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CAN33_5400-T1, CAN33_5400-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5400-T1
Unique NameCAN33_5400-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1001220..1003387-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5400-T1 ID=CAN33_5400-T1|Name=CAN33_5400-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2168bp|location=Sequence derived from alignment at NKJJ01000019.1:1001220..1003387- (Aspergillus niger FDAARGOS_311)
ATGGGTACCTTCAAGAAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGAC
TGGAGATGGCATGGGGAACGTCCGGGTAAAGGGTGAAAACTTTTACAGGT
TAGTACACCCGTTGCGACAGATGGTCCTGGATATGTGTGCTGACTTGTTC
AAGAGATGCGAAGAAGTTGAGGACCTTGAATATGCTCAAGGATGGTAAAC
CCCAACGTAACGCTGAAGGAAAGATCACCAAGGCTGCTTCGTACCAGTCT
CGAGACGCCCCCGTCGCTAGGATTGAACCCAACCGTAAATGGTTTGGAAA
CACCAGAGTGATCTCGCAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCG
CTGAGCGTGCTTCTGATCCGTATTCAGTCTTGCTCAAGACCAACAAACTT
CCCATGAGCCTGATCAGAGATGACAAGGGTGTAAATGGATTGAAGCAGCA
CCAGGCCAAGATGGCCATCGAGACGAATCCCTTCAGTGACACCTTCGGGC
CCAAGGCTCAGAGGAAACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGAT
CTGGCTGGCGAGTCCGCCAAGATGCACGACGCCTATGTTGAGAAGTCGGA
CCATGCTACTCATGAAGATGGTACTATGGTGGTGAACGGTGATGACGTCG
CAGTAGAGGAGGACTCTAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTC
CTTAAGGGACAGAGTAAGCGTATTTGGAACGAACTTTACAAGGTCATTGA
TTCCTCCGATGTTGTCATCCATCTCCTTGATGCTCGTGATCCGGAAGGTA
CACGGTGCAGGAGTATCGAAAAATACATCCGGGAGGAGGCTCCTCACAAG
CACTTGATTTTCGTCTTGAACAAGTGTGATCTTGTGCCTACAGGCGTGGC
GGTAAGTCTCTATTCGCTTTCTTTTCTCCTTGCAACCACCCCCTATTCCT
TTGATATACAACACGGCTTTTCGCCGATGCCATCGCTAAGTCAAGGCTAC
TCCTGCGACTTCATGTCGTGTTATTCACTATGGGAGACTGTCTGTTACAG
CTTTGGCAGATTGACGCTGGTCCGCGCCGACCTTCTTTCTGAAGCTAGGC
TGATTGGTTTTCGTTTTGAAAGCCAATCGTTAAGGACCGAGCTGTGTTCT
GTTTTTGAGTTGAGTCCTGCTTCCGCTCTTGAAGTGGCATCATAGCAGGT
CTCTTAGTAACATTTCACACATCCTGTCATCATACTTCTGTTTCTTTCTT
TTTTTAATTTTTTTTCTCTTATTCTTTGACTATGCTATACTTTGATAGCA
ACGCTGGTGTTCAGCTGCTAACGTGACACCAGGCTGCTTGGGTTCGCCAC
CTTTCTAAGGATTATCCTACCTTGGCTTTCCATGCTTCTATCAACAATTC
CTTCGGGAAAGGCTCGTTGATCCAGCTACTGAGACAATTTTCTTCTTTGC
ACTCGGACCGGAAGCAGATTTCCGTGGGATTCATTGGATACCCCAACACT
GGAAAGTCTTCCGTCATCAACACCTTGCGCAAGAAGAAGGTGTGCACTGT
