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CAN33_54530-T1, CAN33_54530-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54530-T1
Unique NameCAN33_54530-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2883720..2884883+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54530-T1 ID=CAN33_54530-T1|Name=CAN33_54530-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1164bp|location=Sequence derived from alignment at NKJJ01000020.1:2883720..2884883+ (Aspergillus niger FDAARGOS_311)
ATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGA
CAAGTGGAAGGTACGCTATATAACCCAAATCCAAAACATCGAAACACTCG
AACCCGACCGAAACTAACCTGCAAATTTGTTGCGACCAGGTCGAACCCTT
CCAAGCCGAAGACAATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCG
CCACTCTTTTCCCCAAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCC
GTGGTGACAAGAGCGCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTT
GGTCGAGGGTAGCATGACAGTCAAGACGACCCGAAAGACGTTTGATCCTG
CTGCGATTCTCAAGGCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTG
CCGGTGCAACAGGTAAATAACCCTGAATTTATGATTTCTAGGTTACCGAT
AAAGTTACTAACACATTAAAACTAAATAGGCCCTCAAAATCCTCGAAGAC
GACGTCGCATGCGACATCATCAAGATCCGCAACCAAGTCCGCAACAAGGA
GCGCTTCGTTAAGCGTCGTCAACGCATTCTCGGTCCCGGTGGATCCACCC
TGAAAGCCTTGGAGCTGCTCACAAGCACCTACATCCTGGTCCAGGGTAAC
ACGGTCTCCGCCATGGGCCCCTACAAGGGTCTCAAGGAAGTCCGTCGCAT
CATCAACGACTGCATGGCCAACATCCACCCGATCTACCACATTAAGGAAC
TCATGATCAAGCGCGAATTGGCCAAGGACCCGACCCTGGCGAACGAATCC
TGGGACCGCTTCCTGCCTAACTTCAAGAAGCGCACGCTGTCCAAGCGTCG
CGTGCCGTTCAAGGTCACCGACAAGACGAAGAAGGTGTACACTCCTTTCC
CGCCGGCGCCGGAGAAGAGCAAGGTGGATCTCCAGATCGAGTCGGGCGAG
TACTTCCTGTCCAAGGAGGCGAAGGATCGGCAGCAGAAGGAGGAGGTCAT
GGAGAGACAGCGGTTGAAGCGCGAAGAGAAGATGAAGGAGCGCGAGAAGG
CGTTCGTGCCGCCCGAGGAGCTGGACGCAGAGGAGAAGAAGAAGGAAAAG
AAGGAGAAGAAGGAGAAGAAAGAGAAGAAGAAGCGGAAGCGCGATTCCGA
GGCCGCGGATGTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2883720..2884883+

>CAN33_54530-T1 ID=CAN33_54530-T1|Name=CAN33_54530-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3744bp|location=Sequence derived from alignment at NKJJ01000020.1:2883720..2884883+ (Aspergillus niger FDAARGOS_311)
ATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGA
CAAGTGGAAGGTCGAACCCTTCCAAGCCGAAGACAATGTCGCCGGTAGTT
TCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCCAAGTACCGTGAAGTC
TACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGCGCTCGAGAAATTCGG
TATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCATGACAGTCAAGACGA
CCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAGGCCCGTGACTTGATC
AAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGGCCCTCAAAATCCTCGA
AGACGACGTCGCATGCGACATCATCAAGATCCGCAACCAAGTCCGCAACA
AGGAGCGCTTCGTTAAGCGTCGTCAACGCATTCTCGGTCCCGGTGGATCC
ACCCTGAAAGCCTTGGAGCTGCTCACAAGCACCTACATCCTGGTCCAGGG
TAACACGGTCTCCGCCATGGGCCCCTACAAGGGTCTCAAGGAAGTCCGTC
GCATCATCAACGACTGCATGGCCAACATCCACCCGATCTACCACATTAAG
GAACTCATGATCAAGCGCGAATTGGCCAAGGACCCGACCCTGGCGAACGA
ATCCTGGGACCGCTTCCTGCCTAACTTCAAGAAGCGCACGCTGTCCAAGC
GTCGCGTGCCGTTCAAGGTCACCGACAAGACGAAGAAGGTGTACACTCCT
TTCCCGCCGGCGCCGGAGAAGAGCAAGGTGGATCTCCAGATCGAGTCGGG
CGAGTACTTCCTGTCCAAGGAGGCGAAGGATCGGCAGCAGAAGGAGGAGG
TCATGGAGAGACAGCGGTTGAAGCGCGAAGAGAAGATGAAGGAGCGCGAG
AAGGCCGGAAGCGCGATTCCGAGGCCGCGGATGTAGATGCCTTCCACCTA
CAAGAGGGACAAGCCGTGGGACACGGATGACATTGACAAGTGGAAGGTCG
AACCCTTCCAAGCCGAAGACAATGTCGCCGGTAGTTTCGCTGAAGAATCT
TCCTTCGCCACTCTTTTCCCCAAGTACCGTGAAGTCTACCTGAAGGAAGC
ATGGCCCGTGGTGACAAGAGCGCTCGAGAAATTCGGTATTGCCTGCACGC
TGGATTTGGTCGAGGGTAGCATGACAGTCAAGACGACCCGAAAGACGTTT
GATCCTGCTGCGATTCTCAAGGCCCGTGACTTGATCAAGCTGTTGTCGAG
AAGTGTGCCGGTGCAACAGGCCCTCAAAATCCTCGAAGACGACGTCGCAT
GCGACATCATCAAGATCCGCAACCAAGTCCGCAACAAGGAGCGCTTCGTT
AAGCGTCGTCAACGCATTCTCGGTCCCGGTGGATCCACCCTGAAAGCCTT
