You are here

Home

CAN33_53790-T1, CAN33_53790-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53790-T1
Unique NameCAN33_53790-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2415451..2416768-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53790-T1 ID=CAN33_53790-T1|Name=CAN33_53790-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1318bp|location=Sequence derived from alignment at NKJJ01000020.1:2415451..2416768- (Aspergillus niger FDAARGOS_311)
ATGGGCCGATTCGGTTTCAAAAAGTCCGGGGACGATGACGAGGATTCCGG
CAATCGTCTGGCACTTTTCGGCTCCAGATCGAAGAGCAAGAGCCCTGCGC
CGCCTGCCAACCCCTACGCTAAACCTATCCCGACCGACCCTTACACCAAG
GCCAAGATGCAGGCGGGTGTGGCTCCTCTGCCAGCCGGAGAACAACCGCC
CGCAGCTGGCCCCTCTGGTGCCCATAACATCCCCGGAGATAACAAGTATC
AAGGGTATGCGCCGAATCGATATGGAAACCAAGGCGGCTATGGATCCGAC
CGCTTTGGTGGCGGGGGTCCTGCTGCCCCTGCCGCTTCCCGGTACGGCCC
TGGCGGCTATGGAGGATTAGGTAGCGCCGATCCCAATGACCCCGCGGCGG
CAGATGGCAACAGAGATGCGCTTTTTGGAGGGGCTCGGGATCGGGCACAG
CAACAACAGCAGGCCGGCCCTCCCCCGCCTTACTCCGAGGGCGGAGCTGC
GTATGGCGGAGGCAGCAACGAGTACAACACTTCCACATACCAGGAGCGCC
ACCTTACTGCTGAGGAGGAAGAGGAGGAAGAAATTCAGACCATCAAGCAG
GATATCCGTTTCATCAAACAGGGCGACGTCGCCTCAACTCGCAATGCACT
CCGTGTGGCTGCCCAGGCCGAAGAGACGGGTCGAGAGACACTTGCTCGTT
TGGGTGCTCAGGGAGAGCGTATCCATGATGCCGAGAAGAGTTTGGATGTT
GCTACAGTCGAGGGACGGATCGCGGAGGAGAAGGCTAAGGAGTTGAAGAC
ACTCAACAAGAGTATGTTCGCTGTGCACGTGTCCAATCCTTTCACCAGTT
CCCGGCGCCGGCGAGAGCGTGATGAGCGAATCTTGAACACCCACCGAGCA
GAGCGGGAAACTCGCGAGGGTACCGAGAAGGAGGCTTTCAAGACCAACCA
GCGGATGGAGCGCACGTTCAGAGACATCGACAAGGAGGCGGCCAAGCAGA
CCACGCGCAACAGGACCAACATTACCGATCGTGCCAAGTACCAATTCGAG
GCGGACAGCGAGGATGAGGCGATGGAGAACGAGATCGAACAGAATTTGGA
CCTGCTTGGAGGAGCTGCGAGCCGCCTGAATGGACTTGCTCGGGCGACAG
GTCGCGAGCTGGACGAACAGAACCGTCATTTGGAGCGTATCACGGCCAAG
GTAAGTCCTTTGGAGCTCTTGTCATCACGAACTCGAATCTTGACTAACTG
CGCTGTAGAGCGACTTTGTCGACGATCAGATCGCCATGAACCGGGCCAAG
CTGGACAGAATCCACTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:2415451..2416768-