GGCTCCTATCCCGGGTGAAACCAAGGTGTGGCAGTACGTTACCTTGATGA
AGAGGATCTACCTCATTGATTGCCCTGGTGTGGTTCCTCCGAACCCGAAC
GACTCTCCAGAGGATATTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACGT
AGAGAACCCTGAGCAGTACATCCCAGCTATTCTCAAGCGTGTTCAGCCTA
AGCATTTGGAGCGTACCTACGGTATCAAGAGCACTGAAGACCCCGTCGAG
TTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAGA
GCCTGATCTTGACGGTGTTGCCAAGATGGTCATTAACGACTTCCTTCGTG
GAAAGATCCCTTGGTTCACTGCCCCCCTCACAACAGTGGCGAGGAGGGCG
AGAAGATTGAAGGTCGTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGCGG
AAGCTTGATGAGACCGCTCCTGAGGCTGCTGATACCACAGAAGCGGCTGA
GAAGCAAGAGTCTGGCTCGGGAGATGAGTTCGAGGGCTTTGACGAGGAAG
ATGATGATGACGACTCGATCGCCAATCTTGAGGTCAGCGACGAGGAGAGC
GGAGCGGAGGAAGATTAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:1001220..1003387-

>CAN33_5400-T1 ID=CAN33_5400-T1|Name=CAN33_5400-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6636bp|location=Sequence derived from alignment at NKJJ01000019.1:1001220..1003387- (Aspergillus niger FDAARGOS_311)
TGGCGAGGAGGGCGAGAAGATTGAAGGTCGTGAAGGTCGCCTCGGCGAAA
TGAGCCGCAAGCGGAAGCTTGATGAGACCGCTCCTGAGGCTGCTGATACC
ACAGAAGCGGCTGAGAAGCAAGAGTCTGGCTCGGGAGATGAGTTCGAGGG
CTTTGACGAGGAAGATGATGATGACGACTCGATCGCCAATCTTGAGGTCA
GCGACGAGGAGAGCGGAGCGGAGGAAGATTAAGCTGCTTGGGTTCGCCAC
CTTTCTAAGGATTATCCTACCTTGGCTTTCCATGCTTCTATCAACAATTC
CTTCGGGAAAGGCTCGTTGATCCAGCTACTGAGACAATTTTCTTCTTTGC
ACTCGGACCGGAAGCAGATTTCCGTGGGATTCATTGGATACCCCAACACT
GGAAAGTCTTCCGTCATCAACACCTTGCGCAAGAAGAAGGTGTGCACTGT
GGCTCCTATCCCGGGTGAAACCAAGGTGTGGCAGTACGTTACCTTGATGA
AGAGGATCTACCTCATTGATTGCCCTGGTGTGGTTCCTCCGAACCCGAAC
GACTCTCCAGAGGATATTCTTCTCCGTGGTGTCGTCCGTGTGGAGAACGT
AGAGAACCCTGAGCAGTACATCCCAGCTATTCTCAAGCGTGTTCAGCCTA
AGCATTTGGAGCGTACCTACGGTATCAAGAGCACTGAAGACCCCGTCGAG
TTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCGACTCCTCCGTGGTGGAGA
GCCTGATCTTGACGGTGTTGCCAAGATGGTCATTAACGACTTCCTTCGTG
GAAAGATCCCTTGAGATGCGAAGAAGTTGAGGACCTTGAATATGCTCAAG
GATGGTAAACCCCAACGTAACGCTGAAGGAAAGATCACCAAGGCTGCTTC
GTACCAGTCTCGAGACGCCCCCGTCGCTAGGATTGAACCCAACCGTAAAT
GGTTTGGAAACACCAGAGTGATCTCGCAAGAGGCTCTGTCCTCTTTCCGT
GAGGCGGTCGCTGAGCGTGCTTCTGATCCGTATTCAGTCTTGCTCAAGAC
CAACAAACTTCCCATGAGCCTGATCAGAGATGACAAGGGTGTAAATGGAT
TGAAGCAGCACCAGGCCAAGATGGCCATCGAGACGAATCCCTTCAGTGAC
