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CAN33_54040-T1, CAN33_54040-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54040-T1
Unique NameCAN33_54040-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2571648..2572798-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54040-T1 ID=CAN33_54040-T1|Name=CAN33_54040-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1151bp|location=Sequence derived from alignment at NKJJ01000020.1:2571648..2572798- (Aspergillus niger FDAARGOS_311)
ATGATGACCTTCCGACCTCGAATGAGCCTCTTCTCTGCCCTTCGCACGGC
CCCAGCTCGACGCCGCTTTGCGACTGAGGCGCGGTTAACCACGGACCATG
TCCGCATCGTCGAAGTAGGGCCACGAGATGGTCTGCAGAACGAGAAAAAG
TCGATTCCACTTGAGACCAAGCTTCAGCTTATTGAGAAGCTTGCTAAGAC
AGGTGTAACCACAATTGAGGCGGGATCCTTTGTGCCGGCGAAATGGGTGC
CCCAGGTACGGACGTCTGCTTGCATCCGAAAGGAGTAACGACGACGCCAC
CTCTCCTTGGACTACAAAACTAACAGATATATGTATGATAGATGGCTAGC
ACTGCAGAGATCTGCGAGCACCTCCTCCAGACTCCCCCACAGTCACAGAC
CGCCATTGCCTACAACTACCTCGTCCCTAATGTGAGGGGTCTGGAGAACC
TGATCAAAATCATGGATGCCACAGGTGTCCCGGCAGACACGACAGGATCT
GCCACGAAAACCCCAACAACAACCGAGATTTCTCTGTTCGCAGCAGCAAC
AGAGGCGTTCTCCAAGGCCAACACAAACTGCACAATCGAGGAGTCACTAG
ATCGCATCCGTCCAATCGTCTCGCTAGCAAAGACGAAGAACATCCGAGTG
AGGGGCTATGTTTCGGTTGCTCTGGGTTGTCCGTACGAGGGTCCGGATGT
ATCCCCATCCAAGGTGGCCGACATCACTGCAACGCTACTTGAAATGGGAG
CCGATGAGGTGTCGGTGGCTGATACCACGGGCATGGGCACGGCACCCCGC
ACGATGAAGCTACTGCAGGCTCTGAAGGCGGCCGGGATTGCGAATAATGA
TCTGGCACTGCACTTCCATGATACTTATGGACAGGCTCTCGTCAATACTA
TCGTAGGGCTGGAGCATGGTATCCGCATCTTCGATAGCAGTGTTGGTGGT
CTTGGTGGTTGCCCTTACTCGAAGGGTGCAACGGGGAATGTCTCGACAGA
GGACCTTGTACATACCATCCATGGTCTGGGCATGCACACTGGTATCAACC
TGGAGGAAATGGCCAAGATTGGCTCCTGGATTAGTGGGGAGCTGGGCCGG
TTCAATGAGAGTCGTGCGGGCAAGGCCATACTGGCGCGGATGGAAGAGTG
A
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2571648..2572798-

>CAN33_54040-T1 ID=CAN33_54040-T1|Name=CAN33_54040-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2130bp|location=Sequence derived from alignment at NKJJ01000020.1:2571648..2572798- (Aspergillus niger FDAARGOS_311)
ATGGCTAGCACTGCAGAGATCTGCGAGCACCTCCTCCAGACTCCCCCACA
GTCACAGACCGCCATTGCCTACAACTACCTCGTCCCTAATGTGAGGGGTC
TGGAGAACCTGATCAAAATCATGGATGCCACAGGTGTCCCGGCAGACACG
ACAGGATCTGCCACGAAAACCCCAACAACAACCGAGATTTCTCTGTTCGC
AGCAGCAACAGAGGCGTTCTCCAAGGCCAACACAAACTGCACAATCGAGG
AGTCACTAGATCGCATCCGTCCAATCGTCTCGCTAGCAAAGACGAAGAAC
ATCCGAGTGAGGGGCTATGTTTCGGTTGCTCTGGGTTGTCCGTACGAGGG
TCCGGATGTATCCCCATCCAAGGTGGCCGACATCACTGCAACGCTACTTG
