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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:2920791..2923176- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_54580-T1 ID=CAN33_54580-T1|Name=CAN33_54580-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2386bp|location=Sequence derived from alignment at NKJJ01000020.1:2920791..2923176- (Aspergillus niger FDAARGOS_311)
ATGCCCGGCGCTGATAGGAAACCCAAGACCTTGTATGACAAGGTCCTGGA
CCACCACATTGTCAACGAGCAGGAAGATGGTACTCTTCTGATCTACATTG
ACAGACACCTTGTCCACGAAGTCACATCTCCCCAGGCTTTTGAGGGTCTC
AAGAATGCTGGTCGTAAAGTCCGCCGGCCGGACTGCACCCTGGTGACCGT
TGACCACGTATGTCTTTCATTTCTTTTTCCCCCACATCGAATTTCTGGCA
GCCATCTAACTGACTCAAATGACAGAACATTCCCACCTCCTCCCGCAAAA
ACTTCAAGAACGTCGATGAGTTCATCAAAGAGAACGACTCCCGCCTCCAA
TGCAGCACCCTCGAGGAGAACGTCAAGGACTTCGGTCTCACATACTTTGG
CATGGGCGACAAGCGCCAGGGTATTGTCCACATCATCGGTCCTGAGCAGG
GTTTCACCCTTCCCGGCACAACTGTCGTCTGCGGTGACAGTCACACCTCC
ACACACGGTGCCTTCGGTGCCCTTGCCTTCGGTATCGGTACCAGTGAGGT
CGAGCACGTTCTCGCCACCCAGACCCTCATCACCCGTCGCAGCAAGAACA
TGCGCATCCAGGTCGACGGTGAGCTGCCCGCCGGTGTCACCAGTAAGGAT
GTCGTCCTCCACATCATCGGTGTCATTGGTACCGCCGGAGGTACCGGTGC
CGTTATTGAGTTCTGCGGTTCCGTCATTCGCAGCCTGAGCATGGAGGCCC
GTATGTCCATGTGCAACATGTCCATCGAAGCTGGTGCCCGTGCCGGTATG
ATCGCTCCCGATCAGATCACCTTCGATTACCTGAAGGGTCGCCCTCTTGC
TCCCAAGGTCGACAGCCCCGAATGGACCAGGGCCGTCAACTTCTGGTCCA
GCCTGGCCTCCGACGAAGATGCCGTCTACGACAAGACCGTCATCATCGAT
GGCAAGGACATCATCCCCACCGTCTCCTGGGGTACCTCCCCCAGGACGTC
ATCCCCATCAACGGCGTCGTTCCCGGCCCCGATGACTTCCAGGACGAGAG
CCGCAAGCTTGCCTGCAAGCGCGCTCTCGAATACATGGGCCTGACGGCCG
GCACCCCCATGAAGGACATTACGGTCGACAAGGTTTTCATTGGCTCTTGC
ACCAACGCCCGTATCGAGGATCTCCGCGCCGCCGCCAAGGTTGTTCGCGG
CAAGAAGATCGCCTCCAACATCAAGCGTGCCATGGTCGTCCCCGGCTCTG
GTCTGGTTAAGCAACAAGCCGAGTCTGAAGGCCTCGACAAGATCTTTTCT
GACGCGGGCTTCGAATGGCGTGAGGCCGGCTGCTCCATGTGCCTGGGCAT
GAACCCCGACATTCTCTCTCCCCAGGAACGCTGCGCCAGTACCTCCAACC
GTAACTTCGAGGGTCGCCAAGGTGCCGGCGGTCGCACTCACCTCATGTCC
CCCGCCATGGCCGCCTCCGCCGCCATCGTTGGCAAGCTGGCCGACGTGCG
CGAGCACATCACCACCAGCCCCGTCCTCGGCAAGGTGCAGCCCAAGATCG
ACGTGCAAGAGGAACTGCACGAAGAGCCCACCACTGAAGATGAAGTCGAA
