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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2642351..2643307- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54170-T1 ID=CAN33_54170-T1|Name=CAN33_54170-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=957bp|location=Sequence derived from alignment at NKJJ01000020.1:2642351..2643307- (Aspergillus niger FDAARGOS_311)
ATGGGTCCGCAGCTGAAGATGTTCTCGGGCCTCAGATGGCCTTCCTCCGG
CCGTCGTGTGAGATTCCCGCAAGCCTCCCCAAGAAAAGTTTTTTATATCC
TGACTTCGATGCCGTACAGTAGGTCTGTCGACGCCATTCACGGCTTTCCC
TCTATCGCGATGCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACCC
CTAAGTTCGCCGAGAGATCCAAGTCCCCTAAGGGTCGTCCGCATGTCGCA
ACTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCTT
GCGGATGAAGGACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATTG
CGGAGGATACGATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTAC
AAGCGCGTGAGCGCAAACATCGGTGTCTACACCAAGGGCAACGAACAACG
TATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGCG
TGAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGCC
AGGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCCCGGTACGTTACATCC
ACCTGATGATATTCTCCAATTATCAACATACGGTAAACTAATTATACAAC
GGCTGCAGGCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGTTG
GACTGACGAAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCGCA
CGCAGAAGCCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCGACCTCG
ACCTCGTCCTCCTCCAGTCCCTCTGCTCCCCAATAATTCAAAGCGCTCCC
TCTCAACCAAACCTCTCAATCACGCCAATTCACCCCGGTTCAATCACAAC
GTCATGACATCTAAGCCCCGACGCCCGAACCAGGTCCATACCCTTGTTCT
CTCCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2642351..2643307- >CAN33_54170-T1 ID=CAN33_54170-T1|Name=CAN33_54170-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2457bp|location=Sequence derived from alignment at NKJJ01000020.1:2642351..2643307- (Aspergillus niger FDAARGOS_311)
GCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGTTGGACTGACG
AAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCGCACGCAGAAG
CCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCGACCTCGACCTCGTC
CTCCTCCAGTCCCTCTGCTCCCCAATAATTCAAAGCGCTCCCTCTCAACC
AAACCTCTCAATCACGCCAATTCACCCCGGTTCAATCACAACGTCATGAC
ATCTAAGCCCCGACGCCCGAACCAGGTCCATACCCTTGTTCTCTCCTGAG
TCTGTCGACGCCATTCACGGCTTTCCCTCTATCGCGATGCTTCTCGACGA
CTTCGCCTGCCCTCGATTGGCTTACCCCTAAGTTCGCCGAGAGATCCAAG
TCCCCTAAGGGTCGTCCGCATGTCGCAACTGGTGGTTCTTCCCGCGGTAC
TACCGTCGTCTGGGGTGATTATGGCTTGCGGATGAAGGACCACGACCGTC
GGTTGCCCGCTGCCTCGTTGAAAATTGCGGAGGATACGATTAAGAGACGT
CTGAGGGGTATGAACTACACATTGTACAAGCGCGTGAGCGCAAACATCGG
TGTCTACACCAAGGGCAACGAACAACGTATGGGTAAGGGTAAGGGAAAGT
TCGACTACTGGACGGCGAAGGTTGGCGTGAGCAGAATTGTCTTTGAGCTC
AAGGGTGATCTGCACGAAAAGGTCGCCAGGGAGGCCTTCCGTCTGGCCGG
CCACAAGCTGCCCGATGGGTCCGCAGCTGAAGATGTTCTCGGGCCTCAGA
TGGCCTTCCTCCGGCCGTCGCCTCTGGGAATTCGTGAAGAAGGGTGACCC
GCCGGTCGTTGGACTGACGAAACTTGGCAACGGAGTGACTCTGGAGAGCC
TCAAACGCGCACGCAGAAGCCCGGCCCTCGGTACTCAGGACCTACCGAAC
CCCCGACCTCGACCTCGTCCTCCTCCAGTCCCTCTGCTCCCCAATAATTC
AAAGCGCTCCCTCTCAACCAAACCTCTCAATCACGCCAATTCACCCCGGT
TCAATCACAACGTCATGACATCTAAGCCCCGACGCCCGAACCAGGTCCAT
ACCCTTGTTCTCTCCTGAGTCTGTCGACGCCATTCACGGCTTTCCCTCTA
TCGCGATGCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACCCCTAA
GTTCGCCGAGAGATCCAAGTCCCCTAAGGGTCGTCCGCATGTCGCAACTG
GTGGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCTTGCGG
ATGAAGGACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATTGCGGA
GGATACGATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTACAAGC
GCGTGAGCGCAAACATCGGTGTCTACACCAAGGGCAACGAACAACGTATG
GGTAAGGGTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGCGTGAG
CAGAATTGTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGCCAGGG
AGGCCTTCCGTCTGGCCGGCCACAAGCTGCCCGATGGGTCCGCAGCTGAA
GATGTTCTCGGGCCTCAGATGGCCTTCCTCCGGCCGTCGCCTCTGGGAAT
TCGTGAAGAAGGGTGACCCGCCGGTCGTTGGACTGACGAAACTTGGCAAC
GGAGTGACTCTGGAGAGCCTCAAACGCGCACGCAGAAGCCCGGCCCTCGG
TACTCAGGACCTACCGAACCCCCGACCTCGACCTCGTCCTCCTCCAGTCC
CTCTGCTCCCCAATAATTCAAAGCGCTCCCTCTCAACCAAACCTCTCAAT
CACGCCAATTCACCCCGGTTCAATCACAACGTCATGACATCTAAGCCCCG
ACGCCCGAACCAGGTCCATACCCTTGTTCTCTCCTGAGTCTGTCGACGCC
ATTCACGGCTTTCCCTCTATCGCGATGCTTCTCGACGACTTCGCCTGCCC
TCGATTGGCTTACCCCTAAGTTCGCCGAGAGATCCAAGTCCCCTAAGGGT
CGTCCGCATGTCGCAACTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTG
GGGTGATTATGGCTTGCGGATGAAGGACCACGACCGTCGGTTGCCCGCTG
CCTCGTTGAAAATTGCGGAGGATACGATTAAGAGACGTCTGAGGGGTATG
AACTACACATTGTACAAGCGCGTGAGCGCAAACATCGGTGTCTACACCAA
GGGCAACGAACAACGTATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGA
CGGCGAAGGTTGGCGTGAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTG
CACGAAAAGGTCGCCAGGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCC
CGATGGGTCCGCAGCTGAAGATGTTCTCGGGCCTCAGATGGCCTTCCTCC
GGCCGTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0019843 | rRNA binding |
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09264T3S |
| DBxref | InterPro:IPR020798 |
| DBxref | InterPro:IPR016180 |
| DBxref | InterPro:IPR036920 |
| DBxref | InterPro:IPR000114 |
| DBxref | PFAM:PF00252 |
| Product | Ribosomal protein L16p/L10e family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2642351..2643307 - |
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