AAATGGGAGCCGATGAGGTGTCGGTGGCTGATACCACGGGCATGGGCACG
GCACCCCGCACGATGAAGCTACTGCAGGCTCTGAAGGCGGCCGGGATTGC
GAATAATGATCTGGCACTGCACTTCCATGATACTTATGGACAGGCTCTCG
TCAATACTATCGTAGGGCTGGAGCATGGTATCCGCATCTTCGATAGCAGT
GTTGGTGGTCTTGGTGGTTGCCCTTACTCGAAGGGTGCAACGGGGAATGT
CTCGACAGAGGACCTTGTACATACCATCCATGGTCTGGGCATGCACACTG
GTATCAACCTGGAGGAAATGGCCAAGATTGGCTCCTGGATTAGTGGGGAG
CTGGGCCGGTTCAATGAGAGTCGTGCGGGCAAGGCCATACTGGCGCGGAT
GGAAGAGTGAATGATGACCTTCCGACCTCGAATGAGCCTCTTCTCTGCCC
TTCGCACGGCCCCAGCTCGACGCCGCTTTGCGACTGAGGCGCGGTTAACC
ACGGACCATGTCCGCATCGTCGAAGTAGGGCCACGAGATGGTCTGCAGAA
CGAGAAAAAGTCGATTCCACTTGAGACCAAGCTTCAGCTTATTGAGAAGC
TTGCTAAGACAGGTGTAACCACAATTGAGGCGGGATCCTTTGTGCCGGCG
AAATGGGTGCCCCAGATGGCTAGCACTGCAGAGATCTGCGAGCACCTCCT
CCAGACTCCCCCACAGTCACAGACCGCCATTGCCTACAACTACCTCGTCC
CTAATGTGAGGGGTCTGGAGAACCTGATCAAAATCATGGATGCCACAGGT
GTCCCGGCAGACACGACAGGATCTGCCACGAAAACCCCAACAACAACCGA
GATTTCTCTGTTCGCAGCAGCAACAGAGGCGTTCTCCAAGGCCAACACAA
ACTGCACAATCGAGGAGTCACTAGATCGCATCCGTCCAATCGTCTCGCTA
GCAAAGACGAAGAACATCCGAGTGAGGGGCTATGTTTCGGTTGCTCTGGG
TTGTCCGTACGAGGGTCCGGATGTATCCCCATCCAAGGTGGCCGACATCA
CTGCAACGCTACTTGAAATGGGAGCCGATGAGGTGTCGGTGGCTGATACC
ACGGGCATGGGCACGGCACCCCGCACGATGAAGCTACTGCAGGCTCTGAA
GGCGGCCGGGATTGCGAATAATGATCTGGCACTGCACTTCCATGATACTT
ATGGACAGGCTCTCGTCAATACTATCGTAGGGCTGGAGCATGGTATCCGC
ATCTTCGATAGCAGTGTTGGTGGTCTTGGTGGTTGCCCTTACTCGAAGGG
TGCAACGGGGAATGTCTCGACAGAGGACCTTGTACATACCATCCATGGTC
TGGGCATGCACACTGGTATCAACCTGGAGGAAATGGCCAAGATTGGCTCC
TGGATTAGTGGGGAGCTGGGCCGGTTCAATGAGAGTCGTGCGGGCAAGGC
CATACTGGCGCGGATGGAAGAGTGAATGATGACCTTCCGACCTCGAATGA
GCCTCTTCTCTGCCCTTCGCACGGCCCCAGCTCGACGCCGCTTTGCGACT
GAGGCGCGGTTAACCACGGACCATGTCCGCATCGTCGAAGTAGGGCCACG
AGATGGTCTGCAGAACGAGAAAAAGTCGATTCCACTTGAGACCAAGCTTC
AGCTTATTGAGAAGCTTGCTAAGACAGGTGTAACCACAATTGAGGCGGGA
TCCTTTGTGCCGGCGAAATGGGTGCCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54040CAN33_54040Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54040-T1CAN33_54040-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54040-T1.cdsCAN33_54040-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54040-T1.exon2CAN33_54040-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54040-T1.exon1CAN33_54040-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR000891
DBxrefPFAM:PF00682
ProductHMGL-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2571648..2572798 -
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