CGCATCATGGACCTCCCCGCCGACAACGAACCCCACACCAACTCCTCCGC
CAGCGCCACCTCCTCCGCTGGCCTGCCCAAATTCACCACCCTGAAGGGTA
TCGCCGCTCCGATGGACCGCTCCAACGTCGACACCGACGCCATCATTCCC
AAGCAGTTCCTCAAGACCATCAAGCGCACCGGTCTTGGCAGCGCCCTGTT
CTACGAGCTCCGCTACAAGGACGGCGCCGAGGACCCCTCTTTCATCCTGA
ACCAAGGCATCTACCGCAACTCGAAGATCCTCGTCGTCACCGGCCCCAAC
TTCGGCTGCGGTAGTTCCCGTGAACACGCCCCCTGGGCCCTCCTCGACTT
CGGCATCAAGTGCATCATCGCCCCCTCCTTCGCCGATATCTTCTTCAACA
ACACCTTCAAGAACGGCATGTTGCCCGTCGTCATCAGCGACGAGGCCGTC
CTGGCCAAGATCGCCGCTGAGGCCCACGCCGGCCGCGAAGTCGAGGTCGA
TCTCGTCAACCAGCAGATCAAGGACGCCGCTGGTAACAAGCTCGCCGACT
TTGATGTCGATGGATTCCGCAAGCACTGCCTGGTCAACGGTCTCGATGAC
ATTGGCCTTACTCTGCAGATGGAGTCCAAGATCAAGAGCTTCGAGAACAA
GAGGACCATTGAGACCCCTTGGTTGGATGGCAGTGGCTACTTGAAGAGAG
GTAACCGCGGCGCTACTATGGTGCAGGCGGCGCCGGTGCCCAAGACGAAC
AGGGGCGACGTTAAGTCGGAGCCTTTGGAGTGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:2920791..2923176- >CAN33_54580-T1 ID=CAN33_54580-T1|Name=CAN33_54580-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6885bp|location=Sequence derived from alignment at NKJJ01000020.1:2920791..2923176- (Aspergillus niger FDAARGOS_311)
GACGTCATCCCCATCAACGGCGTCGTTCCCGGCCCCGATGACTTCCAGGA
CGAGAGCCGCAAGCTTGCCTGCAAGCGCGCTCTCGAATACATGGGCCTGA
CGGCCGGCACCCCCATGAAGGACATTACGGTCGACAAGGTTTTCATTGGC
TCTTGCACCAACGCCCGTATCGAGGATCTCCGCGCCGCCGCCAAGGTTGT
TCGCGGCAAGAAGATCGCCTCCAACATCAAGCGTGCCATGGTCGTCCCCG
GCTCTGGTCTGGTTAAGCAACAAGCCGAGTCTGAAGGCCTCGACAAGATC
TTTTCTGACGCGGGCTTCGAATGGCGTGAGGCCGGCTGCTCCATGTGCCT
GGGCATGAACCCCGACATTCTCTCTCCCCAGGAACGCTGCGCCAGTACCT
CCAACCGTAACTTCGAGGGTCGCCAAGGTGCCGGCGGTCGCACTCACCTC
ATGTCCCCCGCCATGGCCGCCTCCGCCGCCATCGTTGGCAAGCTGGCCGA
CGTGCGCGAGCACATCACCACCAGCCCCGTCCTCGGCAAGGTGCAGCCCA
AGATCGACGTGCAAGAGGAACTGCACGAAGAGCCCACCACTGAAGATGAA
GTCGAACGCATCATGGACCTCCCCGCCGACAACGAACCCCACACCAACTC
CTCCGCCAGCGCCACCTCCTCCGCTGGCCTGCCCAAATTCACCACCCTGA
AGGGTATCGCCGCTCCGATGGACCGCTCCAACGTCGACACCGACGCCATC
ATTCCCAAGCAGTTCCTCAAGACCATCAAGCGCACCGGTCTTGGCAGCGC
CCTGTTCTACGAGCTCCGCTACAAGGACGGCGCCGAGGACCCCTCTTTCA
TCCTGAACCAAGGCATCTACCGCAACTCGAAGATCCTCGTCGTCACCGGC
