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CAN33_54490-T1, CAN33_54490-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54490-T1
Unique NameCAN33_54490-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2857416..2858653-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54490-T1 ID=CAN33_54490-T1|Name=CAN33_54490-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1238bp|location=Sequence derived from alignment at NKJJ01000020.1:2857416..2858653- (Aspergillus niger FDAARGOS_311)
ATGGATAAGTTCCAGGCGTTCGGAAAGAACCTCAGGTGAGATACTGTTCC
CCTCCGCAATAATTTCTCCGATTAGGAGACTGTCCGCATCTCCAGCGGCA
CTCCGATGTTGTCATACAGCCAAGACTTCAACCCAAGCATCTATACTAAC
ATGCTATGTCTTATCGAATAGCGCGAGCTTCTCGCCCTTTGCTGCGCGCA
CTCAGCAGATGATCAAGGAGCAGCTCGGCCAGGCCGACGACCGGACTCAA
CTTCCCGATGAGTACATCGAGCTGGAGAAGCGGGTGGATGCCCTGAAGAT
TGTCCACCAGAAGCTCCTTCAAGTGACGTGCGTAATATTTCCCCCCGTAA
CCTCTCATCTCTCAGTCACCTAACATGTTGGCCCTATCACATGCAGTTCC
CAATACTCCAACGAGGCGTATGACTACCCGCCCAACATTCGCGAATCCTT
CAACGACATGGGCCGCACCATCAGCGAGAAGGTCCAGCTCCTTTCCCAGG
CCTCCTCTCCCGCCGAGGCTCAGGCTGCCCTGACTGCCCCTCCCTCGGCC
AAGCCGCAGCCCAAGACCTTTAACCACGCTATTGCCCGCGCCTCTCTGGC
AGGTTCCCAGACTCTGGCGCAGAGCTCGCACGGTGAGGACCCTCTGGCCA
CTGCGCTGGAGAAGTACGCTTTGGCATCGGAGAAGGTGGGCGAGGCCCGT
CTGGCCCAGGATGCTCAGATCCAATCTCGCTTCTTGGCTGGCTGGAACAC
CACTCTTAACACGAACTTGATGTTCGCGGCGAAGGCACGTAAGAACGTCG
AGAACGCTCGTCTTATGCTCGACTCGATCAAGGCAAGCAAGAAGGCCGCA
GTCAGGGGTGACTGGGACAGCCTGAGCGAGGAGGCTCGTGCGGAGATTGA
GCAGGCGGAGGATGAGTTCGTCGGACAGACCGAGGAGGCTGTGAGCGTGA
TGAAGAACGTACGTTGCTTCGTCTGCGTGGAAGAAAGTGTAAAGACTGAC
AGGATTTTTCAGGTCCTCGATACCCCGGAACCTCTGCGGAACCTGGCCGA
CTTGATCGCGGCGCAGCTAGAGTACCACAAGCGGTCTTACGAGATACTCA
GCGAGCTGGCTCCTGTTGTCGATGGCTTGCAGGTTGAGCAAGAGGTATGA
TCGATCAATATTCACAGGTGGTGTTTCATCGTGACTAATTGGCATCTTCC
TGCAGGCCAGCTACCGTAAGAGCCGTGAGGGCGCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2857416..2858653-

>CAN33_54490-T1 ID=CAN33_54490-T1|Name=CAN33_54490-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4590bp|location=Sequence derived from alignment at NKJJ01000020.1:2857416..2858653- (Aspergillus niger FDAARGOS_311)
GCCAGCTACCGTAAGAGCCGTGAGGGCGCTTAAGTCCTCGATACCCCGGA
ACCTCTGCGGAACCTGGCCGACTTGATCGCGGCGCAGCTAGAGTACCACA
AGCGGTCTTACGAGATACTCAGCGAGCTGGCTCCTGTTGTCGATGGCTTG
CAGGTTGAGCAAGAGTTCCCAATACTCCAACGAGGCGTATGACTACCCGC
CCAACATTCGCGAATCCTTCAACGACATGGGCCGCACCATCAGCGAGAAG
GTCCAGCTCCTTTCCCAGGCCTCCTCTCCCGCCGAGGCTCAGGCTGCCCT
GACTGCCCCTCCCTCGGCCAAGCCGCAGCCCAAGACCTTTAACCACGCTA
TTGCCCGCGCCTCTCTGGCAGGTTCCCAGACTCTGGCGCAGAGCTCGCAC
GGTGAGGACCCTCTGGCCACTGCGCTGGAGAAGTACGCTTTGGCATCGGA
GAAGGTGGGCGAGGCCCGTCTGGCCCAGGATGCTCAGATCCAATCTCGCT
