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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2574703..2577492- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54050-T1 ID=CAN33_54050-T1|Name=CAN33_54050-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2790bp|location=Sequence derived from alignment at NKJJ01000020.1:2574703..2577492- (Aspergillus niger FDAARGOS_311)
ATGCCTCCTCTATCGGTCTACACGCCTTTTGAATCTCTCCTCTTCTTCCA
GTCTCTCGCCGGCCTAGAATCTCCCCCCGCGAATTTTACCTCCATCTCCG
ATGTGCTCCGCAACAATCCCTTCATTCGAGAGAATGCCGCCTACGATGCG
GGCAGACTCAGCCCAGAAGCCTTGGAGGATCTCTACACGACGCTGATGCG
AGATGGCTGGGACTCGACCAATGCTGGACCCAACGGCCACCATGCCGAGA
GTGCGACCCCCAATAACCCAAAAAAGCGCAAGATATCCAGTCCTCGACCT
GATGGCTTGGCGGACAAAGTTCATAACCATGCCAGCAAAGTGCCGGGGCT
AGTGTCGCATTTGTATGCCAGATACAAGGAGTTGGTAACGCGGGAGATTG
AGGATGAAGAGCAGAGATATAGGGATATCAGAAAAGAGATTGACCAGCTA
CAGAAGGAGGACCGCGATGCGCTCTCGGAGACCTCCGCAAGACCGACAGC
GGCGCAGCCGATTGCGCCAGCGAAGCAGGAGCCCGCGCCAGAACCGATGG
ATGTGGATATGAAGGAACAGAAACCAATTCAACGGCCCCGCGATGAAGCT
ATGCATGTTGCGACACCGTTGGTAGCTGCTGATGTTAAGCAGCCTCTCCT
GGAACCGCAGCGGAAGGAGCTGGATACAAGCAAGCAACCCGCGAAGCCTG
TCGCGCGCCCACCGCAGGAACCCCAGCCTCTGCCCGCGCAGTCTGTACGG
GCCGTCGAATTGCCACCGGCAGATAAGACAAAGCTCCAGCAACAGCCTCA
GCCTCAGCCACTGCCACAGCAACAGCCTCAACAGCCGCCGCAACCGTCAC
CTCGTCCTCAGCCCAGCCCTCAGATAGCGACTGGTCGGCCGCCTCAGCAG
CCACCGGTCCTAAATGGAAAGGCGTTCCCGACACCAACACAACCAACTAT
TGTGCCCAAGAATGCCCCTGTGAACCACGCACCAGTGGCCGCGCCACCTG
CTCCGTCGCCAAAACCGCCGAATGCCTCAGTACCCAGTCCGGGTGTCGCA
CGCCCTCCCGCTGTTACACCTTCGCAAGCTCCGCAGAATGCCGGTGTGCC
AATCCCTTCCACTCCGCAACAGCAAGTCCTGGCCAGCAAGCCCTCTGCCA
AGGAAGATCAGTCTGTTCCAGCTGCTAGCCCGGCGCCTCAGCGACCTCCA
CCGCAGGCCAGTTTCCAGCAGTGGTCTCTAAACAAACCTCCGCAAACGCC
ACAACCTCCCCCAGCATTCGCAAAGCCGAAACCAGAACCGACGAACGCCG
CTGTTGCTGGGCGTGCGGTTCAGTCTCCATTCCCTCCACCCACCCCAGCC
CTCGAAAGCAAGAAGGCAGCGCAAGGACCACGACCAACCCCTGGTCCGTC
