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CAN33_54445-T1, CAN33_54445-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54445-T1
Unique NameCAN33_54445-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2833009..2834079-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54445-T1 ID=CAN33_54445-T1|Name=CAN33_54445-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1071bp|location=Sequence derived from alignment at NKJJ01000020.1:2833009..2834079- (Aspergillus niger FDAARGOS_311)
ATGGACGACGCCCATCCAAAGCTCCACCTCTACTCTCTTCCCAACGAAGT
GCGACAACGCGATCTCCAACGGTTGTCAAGATGTCTCGCTAATGCTTGTA
TGGCTCTTCCAGGTTCTCGGTCAGATTCTATCCTCTTTCTCGACGCGCTC
CCTCATCTCTTGGGCGACAGTTTCTCACCGCTTCTACGCCCTCGTCCTAC
GGATCCTACATTATCGCCTACTCATCGGCGCTCCACTGCATGAATACAAA
CTCATCCTAGAATGCTTTCATCCAAACTCAAAGCTAACCGAACCTCATGT
ATTCTGCACATACCTTGACACCGACGGTTTAGATTGGCTCTCCGGGCGGG
GTGGTTCGCTTTATGAGAATCCCGACACGACCCAGCAACTTGGGAAACTG
AGTTCGGTGTATTCTCGGTTCCGTCCTGAAGTCGTGGTAGAAGAAAGATT
TAGCGGAACAAGGCTAGTTCCCCTAAGAGGTATGTATCCCTGTTCCCGGA
CACAGTGGTCACGGCCCCGAAGTCTCTGACTTTGGCAGACGATGAGCAAG
AATCCGATCGGGACAACTTGGTTGTCACGCGCCCTATAATCCTCAAGGAC
TCTGAAGACTTCTCTCAGCTATGTATGGTTGTGAACATTGTGAAGGTCAT
GCCGGGTACGAATCTGCTTCTAAGTGCACACACGGTTGAGGACGGGGTAA
TCAGGGTTTTCCGCGACTGGCTGAGGGACGAAGAGAAGCGCTTCCGGGAT
ATTGTACCTGATGGTACAGGGCCTTCGCAAATGCTATGGGTCGATCAGAG
CAAGGGTGTCGGCATCAAAGTGCGGGTCAAGGCGAAACCGCTTATGAACC
AAAATGTGCCAATTCTCGTCCATCGCGACGACGACGAATTCACGAGCTAT
GAATTGTTAATCGAAGGTATGATGATCCCTTCTCCTATTTTAACTATATA
CACTAACAGATGACTAGAATTACATATACGCGCTGTTCGCTTACTATTGA
CTTTGGAAAAATCGCAGGAGGAACAGCAGAACTATTATAAAGCTGTAGTT
ATAACCCCCACCCTTGGATAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2833009..2834079-

>CAN33_54445-T1 ID=CAN33_54445-T1|Name=CAN33_54445-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3588bp|location=Sequence derived from alignment at NKJJ01000020.1:2833009..2834079- (Aspergillus niger FDAARGOS_311)
AATTACATATACGCGCTGTTCGCTTACTATTGACTTTGGAAAAATCGCAG
GAGGAACAGCAGAACTATTATAAAGCTGTAGTTATAACCCCCACCCTTGG
ATAGACGATGAGCAAGAATCCGATCGGGACAACTTGGTTGTCACGCGCCC
TATAATCCTCAAGGACTCTGAAGACTTCTCTCAGCTATGTATGGTTGTGA
ACATTGTGAAGGTCATGCCGGGTACGAATCTGCTTCTAAGTGCACACACG
GTTGAGGACGGGGTAATCAGGGTTTTCCGCGACTGGCTGAGGGACGAAGA
GAAGCGCTTCCGGGATATTGTACCTGATGGTACAGGGCCTTCGCAAATGC
TATGGGTCGATCAGAGCAAGGGTGTCGGCATCAAAGTGCGGGTCAAGGCG
AAACCGCTTATGAACCAAAATGTGCCAATTCTCGTCCATCGCGACGACGA
CGAATTCACGAGCTATGAATTGTTAATCGAAGGTTCTCGGTCAGATTCTA
TCCTCTTTCTCGACGCGCTCCCTCATCTCTTGGGCGACAGTTTCTCACCG
CTTCTACGCCCTCGTCCTACGGATCCTACATTATCGCCTACTCATCGGCG
CTCCACTGCATGAATACAAACTCATCCTAGAATGCTTTCATCCAAACTCA
AAGCTAACCGAACCTCATGTATTCTGCACATACCTTGACACCGACGGTTT
AGATTGGCTCTCCGGGCGGGGTGGTTCGCTTTATGAGAATCCCGACACGA
CCCAGCAACTTGGGAAACTGAGTTCGGTGTATTCTCGGTTCCGTCCTGAA
GTCGTGGTAGAAGAAAGATTTAGCGGAACAAGGCTAGTTCCCCTAAGAGA
TGGACGACGCCCATCCAAAGCTCCACCTCTACTCTCTTCCCAACGAAAAT
TACATATACGCGCTGTTCGCTTACTATTGACTTTGGAAAAATCGCAGGAG
GAACAGCAGAACTATTATAAAGCTGTAGTTATAACCCCCACCCTTGGATA
GACGATGAGCAAGAATCCGATCGGGACAACTTGGTTGTCACGCGCCCTAT
AATCCTCAAGGACTCTGAAGACTTCTCTCAGCTATGTATGGTTGTGAACA
TTGTGAAGGTCATGCCGGGTACGAATCTGCTTCTAAGTGCACACACGGTT
GAGGACGGGGTAATCAGGGTTTTCCGCGACTGGCTGAGGGACGAAGAGAA
