You are here

Home

CAN33_53900-T1, CAN33_53900-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53900-T1
Unique NameCAN33_53900-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2493797..2494355-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53900-T1 ID=CAN33_53900-T1|Name=CAN33_53900-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=559bp|location=Sequence derived from alignment at NKJJ01000020.1:2493797..2494355- (Aspergillus niger FDAARGOS_311)
ATGATGTTCAAGCCCTCGTCGCCCCTCTTCTCGGGTCTTCTTTGGTAGGT
CGCAACCCCATCTGACTGCCCCCTGTCACCCGCCCGGACATCCCGCATTG
CTATTCCACCCTCATCATCGTCATGCACCGTGAAGCTAATATCACTCGTC
AATCAAATAGGAAGATCCCGTGGCGTCTCTCCCAACCTCAGAAGGCTCGT
CAGAGGAAGCGCCTCCGTGGTGTTGACCGGGTTGTCGACACTGTCTCCGC
CGCGCTGGAGCGCAATGGATACACCACCAAGGCCGTCGAGCGCTGGTACA
GGGAAATGCCTCGCGAGGAGGAGATGCTGCCCAAGGACAAGTACACACTG
TTCGACAAGAAGGAGAAGAAGTACCGCAAGGGCATTCACAGTACGTTATA
CTCCTGGACTTTTCTGCGTCGTCGATGGACCGCCTTTCCCAATCGAGGAT
CTCAAACAAAGGGTATTCTTTTCAAATTTCGTGTGCTAATGCTATGTCTC
TTCCAGAGCTACCCAAGTGGACCCGTGTCAGCCAGAGAGTGAACCCTCCG
GGTTTCTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:2493797..2494355-

>CAN33_53900-T1 ID=CAN33_53900-T1|Name=CAN33_53900-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=981bp|location=Sequence derived from alignment at NKJJ01000020.1:2493797..2494355- (Aspergillus niger FDAARGOS_311)
AGCTACCCAAGTGGACCCGTGTCAGCCAGAGAGTGAACCCTCCGGGTTTC
TAAGAAGATCCCGTGGCGTCTCTCCCAACCTCAGAAGGCTCGTCAGAGGA
AGCGCCTCCGTGGTGTTGACCGGGTTGTCGACACTGTCTCCGCCGCGCTG
GAGCGCAATGGATACACCACCAAGGCCGTCGAGCGCTGGTACAGGGAAAT
GCCTCGCGAGGAGGAGATGCTGCCCAAGGACAAGTACACACTGTTCGACA
AGAAGGAGAAGAAGTACCGCAAGGGCATTCACAATGATGTTCAAGCCCTC
GTCGCCCCTCTTCTCGGGTCTTCTTTGAGCTACCCAAGTGGACCCGTGTC
AGCCAGAGAGTGAACCCTCCGGGTTTCTAAGAAGATCCCGTGGCGTCTCT
CCCAACCTCAGAAGGCTCGTCAGAGGAAGCGCCTCCGTGGTGTTGACCGG
GTTGTCGACACTGTCTCCGCCGCGCTGGAGCGCAATGGATACACCACCAA
GGCCGTCGAGCGCTGGTACAGGGAAATGCCTCGCGAGGAGGAGATGCTGC
CCAAGGACAAGTACACACTGTTCGACAAGAAGGAGAAGAAGTACCGCAAG
GGCATTCACAATGATGTTCAAGCCCTCGTCGCCCCTCTTCTCGGGTCTTC
TTTGAGCTACCCAAGTGGACCCGTGTCAGCCAGAGAGTGAACCCTCCGGG
TTTCTAAGAAGATCCCGTGGCGTCTCTCCCAACCTCAGAAGGCTCGTCAG
AGGAAGCGCCTCCGTGGTGTTGACCGGGTTGTCGACACTGTCTCCGCCGC
GCTGGAGCGCAATGGATACACCACCAAGGCCGTCGAGCGCTGGTACAGGG
AAATGCCTCGCGAGGAGGAGATGCTGCCCAAGGACAAGTACACACTGTTC
GACAAGAAGGAGAAGAAGTACCGCAAGGGCATTCACAATGATGTTCAAGC
CCTCGTCGCCCCTCTTCTCGGGTCTTCTTTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_53900CAN33_53900Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53900-T1CAN33_53900-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53900-T1.cdsCAN33_53900-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53900-T1.exon3CAN33_53900-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_53900-T1.exon2CAN33_53900-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53900-T1.exon1CAN33_53900-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000201.6
NoteEggNog:ENOG41
DBxrefInterPro:IPR016340
DBxrefPFAM:PF09784
ProductMitochondrial ribosomal protein L31 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2493797..2494355 -
Powered by Drupal