GACTCCAGGTCCTGTGCCCGCGGCTGCCCACACACCTGCCCAGAATATTC
CACCACCCGCGTTCCAGACTCCGGTTGGGCCTGCGCAGGGTTCTATCCTT
TCGCGGCCACCGAGCACACGGCCCCTTAGGCCTTCGATTGACACGGGAGT
TCTTACACCTGGCTCTCTCACGCCTTGGAAGCGGACTCCACGGTTGAGCA
TCCCCCACTCTCCTCGTTCGCCCGAGCGACCACGGCCAGAGGAGATCAGT
CCTATCAGTGAGAAGGCGCCGTCTTTGCCGGGATCTCGTGAGCCGACGCC
AGAAGAGCCTGAGCCTCGCCGTCGAAAGCGGAGGACGGAGACAAAAAGTA
ATGGGACCGGCGCCGATCAGACCCTGTCGATTGATGCAGAAAGCAAGGGA
GGGACTAAAAGGAAGAGTGAGAGGGGAACGCTGTCTAGCGGTAAGGACCG
TGACCGAAGCACGGCGTCGTCACGAAGCCGGGGAAGGTCTGTGTTGTCAC
GGGATGAAGAGTCCACAGCAGATACGGGCACTGGATCCCAGGCAAAAATC
AAGCATGAAGTACCCAGTACCCCAGCTGGCATCCCAGAGACGGCTGAACC
CGAACGTCCCTCGGTCAGTCGGCCGAGCAGGGGGCGACCGAAGCGCAAGC
GTGCTCCGAGTGAGAGCCTAGAGGCCGAACCTACTCAGTCGGAGCTAAGC
CAGCTTACTCGCGCTGACCCTAATCAGTCGACGACGTATGTAGTCTGCGC
TCGCAATTTCCCTCGGACCGGAGCTCCTATCATGAGTGAATTGAGCATGC
ACAAGGTTGCGGGAACCTTTTCCAAGCCGCTGACGGAACGTGACGCACCG
GGATACCGCGACCTTATCTATCGGCCGCAAGATATCAAGACTATCAAGTC
GCTGATCCACCAGGGCAGCAGGGCACTGGCGGCAGCTACGGAGGCTGCAA
GCACACCGGCAGGCGACGGGGAGTCACCGGCGCCGGGTACAGGGACCCCT
TCTAAGAATGCTGTCCTTATGTTGCAAAAGACAGAGGACATCATTCCCCC
AAAGGGTATTGTCAATTCGGCGCAGCTAGAGAAGGAGTTGATCCGCATGT
TCGCCAACGCCGTGATGTTCAACCCTATCCCTCAACGTGGCTTTGGGCCT
GCTTTCCCTATGATCAGCGATAGCGGATCAAGAGAGAGCACGCAGGTTCC
CGAACACGAGGAGGGCGGTATCATCAAGGACACGCTGGAGATGTTCGAGG
ATGTCGAGCAAGCCGTTACGCGATGGCGCGCAGCAGAGCGGACAGCGGAC
GAATTTGCTAGCAAAAGCATCCTCTCGCTCCGGCGAGGGAGTGCCAGTGA
TCTCAACACGGATAGTGCGGATGAGGTCAAAGGATCATGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2574703..2577492- >CAN33_54050-T1 ID=CAN33_54050-T1|Name=CAN33_54050-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5274bp|location=Sequence derived from alignment at NKJJ01000020.1:2574703..2577492- (Aspergillus niger FDAARGOS_311)
CAGCCACCGGTCCTAAATGGAAAGGCGTTCCCGACACCAACACAACCAAC
TATTGTGCCCAAGAATGCCCCTGTGAACCACGCACCAGTGGCCGCGCCAC
CTGCTCCGTCGCCAAAACCGCCGAATGCCTCAGTACCCAGTCCGGGTGTC
