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CAN33_54000-T1, CAN33_54000-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54000-T1
Unique NameCAN33_54000-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2549032..2549838-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54000-T1 ID=CAN33_54000-T1|Name=CAN33_54000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=807bp|location=Sequence derived from alignment at NKJJ01000020.1:2549032..2549838- (Aspergillus niger FDAARGOS_311)
ATGCGCGAGCCGCGCACGGTCGTTACCATCGAGCCACTCCTGTCGAGCGT
TGCTCATCTCCCTCGACACCACCTGGGCTCAACTCTGTATGCGCCTCGGA
TCGGCGCACCTACCGAGAAGGCAACCTTGGAAAGTGCCAAGTTCGGTTAC
ACGACTACACCGCTTCCATTGCCTCGCTTTGAAGGCAAGGAGAACTGCAC
ATTTACGATTCGTGTGCCGCGTTTCCGCATCGACACCAGCCATCGCGAGG
AAATCTGCGCGCGTCGCGCCCTCTGGGGCACGGGTGTGTATACGGACGAC
TCCGACCCTGTTGCGGCGGCAATCCACTCTGGCTTCATCCGCGGTGCTTG
GGGTGAGGACGTGGATGTGGACCTACTGGACCTGGAAATTAGGGATTCGT
ATCAGCACGCACCTAAGACGGCGCAAGATGTTGGAGCGGAAGATGGCGAG
CGACCCCGGGTGCCGCCCGTGCCACCAAACGACAAGGACCTGCATATTAC
GCTGCTGATTCTACCCCGGCTGGAGCGGTACGACTCCAGCGTGTTGTTTG
GATTGAAGTCGAGAGCCTGGGAGGGCTCACATGACGGCATGAGCTTCAAG
GTGCAGCGAGTCGAGTGGGTAGATGAAGGGGTCGGGCGTGGTGAGGAGCG
CAGTGGCGAGGCGCGGCGCAAACGTCTGCGCAATCTGATGCAGACAGGAA
GGATCTGCACAGGACCGGGGGTGATCAAATTGGAGCAGCTGCGAAACGGG
GTGCAAATCCCCCGACGTAAGCAGCTGGAGGGACGGGAGTCGATGCAAGT
ATCTTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2549032..2549838-

>CAN33_54000-T1 ID=CAN33_54000-T1|Name=CAN33_54000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=807bp|location=Sequence derived from alignment at NKJJ01000020.1:2549032..2549838- (Aspergillus niger FDAARGOS_311)
ATGCGCGAGCCGCGCACGGTCGTTACCATCGAGCCACTCCTGTCGAGCGT
TGCTCATCTCCCTCGACACCACCTGGGCTCAACTCTGTATGCGCCTCGGA
TCGGCGCACCTACCGAGAAGGCAACCTTGGAAAGTGCCAAGTTCGGTTAC
ACGACTACACCGCTTCCATTGCCTCGCTTTGAAGGCAAGGAGAACTGCAC
ATTTACGATTCGTGTGCCGCGTTTCCGCATCGACACCAGCCATCGCGAGG
AAATCTGCGCGCGTCGCGCCCTCTGGGGCACGGGTGTGTATACGGACGAC
TCCGACCCTGTTGCGGCGGCAATCCACTCTGGCTTCATCCGCGGTGCTTG
GGGTGAGGACGTGGATGTGGACCTACTGGACCTGGAAATTAGGGATTCGT
ATCAGCACGCACCTAAGACGGCGCAAGATGTTGGAGCGGAAGATGGCGAG
CGACCCCGGGTGCCGCCCGTGCCACCAAACGACAAGGACCTGCATATTAC
GCTGCTGATTCTACCCCGGCTGGAGCGGTACGACTCCAGCGTGTTGTTTG
GATTGAAGTCGAGAGCCTGGGAGGGCTCACATGACGGCATGAGCTTCAAG
GTGCAGCGAGTCGAGTGGGTAGATGAAGGGGTCGGGCGTGGTGAGGAGCG
CAGTGGCGAGGCGCGGCGCAAACGTCTGCGCAATCTGATGCAGACAGGAA
GGATCTGCACAGGACCGGGGGTGATCAAATTGGAGCAGCTGCGAAACGGG
GTGCAAATCCCCCGACGTAAGCAGCTGGAGGGACGGGAGTCGATGCAAGT
ATCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016575histone deacetylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54000CAN33_54000Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54000-T1.cdsCAN33_54000-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54000-T1.exon1CAN33_54000-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54000-T1CAN33_54000-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013951
DBxrefInterPro:IPR036609
DBxrefPFAM:PF08642
ProductHistone deacetylation protein Rxt3 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2549032..2549838 -
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