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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2783935..2784755+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54355-T1 ID=CAN33_54355-T1|Name=CAN33_54355-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=821bp|location=Sequence derived from alignment at NKJJ01000020.1:2783935..2784755+ (Aspergillus niger FDAARGOS_311)
ATGGCTCCCCCGCGGCAGCGGACGACAGCCGCTCAGGATGACTCTCGCTC
TGAAGGCTCCAGCACTGCAAGAGAGCATAAAACGACAACGGGCAAGTCTC
GCAAGGGTGCTGGCGGAGCAGCTGCAGTGGCCGCTTTGAACAGTCGCGAG
GCAAAAGCCTCTGCGATTTCTGCAAACGTCACCAGCGCTCCAGCTGGAGG
CGAACAGGACAATTTACCAAAGGTACGCTGCAGTCGGGGTTAACCTGCTC
TTTCTTGATTATAGATTCATTATCTTCTCCATATCACTTCTTTTCATACT
GTGGTATCATATCTGACATGGATTGGATGTAGATCCCCTGGTCCGACATG
CCCCTCGAACTCCTCCATTCCTATCGACATGCCTACAAACTGTCTACCCC
AAGCGCGTTCGCCAGCGAATACTCCCACCTGCTACTCTCTCGTGGAATCG
GACTCCGATCACCAACTTCTATCGCTGCCCAGAGAGCACACCTAGCCCGC
CAGGACCAGACGACGAATGGCTCCCAATCGAGCGCATCCACATCCCGAAA
AGCTCTGCAGAGCAATTCCTCCGCTCCGAATGGCGTCAGCACAAGACACA
AAGACCGTCCTTCGAATAAAGGCCCAGATACAATTGATACCAAGGGTGCG
CTGCATCACATAATTGGTCAGGAAAGGGTATGCAAGAACCAGCTTGCCGT
AACAGTGCGCAAACACTTCAACAGCGCCGGTCTTGCGGAACAGGAAGCTA
TTGCGCGGTTCCTGTACAAAGTCCGTGAAGAAGGCAGAGGACGACACTTC
CGTCTCAGGTTCCAGCCATAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2783935..2784755+ >CAN33_54355-T1 ID=CAN33_54355-T1|Name=CAN33_54355-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1422bp|location=Sequence derived from alignment at NKJJ01000020.1:2783935..2784755+ (Aspergillus niger FDAARGOS_311)
ATGGCTCCCCCGCGGCAGCGGACGACAGCCGCTCAGGATGACTCTCGCTC
TGAAGGCTCCAGCACTGCAAGAGAGCATAAAACGACAACGGGCAAGTCTC
GCAAGGGTGCTGGCGGAGCAGCTGCAGTGGCCGCTTTGAACAGTCGCGAG
GCAAAAGCCTCTGCGATTTCTGCAAACGTCACCAGCGCTCCAGCTGGAGG
CGAACAGGACAATTTACCAAAGATCCCCTGGTCCGACATGCCCCTCGAAC
TCCTCCATTCCTATCGACATGCCTACAAACTGTCTACCCCAAGCGCGTTC
GCCAGCGAATACTCCCACCTGCTACTCTCTCGTGGAATCGGACTCCGATC
ACCAACTTCTATCGCTGCCCAGAGAGCACACCTAGCCCGCCAGGACCAGA
CGACGAATGGCTCCCAATCGAGCGCATCCACATCCCGAAAAGCTCTGCAG
AGCAATTCCTCCGCTCCGAATGGCGTCAGCACAAGACACAAAGACCGTCC
TTCGAATAAAGGCCCAGATACAATTGATACCAAGGGTGCGCTGCATCACA
TAATTGGTCAGGAAAGGGTATGCAAGAACCAGCTTGCCGTAACAGTGCGC
AAACACTTCAACAGCGCCGGTCTTGCGGAACAGGAAGCTATTGCGCGGTT
CCTGTACAAAGTCCGTGAAGAAGGCAGAGGACGACACTTCCGTCTCAGGT
TCCAGCCATAGATGGCTCCCCCGCGGCAGCGGACGACAGCCGCTCAGGAT
GACTCTCGCTCTGAAGGCTCCAGCACTGCAAGAGAGCATAAAACGACAAC
GGGCAAGTCTCGCAAGGGTGCTGGCGGAGCAGCTGCAGTGGCCGCTTTGA
ACAGTCGCGAGGCAAAAGCCTCTGCGATTTCTGCAAACGTCACCAGCGCT
CCAGCTGGAGGCGAACAGGACAATTTACCAAAGATCCCCTGGTCCGACAT
GCCCCTCGAACTCCTCCATTCCTATCGACATGCCTACAAACTGTCTACCC
CAAGCGCGTTCGCCAGCGAATACTCCCACCTGCTACTCTCTCGTGGAATC
GGACTCCGATCACCAACTTCTATCGCTGCCCAGAGAGCACACCTAGCCCG
CCAGGACCAGACGACGAATGGCTCCCAATCGAGCGCATCCACATCCCGAA
AAGCTCTGCAGAGCAATTCCTCCGCTCCGAATGGCGTCAGCACAAGACAC
AAAGACCGTCCTTCGAATAAAGGCCCAGATACAATTGATACCAAGGGTGC
GCTGCATCACATAATTGGTCAGGAAAGGGTATGCAAGAACCAGCTTGCCG
TAACAGTGCGCAAACACTTCAACAGCGCCGGTCTTGCGGAACAGGAAGCT
ATTGCGCGGTTCCTGTACAAAGTCCGTGAAGAAGGCAGAGGACGACACTT
CCGTCTCAGGTTCCAGCCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR038291 |
| DBxref | InterPro:IPR025718 |
| DBxref | PFAM:PF13867 |
| Product | Sin3 binding region of histone deacetylase complex subunit SAP30 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2783935..2784755 + |
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