ACCTTCGGGCCCAAGGCTCAGAGGAAACGTGTCAAGTTGGGTGTTTCGTC
GCTTGCGGATCTGGCTGGCGAGTCCGCCAAGATGCACGACGCCTATGTTG
AGAAGTCGGACCATGCTACTCATGAAGATGGTACTATGGTGGTGAACGGT
GATGACGTCGCAGTAGAGGAGGACTCTAGTGTCGCGCCCATCGCAAAGGA
GGCTGTCTTCCTTAAGGGACAGAGTAAGCGTATTTGGAACGAACTTTACA
AGGTCATTGATTCCTCCGATGTTGTCATCCATCTCCTTGATGCTCGTGAT
CCGGAAGGTACACGGTGCAGGAGTATCGAAAAATACATCCGGGAGGAGGC
TCCTCACAAGCACTTGATTTTCGTCTTGAACAAGTGTGATCTTGTGCCTA
CAGGCGTGGCGATGGGTACCTTCAAGAAGGAAGCCTCTCGTAAAGAGCGG
CAGGGGAAGACTGGAGATGGCATGGGGAACGTCCGGGTAAAGGGTGAAAA
CTTTTACAGTGGCGAGGAGGGCGAGAAGATTGAAGGTCGTGAAGGTCGCC
TCGGCGAAATGAGCCGCAAGCGGAAGCTTGATGAGACCGCTCCTGAGGCT
GCTGATACCACAGAAGCGGCTGAGAAGCAAGAGTCTGGCTCGGGAGATGA
GTTCGAGGGCTTTGACGAGGAAGATGATGATGACGACTCGATCGCCAATC
TTGAGGTCAGCGACGAGGAGAGCGGAGCGGAGGAAGATTAAGCTGCTTGG
GTTCGCCACCTTTCTAAGGATTATCCTACCTTGGCTTTCCATGCTTCTAT
CAACAATTCCTTCGGGAAAGGCTCGTTGATCCAGCTACTGAGACAATTTT
CTTCTTTGCACTCGGACCGGAAGCAGATTTCCGTGGGATTCATTGGATAC
CCCAACACTGGAAAGTCTTCCGTCATCAACACCTTGCGCAAGAAGAAGGT
GTGCACTGTGGCTCCTATCCCGGGTGAAACCAAGGTGTGGCAGTACGTTA
CCTTGATGAAGAGGATCTACCTCATTGATTGCCCTGGTGTGGTTCCTCCG
AACCCGAACGACTCTCCAGAGGATATTCTTCTCCGTGGTGTCGTCCGTGT
GGAGAACGTAGAGAACCCTGAGCAGTACATCCCAGCTATTCTCAAGCGTG
TTCAGCCTAAGCATTTGGAGCGTACCTACGGTATCAAGAGCACTGAAGAC
CCCGTCGAGTTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCGACTCCTCCG
TGGTGGAGAGCCTGATCTTGACGGTGTTGCCAAGATGGTCATTAACGACT
TCCTTCGTGGAAAGATCCCTTGAGATGCGAAGAAGTTGAGGACCTTGAAT
ATGCTCAAGGATGGTAAACCCCAACGTAACGCTGAAGGAAAGATCACCAA
GGCTGCTTCGTACCAGTCTCGAGACGCCCCCGTCGCTAGGATTGAACCCA
ACCGTAAATGGTTTGGAAACACCAGAGTGATCTCGCAAGAGGCTCTGTCC
TCTTTCCGTGAGGCGGTCGCTGAGCGTGCTTCTGATCCGTATTCAGTCTT
GCTCAAGACCAACAAACTTCCCATGAGCCTGATCAGAGATGACAAGGGTG
TAAATGGATTGAAGCAGCACCAGGCCAAGATGGCCATCGAGACGAATCCC
TTCAGTGACACCTTCGGGCCCAAGGCTCAGAGGAAACGTGTCAAGTTGGG
TGTTTCGTCGCTTGCGGATCTGGCTGGCGAGTCCGCCAAGATGCACGACG
CCTATGTTGAGAAGTCGGACCATGCTACTCATGAAGATGGTACTATGGTG
GTGAACGGTGATGACGTCGCAGTAGAGGAGGACTCTAGTGTCGCGCCCAT
CGCAAAGGAGGCTGTCTTCCTTAAGGGACAGAGTAAGCGTATTTGGAACG
AACTTTACAAGGTCATTGATTCCTCCGATGTTGTCATCCATCTCCTTGAT
GCTCGTGATCCGGAAGGTACACGGTGCAGGAGTATCGAAAAATACATCCG
GGAGGAGGCTCCTCACAAGCACTTGATTTTCGTCTTGAACAAGTGTGATC
TTGTGCCTACAGGCGTGGCGATGGGTACCTTCAAGAAGGAAGCCTCTCGT
