You are here

Home

CAN33_53895-T1, CAN33_53895-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53895-T1
Unique NameCAN33_53895-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2484497..2485067-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53895-T1 ID=CAN33_53895-T1|Name=CAN33_53895-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=571bp|location=Sequence derived from alignment at NKJJ01000020.1:2484497..2485067- (Aspergillus niger FDAARGOS_311)
ATGGTTCAAGGAAACGGAAGGACCGATGGCGGAAGCTCCAGTCGTGAATT
TGGCATGAACTTTGAGGTTGCGCCTCCTACAACCGTTCCCCTTGGCGTAC
CAGTGACGCTACCAGTGGTCGTGGGCGTCCGACCTGTGGGTAACCCACGA
GGAGTGCAACAATTGGTTGCGCATGCCTCGCTGAGGAATGAAGCAGGCAC
TGCACCTGCTTCAGGACTCACAGGCGTGCTTACGTCTAGCGTGCGCAGTC
GCAATGGCAACGGCACCAGCGGATACGCTCGATTTGGGCCTCTCAAATTC
ACACAGCCTGGTCGGTATCGGATACGGGTTATGCTGGGAGCAGCCTCTTT
CAACGGCGTGACCACGAAAGAGTATGTTGATTCGGGTATCATTCAAGTAC
AGGCTGGCGCTGCCACACCACGTCCAAGTAAGTGTCATCGTTACTGTATG
GAGGGAATATCTCATAGCTAACACTGTTCTAGCACCCACTCAGGTCTCCA
AACTTCAGAGTCTAATCCCGGAAAACATTGACATCACTGCAGCTGACATC
GCAACATGGCAATCAGCCTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:2484497..2485067-

>CAN33_53895-T1 ID=CAN33_53895-T1|Name=CAN33_53895-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1032bp|location=Sequence derived from alignment at NKJJ01000020.1:2484497..2485067- (Aspergillus niger FDAARGOS_311)
CACCCACTCAGGTCTCCAAACTTCAGAGTCTAATCCCGGAAAACATTGAC
ATCACTGCAGCTGACATCGCAACATGGCAATCAGCCTAGATGGTTCAAGG
AAACGGAAGGACCGATGGCGGAAGCTCCAGTCGTGAATTTGGCATGAACT
TTGAGGTTGCGCCTCCTACAACCGTTCCCCTTGGCGTACCAGTGACGCTA
CCAGTGGTCGTGGGCGTCCGACCTGTGGGTAACCCACGAGGAGTGCAACA
ATTGGTTGCGCATGCCTCGCTGAGGAATGAAGCAGGCACTGCACCTGCTT
CAGGACTCACAGGCGTGCTTACGTCTAGCGTGCGCAGTCGCAATGGCAAC
GGCACCAGCGGATACGCTCGATTTGGGCCTCTCAAATTCACACAGCCTGG
TCGGTATCGGATACGGGTTATGCTGGGAGCAGCCTCTTTCAACGGCGTGA
CCACGAAAGAGTATGTTGATTCGGGTATCATTCAAGTACAGGCTGGCGCT
GCCACACCACGTCCAACACCCACTCAGGTCTCCAAACTTCAGAGTCTAAT
CCCGGAAAACATTGACATCACTGCAGCTGACATCGCAACATGGCAATCAG
CCTAGATGGTTCAAGGAAACGGAAGGACCGATGGCGGAAGCTCCAGTCGT
GAATTTGGCATGAACTTTGAGGTTGCGCCTCCTACAACCGTTCCCCTTGG
CGTACCAGTGACGCTACCAGTGGTCGTGGGCGTCCGACCTGTGGGTAACC
CACGAGGAGTGCAACAATTGGTTGCGCATGCCTCGCTGAGGAATGAAGCA
GGCACTGCACCTGCTTCAGGACTCACAGGCGTGCTTACGTCTAGCGTGCG
CAGTCGCAATGGCAACGGCACCAGCGGATACGCTCGATTTGGGCCTCTCA
AATTCACACAGCCTGGTCGGTATCGGATACGGGTTATGCTGGGAGCAGCC
TCTTTCAACGGCGTGACCACGAAAGAGTATGTTGATTCGGGTATCATTCA
AGTACAGGCTGGCGCTGCCACACCACGTCCAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_53895CAN33_53895Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53895-T1CAN33_53895-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53895-T1.cdsCAN33_53895-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53895-T1.exon2CAN33_53895-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53895-T1.exon1CAN33_53895-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000201.6
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2484497..2485067 -
Powered by Drupal