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CAN33_54555-T1, CAN33_54555-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_54555-T1
Unique NameCAN33_54555-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:2894703..2895372-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_54555-T1 ID=CAN33_54555-T1|Name=CAN33_54555-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=670bp|location=Sequence derived from alignment at NKJJ01000020.1:2894703..2895372- (Aspergillus niger FDAARGOS_311)
ATGGCGGCTCCGGCCGTATCATACAAGGTAATATCCCGAGGTTTCCCCTC
CTCATTGACAGCAGTCACTAACCATATACACCACATCTAGGACCGGCAGT
TCCTTGCGGTCATAGGAGATGAAGAGTGAGCCACACCACTACTACCTGAT
GAGAGAGGCACTTCCGCTGACTGTTTATTTCCAGCTCCGTAACAGGCCTC
CTCCTTGCCGGTGTCGGTGTACGTATCCTCAAAGCACAACAGCCAGATAA
CGACAAACATGCGACCACAACTAACATGATACATTGAAGCATGTCACGGA
TGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAGACTGAGA
CTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAGGAAAGAT
ATCGCCATTGTCCTTATCAACCAGCATGTATGTGTCTTGTTACAACTTCG
CAGTGTCCCTAACCTGCGACGCCTGCGTATTATACAATTATTTGAGTGCT
TTCATACGGCCGCTTACAATTGGATATAGATTGCAGAGCGTATCCGGCAC
AGCGTCGATTCCTACGCCGAGGCTTTCCCTGCCGTTCTCGAGATCCCGAG
CAAGGACCACCCATATGACCCTGAAAAGGATAGTGTACTCAAGCGGGTGC
GACGGCTGTTTGGAGAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:2894703..2895372-

>CAN33_54555-T1 ID=CAN33_54555-T1|Name=CAN33_54555-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1875bp|location=Sequence derived from alignment at NKJJ01000020.1:2894703..2895372- (Aspergillus niger FDAARGOS_311)
ATTGCAGAGCGTATCCGGCACAGCGTCGATTCCTACGCCGAGGCTTTCCC
TGCCGTTCTCGAGATCCCGAGCAAGGACCACCCATATGACCCTGAAAAGG
ATAGTGTACTCAAGCGGGTGCGACGGCTGTTTGGAGAGTAGCATGTCACG
GATGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAGACTGA
GACTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAGGAAAG
ATATCGCCATTGTCCTTATCAACCAGCATCTCCGTAACAGGCCTCCTCCT
TGCCGGTGTCGGTGACCGGCAGTTCCTTGCGGTCATAGGAGATGAAGAAT
GGCGGCTCCGGCCGTATCATACAAGATTGCAGAGCGTATCCGGCACAGCG
TCGATTCCTACGCCGAGGCTTTCCCTGCCGTTCTCGAGATCCCGAGCAAG
GACCACCCATATGACCCTGAAAAGGATAGTGTACTCAAGCGGGTGCGACG
GCTGTTTGGAGAGTAGCATGTCACGGATGGCGCAGATGCCCAGCGAAACT
TCCTTGTGGTAGACTCGAAGACTGAGACTGCCACGATCGAGAAAGCGTTC
CAGAACTTCACTCAGGAGAGGAAAGATATCGCCATTGTCCTTATCAACCA
GCATCTCCGTAACAGGCCTCCTCCTTGCCGGTGTCGGTGACCGGCAGTTC
CTTGCGGTCATAGGAGATGAAGAATGGCGGCTCCGGCCGTATCATACAAG
ATTGCAGAGCGTATCCGGCACAGCGTCGATTCCTACGCCGAGGCTTTCCC
TGCCGTTCTCGAGATCCCGAGCAAGGACCACCCATATGACCCTGAAAAGG
ATAGTGTACTCAAGCGGGTGCGACGGCTGTTTGGAGAGTAGCATGTCACG
GATGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAGACTGA
GACTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAGGAAAG
ATATCGCCATTGTCCTTATCAACCAGCATCTCCGTAACAGGCCTCCTCCT
TGCCGGTGTCGGTGACCGGCAGTTCCTTGCGGTCATAGGAGATGAAGAAT
GGCGGCTCCGGCCGTATCATACAAGATTGCAGAGCGTATCCGGCACAGCG
TCGATTCCTACGCCGAGGCTTTCCCTGCCGTTCTCGAGATCCCGAGCAAG
GACCACCCATATGACCCTGAAAAGGATAGTGTACTCAAGCGGGTGCGACG
GCTGTTTGGAGAGTAGCATGTCACGGATGGCGCAGATGCCCAGCGAAACT
TCCTTGTGGTAGACTCGAAGACTGAGACTGCCACGATCGAGAAAGCGTTC
CAGAACTTCACTCAGGAGAGGAAAGATATCGCCATTGTCCTTATCAACCA
GCATCTCCGTAACAGGCCTCCTCCTTGCCGGTGTCGGTGACCGGCAGTTC
CTTGCGGTCATAGGAGATGAAGAATGGCGGCTCCGGCCGTATCATACAAG
ATTGCAGAGCGTATCCGGCACAGCGTCGATTCCTACGCCGAGGCTTTCCC
TGCCGTTCTCGAGATCCCGAGCAAGGACCACCCATATGACCCTGAAAAGG
ATAGTGTACTCAAGCGGGTGCGACGGCTGTTTGGAGAGTAGCATGTCACG
GATGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAGACTGA
GACTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAGGAAAG
ATATCGCCATTGTCCTTATCAACCAGCATCTCCGTAACAGGCCTCCTCCT
TGCCGGTGTCGGTGACCGGCAGTTCCTTGCGGTCATAGGAGATGAAGAAT
GGCGGCTCCGGCCGTATCATACAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033180proton-transporting V-type ATPase, V1 domain
Vocabulary: Molecular Function
TermDefinition
GO:0046961proton-transporting ATPase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
GO:0034220ion transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA7CAN33_54555Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54555-T1CAN33_54555-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54555-T1.cdsCAN33_54555-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_54555-T1.exon5CAN33_54555-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_54555-T1.exon4CAN33_54555-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_54555-T1.exon3CAN33_54555-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_54555-T1.exon2CAN33_54555-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_54555-T1.exon1CAN33_54555-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09265FI4
DBxrefInterPro:IPR008218
DBxrefInterPro:IPR005772
DBxrefInterPro:IPR036906
DBxrefPFAM:PF01990
ProductH( )-transporting V1 sector ATPase subunit F
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:2894703..2895372 -
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