|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2500090..2500697- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_53920-T1 ID=CAN33_53920-T1|Name=CAN33_53920-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=608bp|location=Sequence derived from alignment at NKJJ01000020.1:2500090..2500697- (Aspergillus niger FDAARGOS_311)
ATGAAGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCGGA
GACTAAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAACC
TGGATCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGCCT
ACGCCCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGATAT
CCTTGGTGCGTACATCCTGGTGCCTGTGGTGGATGATGAGTATACTAACA
ATACCAGCTCGTGCAAAGACCGGCTCCGGAAAGACCGCCGCATATGTCCT
CCCTATTCTTCAGACCATTCTTCAGAAGAAAGCTGTCAGTACTTTCCAGG
GAAGATGAATTAAAAAATTGAGACAAGCTAAATTGTATCATGCTTTAGGC
CGACCCCTCGTTGAAAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAG
AGCTTGCAGAACAGGTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGC
GGAAAGGATGTCCGCTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGT
ACAGCGGACTATGCTCTCTGACTACCCTGATATCGTCATCTCCACCCCGC
TCGTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2500090..2500697- >CAN33_53920-T1 ID=CAN33_53920-T1|Name=CAN33_53920-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1476bp|location=Sequence derived from alignment at NKJJ01000020.1:2500090..2500697- (Aspergillus niger FDAARGOS_311)
GCCGACCCCTCGTTGAAAGCCACCACTGGCCTCATCCTCGTCCCCACTCG
AGAGCTTGCAGAACAGGTCCAAAAAGTCGTCACCACATTCGCTGCTTTCT
GCGGAAAGGATGTCCGCTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCC
GTACAGCGGACTATGCTCTCTGACTACCCTGATATCGTCATCTCCACCCC
GCTCGTGTGACTCGTGCAAAGACCGGCTCCGGAAAGACCGCCGCATATGT
CCTCCCTATTCTTCAGACCATTCTTCAGAAGAAAGCTATGAAGCGCAAGT
TGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCGGAGACTAAGGAGACC
TCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAACCTGGATCCGCGACT
GCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGCCTACGCCCGTCCAGG
CCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGATATCCTTGGCCGACCC
CTCGTTGAAAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAGAGCTTG
CAGAACAGGTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGCGGAAAG
GATGTCCGCTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGTACAGCG
GACTATGCTCTCTGACTACCCTGATATCGTCATCTCCACCCCGCTCGTGT
GACTCGTGCAAAGACCGGCTCCGGAAAGACCGCCGCATATGTCCTCCCTA
TTCTTCAGACCATTCTTCAGAAGAAAGCTATGAAGCGCAAGTTGGATGCT
AACGATGTTCCCTCCCCCGAAGTTGCGGAGACTAAGGAGACCTCCGATGC
GGACGAGGCCGACTTTGAAAGCCTCAACCTGGATCCGCGACTGCGCCAAG
CCTTGATCAAAGAGAAGTTCACCAAGCCTACGCCCGTCCAGGCCAAGGCT
ATTCCTCTGGCGCTCGCAGGCAAAGATATCCTTGGCCGACCCCTCGTTGA
AAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAGAGCTTGCAGAACAG
GTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGCGGAAAGGATGTCCG
CTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGTACAGCGGACTATGC
TCTCTGACTACCCTGATATCGTCATCTCCACCCCGCTCGTGTGACTCGTG
CAAAGACCGGCTCCGGAAAGACCGCCGCATATGTCCTCCCTATTCTTCAG
ACCATTCTTCAGAAGAAAGCTATGAAGCGCAAGTTGGATGCTAACGATGT
TCCCTCCCCCGAAGTTGCGGAGACTAAGGAGACCTCCGATGCGGACGAGG
CCGACTTTGAAAGCCTCAACCTGGATCCGCGACTGCGCCAAGCCTTGATC
AAAGAGAAGTTCACCAAGCCTACGCCCGTCCAGGCCAAGGCTATTCCTCT
GGCGCTCGCAGGCAAAGATATCCTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000201.6 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR011545 |
| DBxref | PFAM:PF00270 |
| Product | ATP-dependent DNA/RNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2500090..2500697 - |
|