AAAGAGCGGCAGGGGAAGACTGGAGATGGCATGGGGAACGTCCGGGTAAA
GGGTGAAAACTTTTACAGTGGCGAGGAGGGCGAGAAGATTGAAGGTCGTG
AAGGTCGCCTCGGCGAAATGAGCCGCAAGCGGAAGCTTGATGAGACCGCT
CCTGAGGCTGCTGATACCACAGAAGCGGCTGAGAAGCAAGAGTCTGGCTC
GGGAGATGAGTTCGAGGGCTTTGACGAGGAAGATGATGATGACGACTCGA
TCGCCAATCTTGAGGTCAGCGACGAGGAGAGCGGAGCGGAGGAAGATTAA
GCTGCTTGGGTTCGCCACCTTTCTAAGGATTATCCTACCTTGGCTTTCCA
TGCTTCTATCAACAATTCCTTCGGGAAAGGCTCGTTGATCCAGCTACTGA
GACAATTTTCTTCTTTGCACTCGGACCGGAAGCAGATTTCCGTGGGATTC
ATTGGATACCCCAACACTGGAAAGTCTTCCGTCATCAACACCTTGCGCAA
GAAGAAGGTGTGCACTGTGGCTCCTATCCCGGGTGAAACCAAGGTGTGGC
AGTACGTTACCTTGATGAAGAGGATCTACCTCATTGATTGCCCTGGTGTG
GTTCCTCCGAACCCGAACGACTCTCCAGAGGATATTCTTCTCCGTGGTGT
CGTCCGTGTGGAGAACGTAGAGAACCCTGAGCAGTACATCCCAGCTATTC
TCAAGCGTGTTCAGCCTAAGCATTTGGAGCGTACCTACGGTATCAAGAGC
ACTGAAGACCCCGTCGAGTTCCTCAGTCTCCTTGCCCGCAAGGGCGGTCG
ACTCCTCCGTGGTGGAGAGCCTGATCTTGACGGTGTTGCCAAGATGGTCA
TTAACGACTTCCTTCGTGGAAAGATCCCTTGAGATGCGAAGAAGTTGAGG
ACCTTGAATATGCTCAAGGATGGTAAACCCCAACGTAACGCTGAAGGAAA
GATCACCAAGGCTGCTTCGTACCAGTCTCGAGACGCCCCCGTCGCTAGGA
TTGAACCCAACCGTAAATGGTTTGGAAACACCAGAGTGATCTCGCAAGAG
GCTCTGTCCTCTTTCCGTGAGGCGGTCGCTGAGCGTGCTTCTGATCCGTA
TTCAGTCTTGCTCAAGACCAACAAACTTCCCATGAGCCTGATCAGAGATG
ACAAGGGTGTAAATGGATTGAAGCAGCACCAGGCCAAGATGGCCATCGAG
ACGAATCCCTTCAGTGACACCTTCGGGCCCAAGGCTCAGAGGAAACGTGT
CAAGTTGGGTGTTTCGTCGCTTGCGGATCTGGCTGGCGAGTCCGCCAAGA
TGCACGACGCCTATGTTGAGAAGTCGGACCATGCTACTCATGAAGATGGT
ACTATGGTGGTGAACGGTGATGACGTCGCAGTAGAGGAGGACTCTAGTGT
CGCGCCCATCGCAAAGGAGGCTGTCTTCCTTAAGGGACAGAGTAAGCGTA
TTTGGAACGAACTTTACAAGGTCATTGATTCCTCCGATGTTGTCATCCAT
CTCCTTGATGCTCGTGATCCGGAAGGTACACGGTGCAGGAGTATCGAAAA
ATACATCCGGGAGGAGGCTCCTCACAAGCACTTGATTTTCGTCTTGAACA
AGTGTGATCTTGTGCCTACAGGCGTGGCGATGGGTACCTTCAAGAAGGAA
GCCTCTCGTAAAGAGCGGCAGGGGAAGACTGGAGATGGCATGGGGAACGT
CCGGGTAAAGGGTGAAAACTTTTACAGTGGCGAGGAGGGCGAGAAGATTG
AAGGTCGTGAAGGTCGCCTCGGCGAAATGAGCCGCAAGCGGAAGCTTGAT
GAGACCGCTCCTGAGGCTGCTGATACCACAGAAGCGGCTGAGAAGCAAGA
GTCTGGCTCGGGAGATGAGTTCGAGGGCTTTGACGAGGAAGATGATGATG
ACGACTCGATCGCCAATCTTGAGGTCAGCGACGAGGAGAGCGGAGCGGAG
GAAGATTAAGCTGCTTGGGTTCGCCACCTTTCTAAGGATTATCCTACCTT
GGCTTTCCATGCTTCTATCAACAATTCCTTCGGGAAAGGCTCGTTGATCC
AGCTACTGAGACAATTTTCTTCTTTGCACTCGGACCGGAAGCAGATTTCC
