTCGCGG
ACGCTGCCTCGCCCGTCGAACCTGTTGACGGGAAGTGCGCCTCCGGGACC
CCAGTCGATGATGAGCCAGTTTAGCTCCAAGATGCCGTCCAACACCCAGA
AGAAGCACAAGTGCAAGGTGTGCGACAAGCGGTTTACCCGCCCGTCGTCT
CTTCAGACCCATATGTACAGTCACACTGGTGAAAAACATGACGATGGTCA
TTGAGAACCAGAACCGCCAATACGGCGGGATGGGCTTCGATAACGTGTAT
CAACACAACATGCACCACAGCGCTCCGCAGTTCACCGACCCATGGACCGC
TCAAACTTCGTCCCATTCCACTCCCCCGGTCTACGCGACTTCCATGGGAC
CCAGCCAGATTGGCCTCAGCCATGTTAAGCAGGAGGAAGTGAGCCGCCCA
CCGATGTCTATGCCATACTCGAGTATTCCCGTTTCCGCTCCCTCGATGGT
CGCCGGGAGCAACTATCCTACTGCTACTGCTTCGAGTTACCCCGGTCCGG
AGATGATGGGTTTGTCGCACGACATGCCGCGCACTTCTTTCGATCAAGCT
CCGGCCTATACCACCGCCTCGCCCATGACCAGCTTCGCGCCTGCGAGCTA
CGCCCCGCTTAGCTACGCTCCGTCTATGCACCACCACCAGGACCGTCGGA
TATCTCATGCCATTCGCATGTGACGTGGAAGGCTGTGGCCGTCATTTCTC
GGTCGTCTCTAACCTGCGGCGGCACAAGAAGGTCCACAAAGGAGAAAAGG
AAGGTGCTTCGGGCGAAGACGAAGAGTAATGATGCTCGTGTCGGTCAATC
GCAACCCCCTTCCGCCCCAACATTCGGAGATGCTCTTGATGCCAGCCGCG
GAATGGTCGCGCTCAGCCAGGATATGACACCTCGCAATATCTACGGCCCT
CGCAGCTCGCGAGGCTCGGGTGACTCCTACGGTTTCCCCTCGACACACTC
TTCTGGATCGTCGATCTCTTCCGGCGGAAACTACCCCTACTATTCCGCCT
CTGTCGCATCTGTGGAGTCCTCTGTGACTGACTACAGCTCTACTACCTCG
GAATCTTACGAGAACGGCCACCTGTCGCGGACGCTGCCTCGCCCGTCGAA
CCTGTTGACGGGAAGTGCGCCTCCGGGACCCCAGTCGATGATGAGCCAGT
TTAGCTCCAAGATGCCGTCCAACACCCAGAAGAAGCACAAGTGCAAGGTG
TGCGACAAGCGGTTTACCCGCCCGTCGTCTCTTCAGACCCATATGTACAG
TCACACTGGTGAAAAACATGACGATGGTCATTGAGAACCAGAACCGCCAA
TACGGCGGGATGGGCTTCGATAACGTGTATCAACACAACATGCACCACAG
CGCTCCGCAGTTCACCGACCCATGGACCGCTCAAACTTCGTCCCATTCCA
CTCCCCCGGTCTACGCGACTTCCATGGGACCCAGCCAGATTGGCCTCAGC
CATGTTAAGCAGGAGGAAGTGAGCCGCCCACCGATGTCTATGCCATACTC
GAGTATTCCCGTTTCCGCTCCCTCGATGGTCGCCGGGAGCAACTATCCTA
CTGCTACTGCTTCGAGTTACCCCGGTCCGGAGATGATGGGTTTGTCGCAC
GACATGCCGCGCACTTCTTTCGATCAAGCTCCGGCCTATACCACCGCCTC
GCCCATGACCAGCTTCGCGCCTGCGAGCTACGCCCCGCTTAGCTACGCTC
CGTCTATGCACCACCACCAGGACCGTCGGATATCTCATGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_53775CAN33_53775Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53775-T1CAN33_53775-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53775-T1.cdsCAN33_53775-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53775-T1.exon3CAN33_53775-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_53775-T1.exon2CAN33_53775-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53775-T1.exon1CAN33_53775-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF12874
DBxrefPFAM:PF00096
ProductZinc-finger double domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2388667..2389891 -
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