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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2461403..2462313- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_53860-T1 ID=CAN33_53860-T1|Name=CAN33_53860-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=911bp|location=Sequence derived from alignment at NKJJ01000020.1:2461403..2462313- (Aspergillus niger FDAARGOS_311)
ATGGCATTTATAACATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCCA
ATTCGACAACGCCTTCCAATTTATAAAATCCCTCGCCGGCAACCATACCG
ACATTCCAAAGACAACCGAGACAATACTAGAAAGCCAGATTGGCTGGTCC
AATCCTCCAGACCCGTCCAACATGCCATTCAATATCGATTTTCAGATGAT
TTTCTCGTTGTTCTACTTCCTCATCATCTTCCTTATACCTGTCTTCCTCA
CCAACTATCTCCTCCCTGCCACGAGCCACCCCAGACGCGATCGCTTCCTG
TTCGGATGGCACCTATTCGATGCCCTCGTCCACTTCGGCATGGAAGGGCT
CTTCCTCTTCCACTGCTTCTTCAGCTACGCCCCTATCTCCCCAGCGAGAG
CCGCGACCCCGTCTTCCTCGGCGACAAAGACCACGTTTACGGCGCCACAT
ACTCCAACTCACCAACCGCCAAACTGTGGCATGAGTACGCTCAAGCAGAC
CACCGCTGGGGTGGTGCCGACCCCACCATCATCTCCATCGAGCTGATCAC
TGTGATCTTCGGCGGTATCACCGCCTCCTTGATCAGCTATTGGGTCTACC
AGGCGTCCTGCCGGCAGCCGAGGGAGAAGGAAGCGATCAAGGGAAAGATG
TGGTTCATGATGATTGTGCTAGCGACGGCTGAGATATACGGAGGCTTCAT
GACCTTCCTGCCGGAGATGCTGACTGGTAATACGGCGTTGGCCACTGATA
GTTTCCTGTATTTCGTGCTGTATATTGTTATCTTCAACGGCCTCTGGGTC
GTTGTCCCTGGCTGGATTCTGTGGGAGGCGTGGAAGGAGTTCACGGGCTC
CTTCAATGTCATTAAGAAACAGCGGGACAACAGCTCCCCCAGGCACAAGC
TTGGAAGGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2461403..2462313- >CAN33_53860-T1 ID=CAN33_53860-T1|Name=CAN33_53860-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1728bp|location=Sequence derived from alignment at NKJJ01000020.1:2461403..2462313- (Aspergillus niger FDAARGOS_311)
CTACGCCCCTATCTCCCCAGCGAGAGCCGCGACCCCGTCTTCCTCGGCGA
CAAAGACCACGTTTACGGCGCCACATACTCCAACTCACCAACCGCCAAAC
TGTGGCATGAGTACGCTCAAGCAGACCACCGCTGGGGTGGTGCCGACCCC
ACCATCATCTCCATCGAGCTGATCACTGTGATCTTCGGCGGTATCACCGC
CTCCTTGATCAGCTATTGGGTCTACCAGGCGTCCTGCCGGCAGCCGAGGG
AGAAGGAAGCGATCAAGGGAAAGATGTGGTTCATGATGATTGTGCTAGCG
ACGGCTGAGATATACGGAGGCTTCATGACCTTCCTGCCGGAGATGCTGAC
TGGTAATACGGCGTTGGCCACTGATAGTTTCCTGTATTTCGTGCTGTATA
TTGTTATCTTCAACGGCCTCTGGGTCGTTGTCCCTGGCTGGATTCTGTGG
GAGGCGTGGAAGGAGTTCACGGGCTCCTTCAATGTCATTAAGAAACAGCG
GGACAACAGCTCCCCCAGGCACAAGCTTGGAAGGTGAATGGCATTTATAA
CATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCCAATTCGACAACGCC
TTCCAATTTATAAAATCCCTCGCCGGCAACCATACCGACATTCCAAAGAC
AACCGAGACAATACTAGAAAGCCAGATTGGCTGGTCCAATCCTCCAGACC
CGTCCAACATGCCATTCAATATCGATTTTCAGATGATTTTCTCGTTGTTC
TACTTCCTCATCATCTTCCTTATACCTGTCTTCCTCACCAACTATCTCCT
CCCTGCCACGAGCCACCCCAGACGCGATCGCTTCCTGTTCGGATGGCACC
TATTCGATGCCCTCCTACGCCCCTATCTCCCCAGCGAGAGCCGCGACCCC
GTCTTCCTCGGCGACAAAGACCACGTTTACGGCGCCACATACTCCAACTC
ACCAACCGCCAAACTGTGGCATGAGTACGCTCAAGCAGACCACCGCTGGG
GTGGTGCCGACCCCACCATCATCTCCATCGAGCTGATCACTGTGATCTTC
GGCGGTATCACCGCCTCCTTGATCAGCTATTGGGTCTACCAGGCGTCCTG
CCGGCAGCCGAGGGAGAAGGAAGCGATCAAGGGAAAGATGTGGTTCATGA
TGATTGTGCTAGCGACGGCTGAGATATACGGAGGCTTCATGACCTTCCTG
CCGGAGATGCTGACTGGTAATACGGCGTTGGCCACTGATAGTTTCCTGTA
TTTCGTGCTGTATATTGTTATCTTCAACGGCCTCTGGGTCGTTGTCCCTG
GCTGGATTCTGTGGGAGGCGTGGAAGGAGTTCACGGGCTCCTTCAATGTC
ATTAAGAAACAGCGGGACAACAGCTCCCCCAGGCACAAGCTTGGAAGGTG
AATGGCATTTATAACATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCC
AATTCGACAACGCCTTCCAATTTATAAAATCCCTCGCCGGCAACCATACC
GACATTCCAAAGACAACCGAGACAATACTAGAAAGCCAGATTGGCTGGTC
CAATCCTCCAGACCCGTCCAACATGCCATTCAATATCGATTTTCAGATGA
TTTTCTCGTTGTTCTACTTCCTCATCATCTTCCTTATACCTGTCTTCCTC
ACCAACTATCTCCTCCCTGCCACGAGCCACCCCAGACGCGATCGCTTCCT
GTTCGGATGGCACCTATTCGATGCCCTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0047750 | cholestenol delta-isomerase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016125 | sterol metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000201.6 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR033118 |
| DBxref | InterPro:IPR007905 |
| DBxref | PFAM:PF05241 |
| Product | Emopamil binding protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2461403..2462313 - |
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