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CAN33_53915-T1, CAN33_53915-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_53915-T1
Unique NameCAN33_53915-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2498669..2499943-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_53915-T1 ID=CAN33_53915-T1|Name=CAN33_53915-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1275bp|location=Sequence derived from alignment at NKJJ01000020.1:2498669..2499943- (Aspergillus niger FDAARGOS_311)
ATGAGTGCTACGCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTCTG
TCGCAGCCCTGTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGCCG
GTGTTAGCCAGTTTGTCGTCAAGTAAGCCTCACATGTACACGGCGAAGGA
TTTGCAAGCCTCATACTAACTGTTTCGCTCATCAGATGCGCAGAGGATGA
GAAATTCCTCCTGACATATGTTATTTTCAAGCTTCAGCTCATCAAGGGCA
AAGTCATCATATTCGTCGGAGACATCGACCGTTGCTATCGCCTCAAGCTT
TTCCTGGAACAATTCGGCGTCAAGAGCTGTGTGCTCAACTCTGAGTTGCC
AGTGAACTCCCGAATCCACGTCGTCCAGGAGTTCAACAAGGGTGTTTACG
ACATCATCATTGCTGCAGATGACCAAGAAGTCCTCGGATCTAAGTCTAAG
AAGGCCAAGAATGCCGGTGCCGATGAGGAGGAGGAAGCTGCTGGTGTCAT
GGGCTCGAGTGATGACGAAGAGGCTGAAGACGACAAGAAGTCGAATCGTC
CCGATAAGCGCCGCAAGCTTACCGCGAAAGAAAAGGACTATGGTATCTCT
CGTGGTATCGACTTCCAGAACGTGGCCTGCGTCTTGAACTTTGACCTCCC
CACAACCGCCAAATCCTACACACACCGCATTGGACGAACCGGCCGTGGCG
GCAAGACCGGCATGGCGCTCTCGTTCGTCGTCCCGGCAGACCAGTACGGA
AAGCACAAACCCACTTCCTTCCCCACCGCCAAACATGATGAAGCCGTCCT
GGCCAAGATCGTCAAACGACAATCCAAACATGGCCACGAAGTCAAGCCCT
ACCACTTTGAGATGAGTCAAGTCGACGCCTTCCGCTACCGTATGACCGAC
GGTCTTCGCGCCATCACCCGACTTGCCGTTCAGGAAGCCCGTGCTCGTGA
GATCCGTCAGGAGCTGGTCAAGAGCGAGAAACTGAAGCGCCACTTCGAAG
ACAACCCCGATGAGCTGCGCCAGCTCCGTCACGATGGCGAGTTGCGCTCC
GCACGTATCCAACCCCACCTCAAACACATCCCCGAATACCTGATGCCGTC
CAAGGGTCGCAAGGGCATTTCCAGTGAGGACGTCGGCTTCGTTGGGTTCC
GGAAATCCAGCGACAACCGTATCCGCAAGGCTAGAGATAAGAACCGCGCC
AAGGGCAAGGGCCGCAAGCCGTCAGGTGTTAGAAAGGTTGATCCGTTGAA
GACGTTCAATCGGGGTCGGAAATAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2498669..2499943-

>CAN33_53915-T1 ID=CAN33_53915-T1|Name=CAN33_53915-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2424bp|location=Sequence derived from alignment at NKJJ01000020.1:2498669..2499943- (Aspergillus niger FDAARGOS_311)
ATGCGCAGAGGATGAGAAATTCCTCCTGACATATGTTATTTTCAAGCTTC
AGCTCATCAAGGGCAAAGTCATCATATTCGTCGGAGACATCGACCGTTGC
TATCGCCTCAAGCTTTTCCTGGAACAATTCGGCGTCAAGAGCTGTGTGCT
CAACTCTGAGTTGCCAGTGAACTCCCGAATCCACGTCGTCCAGGAGTTCA
ACAAGGGTGTTTACGACATCATCATTGCTGCAGATGACCAAGAAGTCCTC
GGATCTAAGTCTAAGAAGGCCAAGAATGCCGGTGCCGATGAGGAGGAGGA
AGCTGCTGGTGTCATGGGCTCGAGTGATGACGAAGAGGCTGAAGACGACA
AGAAGTCGAATCGTCCCGATAAGCGCCGCAAGCTTACCGCGAAAGAAAAG
GACTATGGTATCTCTCGTGGTATCGACTTCCAGAACGTGGCCTGCGTCTT
GAACTTTGACCTCCCCACAACCGCCAAATCCTACACACACCGCATTGGAC
GAACCGGCCGTGGCGGCAAGACCGGCATGGCGCTCTCGTTCGTCGTCCCG