GTGGGATTCATTGGATACCCCAACACTGGAAAGTCTTCCGTCATCAACAC
CTTGCGCAAGAAGAAGGTGTGCACTGTGGCTCCTATCCCGGGTGAAACCA
AGGTGTGGCAGTACGTTACCTTGATGAAGAGGATCTACCTCATTGATTGC
CCTGGTGTGGTTCCTCCGAACCCGAACGACTCTCCAGAGGATATTCTTCT
CCGTGGTGTCGTCCGTGTGGAGAACGTAGAGAACCCTGAGCAGTACATCC
CAGCTATTCTCAAGCGTGTTCAGCCTAAGCATTTGGAGCGTACCTACGGT
ATCAAGAGCACTGAAGACCCCGTCGAGTTCCTCAGTCTCCTTGCCCGCAA
GGGCGGTCGACTCCTCCGTGGTGGAGAGCCTGATCTTGACGGTGTTGCCA
AGATGGTCATTAACGACTTCCTTCGTGGAAAGATCCCTTGAGATGCGAAG
AAGTTGAGGACCTTGAATATGCTCAAGGATGGTAAACCCCAACGTAACGC
TGAAGGAAAGATCACCAAGGCTGCTTCGTACCAGTCTCGAGACGCCCCCG
TCGCTAGGATTGAACCCAACCGTAAATGGTTTGGAAACACCAGAGTGATC
TCGCAAGAGGCTCTGTCCTCTTTCCGTGAGGCGGTCGCTGAGCGTGCTTC
TGATCCGTATTCAGTCTTGCTCAAGACCAACAAACTTCCCATGAGCCTGA
TCAGAGATGACAAGGGTGTAAATGGATTGAAGCAGCACCAGGCCAAGATG
GCCATCGAGACGAATCCCTTCAGTGACACCTTCGGGCCCAAGGCTCAGAG
GAAACGTGTCAAGTTGGGTGTTTCGTCGCTTGCGGATCTGGCTGGCGAGT
CCGCCAAGATGCACGACGCCTATGTTGAGAAGTCGGACCATGCTACTCAT
GAAGATGGTACTATGGTGGTGAACGGTGATGACGTCGCAGTAGAGGAGGA
CTCTAGTGTCGCGCCCATCGCAAAGGAGGCTGTCTTCCTTAAGGGACAGA
GTAAGCGTATTTGGAACGAACTTTACAAGGTCATTGATTCCTCCGATGTT
GTCATCCATCTCCTTGATGCTCGTGATCCGGAAGGTACACGGTGCAGGAG
TATCGAAAAATACATCCGGGAGGAGGCTCCTCACAAGCACTTGATTTTCG
TCTTGAACAAGTGTGATCTTGTGCCTACAGGCGTGGCGATGGGTACCTTC
AAGAAGGAAGCCTCTCGTAAAGAGCGGCAGGGGAAGACTGGAGATGGCAT
GGGGAACGTCCGGGTAAAGGGTGAAAACTTTTACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOG2CAN33_5400Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5400-T1CAN33_5400-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5400-T1.cdsCAN33_5400-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5400-T1.exon4CAN33_5400-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_5400-T1.exon3CAN33_5400-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_5400-T1.exon2CAN33_5400-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_5400-T1.exon1CAN33_5400-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR030378
DBxrefInterPro:IPR012971
DBxrefInterPro:IPR023179
DBxrefInterPro:IPR006073
DBxrefPFAM:PF08153
ProductGTPase required for pre-60S ribosomal subunit nuclear export and maturation
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1001220..1003387 -
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