GCACGCCCTCCCGCTGTTACACCTTCGCAAGCTCCGCAGAATGCCGGTGT
GCCAATCCCTTCCACTCCGCAACAGCAAGTCCTGGCCAGCAAGCCCTCTG
CCAAGGAAGATCAGTCTGTTCCAGCTGCTAGCCCGGCGCCTCAGCGACCT
CCACCGCAGGCCAGTTTCCAGCAGTGGTCTCTAAACAAACCTCCGCAAAC
GCCACAACCTCCCCCAGCATTCGCAAAGCCGAAACCAGAACCGACGAACG
CCGCTGTTGCTGGGCGTGCGGTTCAGTCTCCATTCCCTCCACCCACCCCA
GCCCTCGAAAGCAAGAAGGCAGCGCAAGGACCACGACCAACCCCTGGTCC
GTCGACTCCAGGTCCTGTGCCCGCGGCTGCCCACACACCTGCCCAGAATA
TTCCACCACCCGCGTTCCAGACTCCGGTTGGGCCTGCGCAGGGTTCTATC
CTTTCGCGGCCACCGAGCACACGGCCCCTTAGGCCTTCGATTGACACGGG
AGTTCTTACACCTGGCTCTCTCACGCCTTGGAAGCGGACTCCACGGTTGA
GCATCCCCCACTCTCCTCGTTCGCCCGAGCGACCACGGCCAGAGGAGATC
AGTCCTATCAGTGAGAAGGCGCCGTCTTTGCCGGGATCTCGTGAGCCGAC
GCCAGAAGAGCCTGAGCCTCGCCGTCGAAAGCGGAGGACGGAGACAAAAA
GTAATGGGACCGGCGCCGATCAGACCCTGTCGATTGATGCAGAAAGCAAG
GGAGGGACTAAAAGGAAGAGTGAGAGGGGAACGCTGTCTAGCGGTAAGGA
CCGTGACCGAAGCACGGCGTCGTCACGAAGCCGGGGAAGGTCTGTGTTGT
CACGGGATGAAGAGTCCACAGCAGATACGGGCACTGGATCCCAGGCAAAA
ATCAAGCATGAAGTACCCAGTACCCCAGCTGGCATCCCAGAGACGGCTGA
ACCCGAACGTCCCTCGGTCAGTCGGCCGAGCAGGGGGCGACCGAAGCGCA
AGCGTGCTCCGAGTGAGAGCCTAGAGGCCGAACCTACTCAGTCGGAGCTA
AGCCAGCTTACTCGCGCTGACCCTAATCAGTCGACGACGTATGTAGTCTG
CGCTCGCAATTTCCCTCGGACCGGAGCTCCTATCATGAGTGAATTGAGCA
TGCACAAGGTTGCGGGAACCTTTTCCAAGCCGCTGACGGAACGTGACGCA
CCGGGATACCGCGACCTTATCTATCGGCCGCAAGATATCAAGACTATCAA
GTCGCTGATCCACCAGGGCAGCAGGGCACTGGCGGCAGCTACGGAGGCTG
CAAGCACACCGGCAGGCGACGGGGAGTCACCGGCGCCGGGTACAGGGACC
CCTTCTAAGAATGCTGTCCTTATGTTGCAAAAGACAGAGGACATCATTCC
CCCAAAGGGTATTGTCAATTCGGCGCAGCTAGAGAAGGAGTTGATCCGCA
TGTTCGCCAACGCCGTGATGTTCAACCCTATCCCTCAACGTGGCTTTGGG
CCTGCTTTCCCTATGATCAGCGATAGCGGATCAAGAGAGAGCACGCAGGT
TCCCGAACACGAGGAGGGCGGTATCATCAAGGACACGCTGGAGATGTTCG
AGGATGTCGAGCAAGCCGTTACGCGATGGCGCGCAGCAGAGCGGACAGCG
GACGAATTTGCTAGCAAAAGCATCCTCTCGCTCCGGCGAGGGAGTGCCAG
TGATCTCAACACGGATAGTGCGGATGAGGTCAAAGGATCATGAATGCCTC
CTCTATCGGTCTACACGCCTTTTGAATCTCTCCTCTTCTTCCAGTCTCTC