GCAGACCAGTACGGAAAGCACAAACCCACTTCCTTCCCCACCGCCAAACA
TGATGAAGCCGTCCTGGCCAAGATCGTCAAACGACAATCCAAACATGGCC
ACGAAGTCAAGCCCTACCACTTTGAGATGAGTCAAGTCGACGCCTTCCGC
TACCGTATGACCGACGGTCTTCGCGCCATCACCCGACTTGCCGTTCAGGA
AGCCCGTGCTCGTGAGATCCGTCAGGAGCTGGTCAAGAGCGAGAAACTGA
AGCGCCACTTCGAAGACAACCCCGATGAGCTGCGCCAGCTCCGTCACGAT
GGCGAGTTGCGCTCCGCACGTATCCAACCCCACCTCAAACACATCCCCGA
ATACCTGATGCCGTCCAAGGGTCGCAAGGGCATTTCCAGTGAGGACGTCG
GCTTCGTTGGGTTCCGGAAATCCAGCGACAACCGTATCCGCAAGGCTAGA
GATAAGAACCGCGCCAAGGGCAAGGGCCGCAAGCCGTCAGGTGTTAGAAA
GGTTGATCCGTTGAAGACGTTCAATCGGGGTCGGAAATAGATGAGTGCTA
CGCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTCTGTCGCAGCCCT
GTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGCCGGTGTTAGCCA
GTTTGTCGTCAAATGCGCAGAGGATGAGAAATTCCTCCTGACATATGTTA
TTTTCAAGCTTCAGCTCATCAAGGGCAAAGTCATCATATTCGTCGGAGAC
ATCGACCGTTGCTATCGCCTCAAGCTTTTCCTGGAACAATTCGGCGTCAA
GAGCTGTGTGCTCAACTCTGAGTTGCCAGTGAACTCCCGAATCCACGTCG
TCCAGGAGTTCAACAAGGGTGTTTACGACATCATCATTGCTGCAGATGAC
CAAGAAGTCCTCGGATCTAAGTCTAAGAAGGCCAAGAATGCCGGTGCCGA
TGAGGAGGAGGAAGCTGCTGGTGTCATGGGCTCGAGTGATGACGAAGAGG
CTGAAGACGACAAGAAGTCGAATCGTCCCGATAAGCGCCGCAAGCTTACC
GCGAAAGAAAAGGACTATGGTATCTCTCGTGGTATCGACTTCCAGAACGT
GGCCTGCGTCTTGAACTTTGACCTCCCCACAACCGCCAAATCCTACACAC
ACCGCATTGGACGAACCGGCCGTGGCGGCAAGACCGGCATGGCGCTCTCG
TTCGTCGTCCCGGCAGACCAGTACGGAAAGCACAAACCCACTTCCTTCCC
CACCGCCAAACATGATGAAGCCGTCCTGGCCAAGATCGTCAAACGACAAT
CCAAACATGGCCACGAAGTCAAGCCCTACCACTTTGAGATGAGTCAAGTC
GACGCCTTCCGCTACCGTATGACCGACGGTCTTCGCGCCATCACCCGACT
TGCCGTTCAGGAAGCCCGTGCTCGTGAGATCCGTCAGGAGCTGGTCAAGA
GCGAGAAACTGAAGCGCCACTTCGAAGACAACCCCGATGAGCTGCGCCAG
CTCCGTCACGATGGCGAGTTGCGCTCCGCACGTATCCAACCCCACCTCAA
ACACATCCCCGAATACCTGATGCCGTCCAAGGGTCGCAAGGGCATTTCCA
GTGAGGACGTCGGCTTCGTTGGGTTCCGGAAATCCAGCGACAACCGTATC
CGCAAGGCTAGAGATAAGAACCGCGCCAAGGGCAAGGGCCGCAAGCCGTC
AGGTGTTAGAAAGGTTGATCCGTTGAAGACGTTCAATCGGGGTCGGAAAT
AGATGAGTGCTACGCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTC
TGTCGCAGCCCTGTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGC
CGGTGTTAGCCAGTTTGTCGTCAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP9_1CAN33_53915Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53915-T1CAN33_53915-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53915-T1.cdsCAN33_53915-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_53915-T1.exon2CAN33_53915-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_53915-T1.exon1CAN33_53915-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000201.6
NoteSMCOG1122:ATP-dependent RNA helicase
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001650
DBxrefPFAM:PF00271
ProductATP-dependent DNA/RNA helicase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2498669..2499943 -
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