TCTTGGCTGGCTGGAACACCACTCTTAACACGAACTTGATGTTCGCGGCG
AAGGCACGTAAGAACGTCGAGAACGCTCGTCTTATGCTCGACTCGATCAA
GGCAAGCAAGAAGGCCGCAGTCAGGGGTGACTGGGACAGCCTGAGCGAGG
AGGCTCGTGCGGAGATTGAGCAGGCGGAGGATGAGTTCGTCGGACAGACC
GAGGAGGCTGTGAGCGTGATGAAGAACCGCGAGCTTCTCGCCCTTTGCTG
CGCGCACTCAGCAGATGATCAAGGAGCAGCTCGGCCAGGCCGACGACCGG
ACTCAACTTCCCGATGAGTACATCGAGCTGGAGAAGCGGGTGGATGCCCT
GAAGATTGTCCACCAGAAGCTCCTTCAAGTGACATGGATAAGTTCCAGGC
GTTCGGAAAGAACCTCAGGCCAGCTACCGTAAGAGCCGTGAGGGCGCTTA
AGTCCTCGATACCCCGGAACCTCTGCGGAACCTGGCCGACTTGATCGCGG
CGCAGCTAGAGTACCACAAGCGGTCTTACGAGATACTCAGCGAGCTGGCT
CCTGTTGTCGATGGCTTGCAGGTTGAGCAAGAGTTCCCAATACTCCAACG
AGGCGTATGACTACCCGCCCAACATTCGCGAATCCTTCAACGACATGGGC
CGCACCATCAGCGAGAAGGTCCAGCTCCTTTCCCAGGCCTCCTCTCCCGC
CGAGGCTCAGGCTGCCCTGACTGCCCCTCCCTCGGCCAAGCCGCAGCCCA
AGACCTTTAACCACGCTATTGCCCGCGCCTCTCTGGCAGGTTCCCAGACT
CTGGCGCAGAGCTCGCACGGTGAGGACCCTCTGGCCACTGCGCTGGAGAA
GTACGCTTTGGCATCGGAGAAGGTGGGCGAGGCCCGTCTGGCCCAGGATG
CTCAGATCCAATCTCGCTTCTTGGCTGGCTGGAACACCACTCTTAACACG
AACTTGATGTTCGCGGCGAAGGCACGTAAGAACGTCGAGAACGCTCGTCT
TATGCTCGACTCGATCAAGGCAAGCAAGAAGGCCGCAGTCAGGGGTGACT
GGGACAGCCTGAGCGAGGAGGCTCGTGCGGAGATTGAGCAGGCGGAGGAT
GAGTTCGTCGGACAGACCGAGGAGGCTGTGAGCGTGATGAAGAACCGCGA
GCTTCTCGCCCTTTGCTGCGCGCACTCAGCAGATGATCAAGGAGCAGCTC
GGCCAGGCCGACGACCGGACTCAACTTCCCGATGAGTACATCGAGCTGGA
GAAGCGGGTGGATGCCCTGAAGATTGTCCACCAGAAGCTCCTTCAAGTGA
CATGGATAAGTTCCAGGCGTTCGGAAAGAACCTCAGGCCAGCTACCGTAA
GAGCCGTGAGGGCGCTTAAGTCCTCGATACCCCGGAACCTCTGCGGAACC
TGGCCGACTTGATCGCGGCGCAGCTAGAGTACCACAAGCGGTCTTACGAG
ATACTCAGCGAGCTGGCTCCTGTTGTCGATGGCTTGCAGGTTGAGCAAGA
GTTCCCAATACTCCAACGAGGCGTATGACTACCCGCCCAACATTCGCGAA
TCCTTCAACGACATGGGCCGCACCATCAGCGAGAAGGTCCAGCTCCTTTC
CCAGGCCTCCTCTCCCGCCGAGGCTCAGGCTGCCCTGACTGCCCCTCCCT
CGGCCAAGCCGCAGCCCAAGACCTTTAACCACGCTATTGCCCGCGCCTCT
CTGGCAGGTTCCCAGACTCTGGCGCAGAGCTCGCACGGTGAGGACCCTCT
GGCCACTGCGCTGGAGAAGTACGCTTTGGCATCGGAGAAGGTGGGCGAGG
CCCGTCTGGCCCAGGATGCTCAGATCCAATCTCGCTTCTTGGCTGGCTGG
AACACCACTCTTAACACGAACTTGATGTTCGCGGCGAAGGCACGTAAGAA
CGTCGAGAACGCTCGTCTTATGCTCGACTCGATCAAGGCAAGCAAGAAGG
CCGCAGTCAGGGGTGACTGGGACAGCCTGAGCGAGGAGGCTCGTGCGGAG
ATTGAGCAGGCGGAGGATGAGTTCGTCGGACAGACCGAGGAGGCTGTGAG
CGTGATGAAGAACCGCGAGCTTCTCGCCCTTTGCTGCGCGCACTCAGCAG
ATGATCAAGGAGCAGCTCGGCCAGGCCGACGACCGGACTCAACTTCCCGA
TGAGTACATCGAGCTGGAGAAGCGGGTGGATGCCCTGAAGATTGTCCACC
AGAAGCTCCTTCAAGTGACATGGATAAGTTCCAGGCGTTCGGAAAGAACC
TCAGGCCAGCTACCGTAAGAGCCGTGAGGGCGCTTAAGTCCTCGATACCC
CGGAACCTCTGCGGAACCTGGCCGACTTGATCGCGGCGCAGCTAGAGTAC
CACAAGCGGTCTTACGAGATACTCAGCGAGCTGGCTCCTGTTGTCGATGG
CTTGCAGGTTGAGCAAGAGTTCCCAATACTCCAACGAGGCGTATGACTAC
CCGCCCAACATTCGCGAATCCTTCAACGACATGGGCCGCACCATCAGCGA