GCCGGCCTAGAATCTCCCCCCGCGAATTTTACCTCCATCTCCGATGTGCT
CCGCAACAATCCCTTCATTCGAGAGAATGCCGCCTACGATGCGGGCAGAC
TCAGCCCAGAAGCCTTGGAGGATCTCTACACGACGCTGATGCGAGATGGC
TGGGACTCGACCAATGCTGGACCCAACGGCCACCATGCCGAGAGTGCGAC
CCCCAATAACCCAAAAAAGCGCAAGATATCCAGTCCTCGACCTGATGGCT
TGGCGGACAAAGTTCATAACCATGCCAGCAAAGTGCCGGGGCTAGTGTCG
CATTTGTATGCCAGATACAAGGAGTTGGTAACGCGGGAGATTGAGGATGA
AGAGCAGAGATATAGGGATATCAGAAAAGAGATTGACCAGCTACAGAAGG
AGGACCGCGATGCGCTCTCGGAGACCTCCGCAAGACCGACAGCGGCGCAG
CCGATTGCGCCAGCGAAGCAGGAGCCCGCGCCAGAACCGATGGATGTGGA
TATGAAGGAACAGAAACCAATTCAACGGCCCCGCGATGAAGCTATGCATG
TTGCGACACCGTTGGTAGCTGCTGATGTTAAGCAGCCTCTCCTGGAACCG
CAGCGGAAGGAGCTGGATACAAGCAAGCAACCCGCGAAGCCTGTCGCGCG
CCCACCGCAGGAACCCCAGCCTCTGCCCGCGCAGTCTCAGCCACCGGTCC
TAAATGGAAAGGCGTTCCCGACACCAACACAACCAACTATTGTGCCCAAG
AATGCCCCTGTGAACCACGCACCAGTGGCCGCGCCACCTGCTCCGTCGCC
AAAACCGCCGAATGCCTCAGTACCCAGTCCGGGTGTCGCACGCCCTCCCG
CTGTTACACCTTCGCAAGCTCCGCAGAATGCCGGTGTGCCAATCCCTTCC
ACTCCGCAACAGCAAGTCCTGGCCAGCAAGCCCTCTGCCAAGGAAGATCA
GTCTGTTCCAGCTGCTAGCCCGGCGCCTCAGCGACCTCCACCGCAGGCCA
GTTTCCAGCAGTGGTCTCTAAACAAACCTCCGCAAACGCCACAACCTCCC
CCAGCATTCGCAAAGCCGAAACCAGAACCGACGAACGCCGCTGTTGCTGG
GCGTGCGGTTCAGTCTCCATTCCCTCCACCCACCCCAGCCCTCGAAAGCA
AGAAGGCAGCGCAAGGACCACGACCAACCCCTGGTCCGTCGACTCCAGGT
CCTGTGCCCGCGGCTGCCCACACACCTGCCCAGAATATTCCACCACCCGC
GTTCCAGACTCCGGTTGGGCCTGCGCAGGGTTCTATCCTTTCGCGGCCAC
CGAGCACACGGCCCCTTAGGCCTTCGATTGACACGGGAGTTCTTACACCT
GGCTCTCTCACGCCTTGGAAGCGGACTCCACGGTTGAGCATCCCCCACTC
TCCTCGTTCGCCCGAGCGACCACGGCCAGAGGAGATCAGTCCTATCAGTG
AGAAGGCGCCGTCTTTGCCGGGATCTCGTGAGCCGACGCCAGAAGAGCCT
GAGCCTCGCCGTCGAAAGCGGAGGACGGAGACAAAAAGTAATGGGACCGG
CGCCGATCAGACCCTGTCGATTGATGCAGAAAGCAAGGGAGGGACTAAAA
GGAAGAGTGAGAGGGGAACGCTGTCTAGCGGTAAGGACCGTGACCGAAGC
ACGGCGTCGTCACGAAGCCGGGGAAGGTCTGTGTTGTCACGGGATGAAGA
GTCCACAGCAGATACGGGCACTGGATCCCAGGCAAAAATCAAGCATGAAG
TACCCAGTACCCCAGCTGGCATCCCAGAGACGGCTGAACCCGAACGTCCC