GGAGCTGCTCACAAGCACCTACATCCTGGTCCAGGGTAACACGGTCTCCG
CCATGGGCCCCTACAAGGGTCTCAAGGAAGTCCGTCGCATCATCAACGAC
TGCATGGCCAACATCCACCCGATCTACCACATTAAGGAACTCATGATCAA
GCGCGAATTGGCCAAGGACCCGACCCTGGCGAACGAATCCTGGGACCGCT
TCCTGCCTAACTTCAAGAAGCGCACGCTGTCCAAGCGTCGCGTGCCGTTC
AAGGTCACCGACAAGACGAAGAAGGTGTACACTCCTTTCCCGCCGGCGCC
GGAGAAGAGCAAGGTGGATCTCCAGATCGAGTCGGGCGAGTACTTCCTGT
CCAAGGAGGCGAAGGATCGGCAGCAGAAGGAGGAGGTCATGGAGAGACAG
CGGTTGAAGCGCGAAGAGAAGATGAAGGAGCGCGAGAAGGCCGGAAGCGC
GATTCCGAGGCCGCGGATGTAGATGCCTTCCACCTACAAGAGGGACAAGC
CGTGGGACACGGATGACATTGACAAGTGGAAGGTCGAACCCTTCCAAGCC
GAAGACAATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCT
TTTCCCCAAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGA
CAAGAGCGCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAG
GGTAGCATGACAGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGAT
TCTCAAGGCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGC
AACAGGCCCTCAAAATCCTCGAAGACGACGTCGCATGCGACATCATCAAG
ATCCGCAACCAAGTCCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCAACG
CATTCTCGGTCCCGGTGGATCCACCCTGAAAGCCTTGGAGCTGCTCACAA
GCACCTACATCCTGGTCCAGGGTAACACGGTCTCCGCCATGGGCCCCTAC
AAGGGTCTCAAGGAAGTCCGTCGCATCATCAACGACTGCATGGCCAACAT
CCACCCGATCTACCACATTAAGGAACTCATGATCAAGCGCGAATTGGCCA
AGGACCCGACCCTGGCGAACGAATCCTGGGACCGCTTCCTGCCTAACTTC
AAGAAGCGCACGCTGTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGACAA
GACGAAGAAGGTGTACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCAAGG
TGGATCTCCAGATCGAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCGAAG
GATCGGCAGCAGAAGGAGGAGGTCATGGAGAGACAGCGGTTGAAGCGCGA
AGAGAAGATGAAGGAGCGCGAGAAGGCCGGAAGCGCGATTCCGAGGCCGC
GGATGTAGATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGAT
GACATTGACAAGTGGAAGGTCGAACCCTTCCAAGCCGAAGACAATGTCGC
CGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCCAAGTACC
GTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGCGCTCGAG
AAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCATGACAGT
CAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAGGCCCGTG
ACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGGCCCTCAAA
ATCCTCGAAGACGACGTCGCATGCGACATCATCAAGATCCGCAACCAAGT
CCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCAACGCATTCTCGGTCCCG
GTGGATCCACCCTGAAAGCCTTGGAGCTGCTCACAAGCACCTACATCCTG
GTCCAGGGTAACACGGTCTCCGCCATGGGCCCCTACAAGGGTCTCAAGGA
AGTCCGTCGCATCATCAACGACTGCATGGCCAACATCCACCCGATCTACC
ACATTAAGGAACTCATGATCAAGCGCGAATTGGCCAAGGACCCGACCCTG
GCGAACGAATCCTGGGACCGCTTCCTGCCTAACTTCAAGAAGCGCACGCT
GTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGACAAGACGAAGAAGGTGT
ACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCAAGGTGGATCTCCAGATC
GAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCGAAGGATCGGCAGCAGAA
GGAGGAGGTCATGGAGAGACAGCGGTTGAAGCGCGAAGAGAAGATGAAGG
AGCGCGAGAAGGCCGGAAGCGCGATTCCGAGGCCGCGGATGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KRR1CAN33_54530Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54530-T1.exon1CAN33_54530-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_54530-T1.exon2CAN33_54530-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54530-T1.exon3CAN33_54530-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_54530-T1.exon4CAN33_54530-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54530-T1.cdsCAN33_54530-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54530-T1CAN33_54530-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263CG4
DBxrefInterPro:IPR041174
DBxrefInterPro:IPR024166
DBxrefInterPro:IPR036612
DBxrefInterPro:IPR004087
DBxrefPFAM:PF17903
Productribosomal RNA assembly protein krr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2883720..2884883 +
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