GAAGGTCCAGCTCCTTTCCCAGGCCTCCTCTCCCGCCGAGGCTCAGGCTG
CCCTGACTGCCCCTCCCTCGGCCAAGCCGCAGCCCAAGACCTTTAACCAC
GCTATTGCCCGCGCCTCTCTGGCAGGTTCCCAGACTCTGGCGCAGAGCTC
GCACGGTGAGGACCCTCTGGCCACTGCGCTGGAGAAGTACGCTTTGGCAT
CGGAGAAGGTGGGCGAGGCCCGTCTGGCCCAGGATGCTCAGATCCAATCT
CGCTTCTTGGCTGGCTGGAACACCACTCTTAACACGAACTTGATGTTCGC
GGCGAAGGCACGTAAGAACGTCGAGAACGCTCGTCTTATGCTCGACTCGA
TCAAGGCAAGCAAGAAGGCCGCAGTCAGGGGTGACTGGGACAGCCTGAGC
GAGGAGGCTCGTGCGGAGATTGAGCAGGCGGAGGATGAGTTCGTCGGACA
GACCGAGGAGGCTGTGAGCGTGATGAAGAACCGCGAGCTTCTCGCCCTTT
GCTGCGCGCACTCAGCAGATGATCAAGGAGCAGCTCGGCCAGGCCGACGA
CCGGACTCAACTTCCCGATGAGTACATCGAGCTGGAGAAGCGGGTGGATG
CCCTGAAGATTGTCCACCAGAAGCTCCTTCAAGTGACATGGATAAGTTCC
AGGCGTTCGGAAAGAACCTCAGGCCAGCTACCGTAAGAGCCGTGAGGGCG
CTTAAGTCCTCGATACCCCGGAACCTCTGCGGAACCTGGCCGACTTGATC
GCGGCGCAGCTAGAGTACCACAAGCGGTCTTACGAGATACTCAGCGAGCT
GGCTCCTGTTGTCGATGGCTTGCAGGTTGAGCAAGAGTTCCCAATACTCC
AACGAGGCGTATGACTACCCGCCCAACATTCGCGAATCCTTCAACGACAT
GGGCCGCACCATCAGCGAGAAGGTCCAGCTCCTTTCCCAGGCCTCCTCTC
CCGCCGAGGCTCAGGCTGCCCTGACTGCCCCTCCCTCGGCCAAGCCGCAG
CCCAAGACCTTTAACCACGCTATTGCCCGCGCCTCTCTGGCAGGTTCCCA
GACTCTGGCGCAGAGCTCGCACGGTGAGGACCCTCTGGCCACTGCGCTGG
AGAAGTACGCTTTGGCATCGGAGAAGGTGGGCGAGGCCCGTCTGGCCCAG
GATGCTCAGATCCAATCTCGCTTCTTGGCTGGCTGGAACACCACTCTTAA
CACGAACTTGATGTTCGCGGCGAAGGCACGTAAGAACGTCGAGAACGCTC
GTCTTATGCTCGACTCGATCAAGGCAAGCAAGAAGGCCGCAGTCAGGGGT
GACTGGGACAGCCTGAGCGAGGAGGCTCGTGCGGAGATTGAGCAGGCGGA
GGATGAGTTCGTCGGACAGACCGAGGAGGCTGTGAGCGTGATGAAGAACC
GCGAGCTTCTCGCCCTTTGCTGCGCGCACTCAGCAGATGATCAAGGAGCA
GCTCGGCCAGGCCGACGACCGGACTCAACTTCCCGATGAGTACATCGAGC
TGGAGAAGCGGGTGGATGCCCTGAAGATTGTCCACCAGAAGCTCCTTCAA
GTGACATGGATAAGTTCCAGGCGTTCGGAAAGAACCTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54490CAN33_54490Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54490-T1CAN33_54490-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54490-T1.cdsCAN33_54490-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54490-T1.exon5CAN33_54490-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_54490-T1.exon4CAN33_54490-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_54490-T1.exon3CAN33_54490-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_54490-T1.exon2CAN33_54490-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54490-T1.exon1CAN33_54490-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR018859
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR004148
DBxrefPFAM:PF10455
DBxrefPFAM:PF03114
ProductBin/amphiphysin/Rvs domain for vesicular trafficking family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2857416..2858653 -
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