You are here

Home

CAN33_54495-T1, CAN33_54495-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54495-T1
Unique NameCAN33_54495-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2859297..2860790-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54495-T1 ID=CAN33_54495-T1|Name=CAN33_54495-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1494bp|location=Sequence derived from alignment at NKJJ01000020.1:2859297..2860790- (Aspergillus niger FDAARGOS_311)
ATGTCTCGATACGGCGACTACCGTCGCTCTACTGGGGCTCTCGACGAGGA
CCACTATTCGCGGGAACGTGAGCGTCACCGTCACCGTCACCGTTCACGTG
GACCCCCGGTACTCGAGCGCCCCCGTCGTGTCGAAGAGGATGATCGCTTC
GAATATCGCCTTCAGGAACAGGAGCGATACGGTCCCCCTGCCCGTCGCTC
CGAAATATTCTACGAGGATGAGCATCTAGCCTACTCCCCAGGTCCGCTGG
TCACCTACCGCCATGCCGAGAGCCCTCCCCCGCGCCCGCGCCTTCTGCGC
CGGCAGTCTTCCCTGGACACTTTTGACCGCCCAACACGCAAGATCGATGA
ATATTACTATAGCGACTACCCGCCTAGAGCTCCTCCTAGTCCCCCGCCAA
TGCGAAGACGGGGCTCTTTCCACCGTGTCCGTTCGCCCGACTACTACGAG
GAAATCCGAATTGCGGAACCAGACTACTATGGCGACGAAGAGTACCGGGA
GTTCCGTGAGCGGGATCGGATTGTCGAGCGCCCACGTCGCTCAGTGAGTC
GGTTTCGTGAGAGAATGGTAGAGGAAGTCGACGTGGAGAAACCGTATCCT
CGGAAAGGCAAAACTCGTATGCCTCGCAAACTGGTTCACACCAGCGCGAT
CCGCGAATTTGGCTATCCGTATGAGGAAGAGGTGTGTATATTCATGGATA
CAAAGTCGAGCTGGAATGAAACATGGCCTGGGCCTTGTCCAACGCTGACC
GTGGCTGCAGGGAAAAATGATCATCATCCAGGTTGCTCTTTCCAAGGAGC
AGATCGACGAGGTCATCAGTCGAAGTCGTGAGATGAAGCGCATGACCGAG
AGTAGGTTCTTCACGTGCTTGCCATCAAGAGAGCAATGGTGCTGACAGTC
TGGAAGCACGTTATAAGCATACTTCCTCACCCTCACCCGTCCGTGACAGA
CAGCGCGACCGCATAGTGGAACGAATCGCTATGGAGAGTTACACCCCCGC
ACGAGCCATGAGACTTTGCTCATCGAGCCATCTCCATCCCGGCACCGGTC
GCGGTCGCGCCATCACCATCATCACCACCACCATGGCGAGCTGGAGGAAA
AGAAAATAACCAGGACGGTCTCTCGGACACGAAACGTGTCGGTCCAGGGT
CGCCCTCGCCGTCGGTCATCGCCCGTGCGTAGAATTGAGCGGTATGACGA
TGGAGCGCAGTCCACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTAC
GCCCGCGAGACAGCGATGACGATCTGCGGGAATACACGCAAATCGAGCGA
CGTGGCGGTGGAGAGATGATCCGGGACACGGAGATTATTGGCGACGGCGA
AGAAGAGGAGATCCTCGAGGTGAAAAAGGATCGCAGAGGTAGGATGAGCC
TTGTCCGACGCAAGCGGTGAAGTGCGGATTCTAAGTGATATTCATAGGCC
CGAGCTCACGGCTCATGCGAGCGATGATGGCGACGTTGACTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:2859297..2860790-

>CAN33_54495-T1 ID=CAN33_54495-T1|Name=CAN33_54495-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5745bp|location=Sequence derived from alignment at NKJJ01000020.1:2859297..2860790- (Aspergillus niger FDAARGOS_311)
GCCCGAGCTCACGGCTCATGCGAGCGATGATGGCGACGTTGACTTGACGC
AGTCCACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTACGCCCGCGA
GACAGCGATGACGATCTGCGGGAATACACGCAAATCGAGCGACGTGGCGG
TGGAGAGATGATCCGGGACACGGAGATTATTGGCGACGGCGAAGAAGAGG
AGATCCTCGAGGTGAAAAAGGATCGCAGAGCACGTTATAAGCATACTTCC
TCACCCTCACCCGTCCGTGACAGACAGCGCGACCGCATAGTGGAACGAAT
CGCTATGGAGAGTTACACCCCCGCACGAGCCATGAGACTTTGCTCATCGA
GCCATCTCCATCCCGGCACCGGTCGCGGGAAAAATGATCATCATCCAGGT
TGCTCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAAGTCGTGAGA
TGAAGCGCATGACCGAGAATGTCTCGATACGGCGACTACCGTCGCTCTAC
TGGGGCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGCGTCACCGTC
ACCGTCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCCCGTCGTGTC
GAAGAGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGAGCGATACGG
TCCCCCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGCATCTAGCCT
ACTCCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGCCCTCCCCCG
CGCCCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTTTGACCGCCC
AACACGCAAGATCGATGAATATTACTATAGCGACTACCCGCCTAGAGCTC
CTCCTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCACCGTGTCCGT
TCGCCCGACTACTACGAGGAAATCCGAATTGCGGAACCAGACTACTATGG
CGACGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTGTCGAGCGCC
CACGTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAGGAAGTCGAC
GTGGAGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCCTCGCAAACT
GGTTCACACCAGCGCGATCCGCGAATTTGGCTATCCGTATGAGGAAGAGG
CCCGAGCTCACGGCTCATGCGAGCGATGATGGCGACGTTGACTTGACGCA
GTCCACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTACGCCCGCGAG
ACAGCGATGACGATCTGCGGGAATACACGCAAATCGAGCGACGTGGCGGT
GGAGAGATGATCCGGGACACGGAGATTATTGGCGACGGCGAAGAAGAGGA
GATCCTCGAGGTGAAAAAGGATCGCAGAGCACGTTATAAGCATACTTCCT
CACCCTCACCCGTCCGTGACAGACAGCGCGACCGCATAGTGGAACGAATC
GCTATGGAGAGTTACACCCCCGCACGAGCCATGAGACTTTGCTCATCGAG
CCATCTCCATCCCGGCACCGGTCGCGGGAAAAATGATCATCATCCAGGTT
GCTCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAAGTCGTGAGAT
GAAGCGCATGACCGAGAATGTCTCGATACGGCGACTACCGTCGCTCTACT
GGGGCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGCGTCACCGTCA
CCGTCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCCCGTCGTGTCG
AAGAGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGAGCGATACGGT
CCCCCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGCATCTAGCCTA
CTCCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGCCCTCCCCCGC
GCCCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTTTGACCGCCCA
ACACGCAAGATCGATGAATATTACTATAGCGACTACCCGCCTAGAGCTCC
TCCTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCACCGTGTCCGTT
CGCCCGACTACTACGAGGAAATCCGAATTGCGGAACCAGACTACTATGGC
GACGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTGTCGAGCGCCC
ACGTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAGGAAGTCGACG
TGGAGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCCTCGCAAACTG
GTTCACACCAGCGCGATCCGCGAATTTGGCTATCCGTATGAGGAAGAGGC
CCGAGCTCACGGCTCATGCGAGCGATGATGGCGACGTTGACTTGACGCAG
TCCACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTACGCCCGCGAGA
CAGCGATGACGATCTGCGGGAATACACGCAAATCGAGCGACGTGGCGGTG
GAGAGATGATCCGGGACACGGAGATTATTGGCGACGGCGAAGAAGAGGAG
ATCCTCGAGGTGAAAAAGGATCGCAGAGCACGTTATAAGCATACTTCCTC
ACCCTCACCCGTCCGTGACAGACAGCGCGACCGCATAGTGGAACGAATCG
CTATGGAGAGTTACACCCCCGCACGAGCCATGAGACTTTGCTCATCGAGC
CATCTCCATCCCGGCACCGGTCGCGGGAAAAATGATCATCATCCAGGTTG
CTCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAAGTCGTGAGATG
AAGCGCATGACCGAGAATGTCTCGATACGGCGACTACCGTCGCTCTACTG
GGGCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGCGTCACCGTCAC
CGTCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCCCGTCGTGTCGA
AGAGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGAGCGATACGGTC
CCCCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGCATCTAGCCTAC
TCCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGCCCTCCCCCGCG
CCCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTTTGACCGCCCAA
CACGCAAGATCGATGAATATTACTATAGCGACTACCCGCCTAGAGCTCCT
CCTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCACCGTGTCCGTTC
GCCCGACTACTACGAGGAAATCCGAATTGCGGAACCAGACTACTATGGCG
ACGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTGTCGAGCGCCCA
CGTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAGGAAGTCGACGT
GGAGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCCTCGCAAACTGG
TTCACACCAGCGCGATCCGCGAATTTGGCTATCCGTATGAGGAAGAGGCC
CGAGCTCACGGCTCATGCGAGCGATGATGGCGACGTTGACTTGACGCAGT
CCACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTACGCCCGCGAGAC
AGCGATGACGATCTGCGGGAATACACGCAAATCGAGCGACGTGGCGGTGG