GCGCTTCCGGGATATTGTACCTGATGGTACAGGGCCTTCGCAAATGCTAT
GGGTCGATCAGAGCAAGGGTGTCGGCATCAAAGTGCGGGTCAAGGCGAAA
CCGCTTATGAACCAAAATGTGCCAATTCTCGTCCATCGCGACGACGACGA
ATTCACGAGCTATGAATTGTTAATCGAAGGTTCTCGGTCAGATTCTATCC
TCTTTCTCGACGCGCTCCCTCATCTCTTGGGCGACAGTTTCTCACCGCTT
CTACGCCCTCGTCCTACGGATCCTACATTATCGCCTACTCATCGGCGCTC
CACTGCATGAATACAAACTCATCCTAGAATGCTTTCATCCAAACTCAAAG
CTAACCGAACCTCATGTATTCTGCACATACCTTGACACCGACGGTTTAGA
TTGGCTCTCCGGGCGGGGTGGTTCGCTTTATGAGAATCCCGACACGACCC
AGCAACTTGGGAAACTGAGTTCGGTGTATTCTCGGTTCCGTCCTGAAGTC
GTGGTAGAAGAAAGATTTAGCGGAACAAGGCTAGTTCCCCTAAGAGATGG
ACGACGCCCATCCAAAGCTCCACCTCTACTCTCTTCCCAACGAAAATTAC
ATATACGCGCTGTTCGCTTACTATTGACTTTGGAAAAATCGCAGGAGGAA
CAGCAGAACTATTATAAAGCTGTAGTTATAACCCCCACCCTTGGATAGAC
GATGAGCAAGAATCCGATCGGGACAACTTGGTTGTCACGCGCCCTATAAT
CCTCAAGGACTCTGAAGACTTCTCTCAGCTATGTATGGTTGTGAACATTG
TGAAGGTCATGCCGGGTACGAATCTGCTTCTAAGTGCACACACGGTTGAG
GACGGGGTAATCAGGGTTTTCCGCGACTGGCTGAGGGACGAAGAGAAGCG
CTTCCGGGATATTGTACCTGATGGTACAGGGCCTTCGCAAATGCTATGGG
TCGATCAGAGCAAGGGTGTCGGCATCAAAGTGCGGGTCAAGGCGAAACCG
CTTATGAACCAAAATGTGCCAATTCTCGTCCATCGCGACGACGACGAATT
CACGAGCTATGAATTGTTAATCGAAGGTTCTCGGTCAGATTCTATCCTCT
TTCTCGACGCGCTCCCTCATCTCTTGGGCGACAGTTTCTCACCGCTTCTA
CGCCCTCGTCCTACGGATCCTACATTATCGCCTACTCATCGGCGCTCCAC
TGCATGAATACAAACTCATCCTAGAATGCTTTCATCCAAACTCAAAGCTA
ACCGAACCTCATGTATTCTGCACATACCTTGACACCGACGGTTTAGATTG
GCTCTCCGGGCGGGGTGGTTCGCTTTATGAGAATCCCGACACGACCCAGC
AACTTGGGAAACTGAGTTCGGTGTATTCTCGGTTCCGTCCTGAAGTCGTG
GTAGAAGAAAGATTTAGCGGAACAAGGCTAGTTCCCCTAAGAGATGGACG
ACGCCCATCCAAAGCTCCACCTCTACTCTCTTCCCAACGAAAATTACATA
TACGCGCTGTTCGCTTACTATTGACTTTGGAAAAATCGCAGGAGGAACAG
CAGAACTATTATAAAGCTGTAGTTATAACCCCCACCCTTGGATAGACGAT
GAGCAAGAATCCGATCGGGACAACTTGGTTGTCACGCGCCCTATAATCCT
CAAGGACTCTGAAGACTTCTCTCAGCTATGTATGGTTGTGAACATTGTGA
AGGTCATGCCGGGTACGAATCTGCTTCTAAGTGCACACACGGTTGAGGAC
GGGGTAATCAGGGTTTTCCGCGACTGGCTGAGGGACGAAGAGAAGCGCTT
CCGGGATATTGTACCTGATGGTACAGGGCCTTCGCAAATGCTATGGGTCG
ATCAGAGCAAGGGTGTCGGCATCAAAGTGCGGGTCAAGGCGAAACCGCTT
ATGAACCAAAATGTGCCAATTCTCGTCCATCGCGACGACGACGAATTCAC
GAGCTATGAATTGTTAATCGAAGGTTCTCGGTCAGATTCTATCCTCTTTC
TCGACGCGCTCCCTCATCTCTTGGGCGACAGTTTCTCACCGCTTCTACGC
CCTCGTCCTACGGATCCTACATTATCGCCTACTCATCGGCGCTCCACTGC
ATGAATACAAACTCATCCTAGAATGCTTTCATCCAAACTCAAAGCTAACC
GAACCTCATGTATTCTGCACATACCTTGACACCGACGGTTTAGATTGGCT
CTCCGGGCGGGGTGGTTCGCTTTATGAGAATCCCGACACGACCCAGCAAC
TTGGGAAACTGAGTTCGGTGTATTCTCGGTTCCGTCCTGAAGTCGTGGTA
GAAGAAAGATTTAGCGGAACAAGGCTAGTTCCCCTAAGAGATGGACGACG
CCCATCCAAAGCTCCACCTCTACTCTCTTCCCAACGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54445CAN33_54445Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54445-T1CAN33_54445-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54445-T1.cdsCAN33_54445-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54445-T1.exon4CAN33_54445-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_54445-T1.exon3CAN33_54445-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_54445-T1.exon2CAN33_54445-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54445-T1.exon1CAN33_54445-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
ProductF-box-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2833009..2834079 -
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