TCGGTCAGTCGGCCGAGCAGGGGGCGACCGAAGCGCAAGCGTGCTCCGAG
TGAGAGCCTAGAGGCCGAACCTACTCAGTCGGAGCTAAGCCAGCTTACTC
GCGCTGACCCTAATCAGTCGACGACGTATGTAGTCTGCGCTCGCAATTTC
CCTCGGACCGGAGCTCCTATCATGAGTGAATTGAGCATGCACAAGGTTGC
GGGAACCTTTTCCAAGCCGCTGACGGAACGTGACGCACCGGGATACCGCG
ACCTTATCTATCGGCCGCAAGATATCAAGACTATCAAGTCGCTGATCCAC
CAGGGCAGCAGGGCACTGGCGGCAGCTACGGAGGCTGCAAGCACACCGGC
AGGCGACGGGGAGTCACCGGCGCCGGGTACAGGGACCCCTTCTAAGAATG
CTGTCCTTATGTTGCAAAAGACAGAGGACATCATTCCCCCAAAGGGTATT
GTCAATTCGGCGCAGCTAGAGAAGGAGTTGATCCGCATGTTCGCCAACGC
CGTGATGTTCAACCCTATCCCTCAACGTGGCTTTGGGCCTGCTTTCCCTA
TGATCAGCGATAGCGGATCAAGAGAGAGCACGCAGGTTCCCGAACACGAG
GAGGGCGGTATCATCAAGGACACGCTGGAGATGTTCGAGGATGTCGAGCA
AGCCGTTACGCGATGGCGCGCAGCAGAGCGGACAGCGGACGAATTTGCTA
GCAAAAGCATCCTCTCGCTCCGGCGAGGGAGTGCCAGTGATCTCAACACG
GATAGTGCGGATGAGGTCAAAGGATCATGAATGCCTCCTCTATCGGTCTA
CACGCCTTTTGAATCTCTCCTCTTCTTCCAGTCTCTCGCCGGCCTAGAAT
CTCCCCCCGCGAATTTTACCTCCATCTCCGATGTGCTCCGCAACAATCCC
TTCATTCGAGAGAATGCCGCCTACGATGCGGGCAGACTCAGCCCAGAAGC
CTTGGAGGATCTCTACACGACGCTGATGCGAGATGGCTGGGACTCGACCA
ATGCTGGACCCAACGGCCACCATGCCGAGAGTGCGACCCCCAATAACCCA
AAAAAGCGCAAGATATCCAGTCCTCGACCTGATGGCTTGGCGGACAAAGT
TCATAACCATGCCAGCAAAGTGCCGGGGCTAGTGTCGCATTTGTATGCCA
GATACAAGGAGTTGGTAACGCGGGAGATTGAGGATGAAGAGCAGAGATAT
AGGGATATCAGAAAAGAGATTGACCAGCTACAGAAGGAGGACCGCGATGC
GCTCTCGGAGACCTCCGCAAGACCGACAGCGGCGCAGCCGATTGCGCCAG
CGAAGCAGGAGCCCGCGCCAGAACCGATGGATGTGGATATGAAGGAACAG
AAACCAATTCAACGGCCCCGCGATGAAGCTATGCATGTTGCGACACCGTT
GGTAGCTGCTGATGTTAAGCAGCCTCTCCTGGAACCGCAGCGGAAGGAGC
TGGATACAAGCAAGCAACCCGCGAAGCCTGTCGCGCGCCCACCGCAGGAA
CCCCAGCCTCTGCCCGCGCAGTCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036427 |
| DBxref | InterPro:IPR001487 |
| DBxref | PFAM:PF00439 |
| Product | Bromodomain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2574703..2577492 - |
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