>CAN33_53790-T1 ID=CAN33_53790-T1|Name=CAN33_53790-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2520bp|location=Sequence derived from alignment at NKJJ01000020.1:2415451..2416768- (Aspergillus niger FDAARGOS_311)
AGCGACTTTGTCGACGATCAGATCGCCATGAACCGGGCCAAGCTGGACAG
AATCCACTAGATGGGCCGATTCGGTTTCAAAAAGTCCGGGGACGATGACG
AGGATTCCGGCAATCGTCTGGCACTTTTCGGCTCCAGATCGAAGAGCAAG
AGCCCTGCGCCGCCTGCCAACCCCTACGCTAAACCTATCCCGACCGACCC
TTACACCAAGGCCAAGATGCAGGCGGGTGTGGCTCCTCTGCCAGCCGGAG
AACAACCGCCCGCAGCTGGCCCCTCTGGTGCCCATAACATCCCCGGAGAT
AACAAGTATCAAGGGTATGCGCCGAATCGATATGGAAACCAAGGCGGCTA
TGGATCCGACCGCTTTGGTGGCGGGGGTCCTGCTGCCCCTGCCGCTTCCC
GGTACGGCCCTGGCGGCTATGGAGGATTAGGTAGCGCCGATCCCAATGAC
CCCGCGGCGGCAGATGGCAACAGAGATGCGCTTTTTGGAGGGGCTCGGGA
TCGGGCACAGCAACAACAGCAGGCCGGCCCTCCCCCGCCTTACTCCGAGG
GCGGAGCTGCGTATGGCGGAGGCAGCAACGAGTACAACACTTCCACATAC
CAGGAGCGCCACCTTACTGCTGAGGAGGAAGAGGAGGAAGAAATTCAGAC
CATCAAGCAGGATATCCGTTTCATCAAACAGGGCGACGTCGCCTCAACTC
GCAATGCACTCCGTGTGGCTGCCCAGGCCGAAGAGACGGGTCGAGAGACA
CTTGCTCGTTTGGGTGCTCAGGGAGAGCGTATCCATGATGCCGAGAAGAG
TTTGGATGTTGCTACAGTCGAGGGACGGATCGCGGAGGAGAAGGCTAAGG
AGTTGAAGACACTCAACAAGAGTATGTTCGCTGTGCACGTGTCCAATCCT
TTCACCAGTTCCCGGCGCCGGCGAGAGCGTGATGAGCGAATCTTGAACAC
CCACCGAGCAGAGCGGGAAACTCGCGAGGGTACCGAGAAGGAGGCTTTCA
AGACCAACCAGCGGATGGAGCGCACGTTCAGAGACATCGACAAGGAGGCG
GCCAAGCAGACCACGCGCAACAGGACCAACATTACCGATCGTGCCAAGTA
CCAATTCGAGGCGGACAGCGAGGATGAGGCGATGGAGAACGAGATCGAAC
AGAATTTGGACCTGCTTGGAGGAGCTGCGAGCCGCCTGAATGGACTTGCT
CGGGCGACAGGTCGCGAGCTGGACGAACAGAACCGTCATTTGGAGCGTAT
CACGGCCAAGAGCGACTTTGTCGACGATCAGATCGCCATGAACCGGGCCA
AGCTGGACAGAATCCACTAGATGGGCCGATTCGGTTTCAAAAAGTCCGGG
GACGATGACGAGGATTCCGGCAATCGTCTGGCACTTTTCGGCTCCAGATC
GAAGAGCAAGAGCCCTGCGCCGCCTGCCAACCCCTACGCTAAACCTATCC
CGACCGACCCTTACACCAAGGCCAAGATGCAGGCGGGTGTGGCTCCTCTG
CCAGCCGGAGAACAACCGCCCGCAGCTGGCCCCTCTGGTGCCCATAACAT
CCCCGGAGATAACAAGTATCAAGGGTATGCGCCGAATCGATATGGAAACC
AAGGCGGCTATGGATCCGACCGCTTTGGTGGCGGGGGTCCTGCTGCCCCT
GCCGCTTCCCGGTACGGCCCTGGCGGCTATGGAGGATTAGGTAGCGCCGA
TCCCAATGACCCCGCGGCGGCAGATGGCAACAGAGATGCGCTTTTTGGAG
GGGCTCGGGATCGGGCACAGCAACAACAGCAGGCCGGCCCTCCCCCGCCT
TACTCCGAGGGCGGAGCTGCGTATGGCGGAGGCAGCAACGAGTACAACAC
TTCCACATACCAGGAGCGCCACCTTACTGCTGAGGAGGAAGAGGAGGAAG
AAATTCAGACCATCAAGCAGGATATCCGTTTCATCAAACAGGGCGACGTC
GCCTCAACTCGCAATGCACTCCGTGTGGCTGCCCAGGCCGAAGAGACGGG
TCGAGAGACACTTGCTCGTTTGGGTGCTCAGGGAGAGCGTATCCATGATG
CCGAGAAGAGTTTGGATGTTGCTACAGTCGAGGGACGGATCGCGGAGGAG
AAGGCTAAGGAGTTGAAGACACTCAACAAGAGTATGTTCGCTGTGCACGT
GTCCAATCCTTTCACCAGTTCCCGGCGCCGGCGAGAGCGTGATGAGCGAA
TCTTGAACACCCACCGAGCAGAGCGGGAAACTCGCGAGGGTACCGAGAAG
GAGGCTTTCAAGACCAACCAGCGGATGGAGCGCACGTTCAGAGACATCGA
CAAGGAGGCGGCCAAGCAGACCACGCGCAACAGGACCAACATTACCGATC
GTGCCAAGTACCAATTCGAGGCGGACAGCGAGGATGAGGCGATGGAGAAC
GAGATCGAACAGAATTTGGACCTGCTTGGAGGAGCTGCGAGCCGCCTGAA
TGGACTTGCTCGGGCGACAGGTCGCGAGCTGGACGAACAGAACCGTCATT
TGGAGCGTATCACGGCCAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_53790CAN33_53790Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53790-T1CAN33_53790-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53790-T1.cdsCAN33_53790-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53790-T1.exon2CAN33_53790-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53790-T1.exon1CAN33_53790-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR000727
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2415451..2416768 -
Powered by Drupal