AGAGATGATCCGGGACACGGAGATTATTGGCGACGGCGAAGAAGAGGAGA
TCCTCGAGGTGAAAAAGGATCGCAGAGCACGTTATAAGCATACTTCCTCA
CCCTCACCCGTCCGTGACAGACAGCGCGACCGCATAGTGGAACGAATCGC
TATGGAGAGTTACACCCCCGCACGAGCCATGAGACTTTGCTCATCGAGCC
ATCTCCATCCCGGCACCGGTCGCGGGAAAAATGATCATCATCCAGGTTGC
TCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAAGTCGTGAGATGA
AGCGCATGACCGAGAATGTCTCGATACGGCGACTACCGTCGCTCTACTGG
GGCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGCGTCACCGTCACC
GTCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCCCGTCGTGTCGAA
GAGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGAGCGATACGGTCC
CCCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGCATCTAGCCTACT
CCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGCCCTCCCCCGCGC
CCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTTTGACCGCCCAAC
ACGCAAGATCGATGAATATTACTATAGCGACTACCCGCCTAGAGCTCCTC
CTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCACCGTGTCCGTTCG
CCCGACTACTACGAGGAAATCCGAATTGCGGAACCAGACTACTATGGCGA
CGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTGTCGAGCGCCCAC
GTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAGGAAGTCGACGTG
GAGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCCTCGCAAACTGGT
TCACACCAGCGCGATCCGCGAATTTGGCTATCCGTATGAGGAAGAGGCCC
GAGCTCACGGCTCATGCGAGCGATGATGGCGACGTTGACTTGACGCAGTC
CACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTACGCCCGCGAGACA
GCGATGACGATCTGCGGGAATACACGCAAATCGAGCGACGTGGCGGTGGA
GAGATGATCCGGGACACGGAGATTATTGGCGACGGCGAAGAAGAGGAGAT
CCTCGAGGTGAAAAAGGATCGCAGAGCACGTTATAAGCATACTTCCTCAC
CCTCACCCGTCCGTGACAGACAGCGCGACCGCATAGTGGAACGAATCGCT
ATGGAGAGTTACACCCCCGCACGAGCCATGAGACTTTGCTCATCGAGCCA
TCTCCATCCCGGCACCGGTCGCGGGAAAAATGATCATCATCCAGGTTGCT
CTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAAGTCGTGAGATGAA
GCGCATGACCGAGAATGTCTCGATACGGCGACTACCGTCGCTCTACTGGG
GCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGCGTCACCGTCACCG
TCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCCCGTCGTGTCGAAG
AGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGAGCGATACGGTCCC
CCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGCATCTAGCCTACTC
CCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGCCCTCCCCCGCGCC
CGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTTTGACCGCCCAACA
CGCAAGATCGATGAATATTACTATAGCGACTACCCGCCTAGAGCTCCTCC
TAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCACCGTGTCCGTTCGC
CCGACTACTACGAGGAAATCCGAATTGCGGAACCAGACTACTATGGCGAC
GAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTGTCGAGCGCCCACG
TCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAGGAAGTCGACGTGG
AGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCCTCGCAAACTGGTT
CACACCAGCGCGATCCGCGAATTTGGCTATCCGTATGAGGAAGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_54495CAN33_54495Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54495-T1CAN33_54495-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54495-T1.cdsCAN33_54495-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54495-T1.exon5CAN33_54495-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_54495-T1.exon4CAN33_54495-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_54495-T1.exon3CAN33_54495-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_54495-T1.exon2CAN33_54495-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54495-T1.exon1CAN33_54495-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2859297..2860790 -
Powered by Drupal