CCCAACTTCGGCTGCGGTAGTTCCCGTGAACACGCCCCCTGGGCCCTCCT
CGACTTCGGCATCAAGTGCATCATCGCCCCCTCCTTCGCCGATATCTTCT
TCAACAACACCTTCAAGAACGGCATGTTGCCCGTCGTCATCAGCGACGAG
GCCGTCCTGGCCAAGATCGCCGCTGAGGCCCACGCCGGCCGCGAAGTCGA
GGTCGATCTCGTCAACCAGCAGATCAAGGACGCCGCTGGTAACAAGCTCG
CCGACTTTGATGTCGATGGATTCCGCAAGCACTGCCTGGTCAACGGTCTC
GATGACATTGGCCTTACTCTGCAGATGGAGTCCAAGATCAAGAGCTTCGA
GAACAAGAGGACCATTGAGACCCCTTGGTTGGATGGCAGTGGCTACTTGA
AGAGAGGTAACCGCGGCGCTACTATGGTGCAGGCGGCGCCGGTGCCCAAG
ACGAACAGGGGCGACGTTAAGTCGGAGCCTTTGGAGTGGTAGAACATTCC
CACCTCCTCCCGCAAAAACTTCAAGAACGTCGATGAGTTCATCAAAGAGA
ACGACTCCCGCCTCCAATGCAGCACCCTCGAGGAGAACGTCAAGGACTTC
GGTCTCACATACTTTGGCATGGGCGACAAGCGCCAGGGTATTGTCCACAT
CATCGGTCCTGAGCAGGGTTTCACCCTTCCCGGCACAACTGTCGTCTGCG
GTGACAGTCACACCTCCACACACGGTGCCTTCGGTGCCCTTGCCTTCGGT
ATCGGTACCAGTGAGGTCGAGCACGTTCTCGCCACCCAGACCCTCATCAC
CCGTCGCAGCAAGAACATGCGCATCCAGGTCGACGGTGAGCTGCCCGCCG
GTGTCACCAGTAAGGATGTCGTCCTCCACATCATCGGTGTCATTGGTACC
GCCGGAGGTACCGGTGCCGTTATTGAGTTCTGCGGTTCCGTCATTCGCAG
CCTGAGCATGGAGGCCCGTATGTCCATGTGCAACATGTCCATCGAAGCTG
GTGCCCGTGCCGGTATGATCGCTCCCGATCAGATCACCTTCGATTACCTG
AAGGGTCGCCCTCTTGCTCCCAAGGTCGACAGCCCCGAATGGACCAGGGC
CGTCAACTTCTGGTCCAGCCTGGCCTCCGACGAAGATGCCGTCTACGACA
AGACCGTCATCATCGATGGCAAGGACATCATCCCCACCATGCCCGGCGCT
GATAGGAAACCCAAGACCTTGTATGACAAGGTCCTGGACCACCACATTGT
CAACGAGCAGGAAGATGGTACTCTTCTGATCTACATTGACAGACACCTTG
TCCACGAAGTCACATCTCCCCAGGCTTTTGAGGGTCTCAAGAATGCTGGT
CGTAAAGTCCGCCGGCCGGACTGCACCCTGGTGACCGTTGACCACGACGT
CATCCCCATCAACGGCGTCGTTCCCGGCCCCGATGACTTCCAGGACGAGA
GCCGCAAGCTTGCCTGCAAGCGCGCTCTCGAATACATGGGCCTGACGGCC
GGCACCCCCATGAAGGACATTACGGTCGACAAGGTTTTCATTGGCTCTTG
CACCAACGCCCGTATCGAGGATCTCCGCGCCGCCGCCAAGGTTGTTCGCG
GCAAGAAGATCGCCTCCAACATCAAGCGTGCCATGGTCGTCCCCGGCTCT
GGTCTGGTTAAGCAACAAGCCGAGTCTGAAGGCCTCGACAAGATCTTTTC
TGACGCGGGCTTCGAATGGCGTGAGGCCGGCTGCTCCATGTGCCTGGGCA
TGAACCCCGACATTCTCTCTCCCCAGGAACGCTGCGCCAGTACCTCCAAC
CGTAACTTCGAGGGTCGCCAAGGTGCCGGCGGTCGCACTCACCTCATGTC
CCCCGCCATGGCCGCCTCCGCCGCCATCGTTGGCAAGCTGGCCGACGTGC
GCGAGCACATCACCACCAGCCCCGTCCTCGGCAAGGTGCAGCCCAAGATC
GACGTGCAAGAGGAACTGCACGAAGAGCCCACCACTGAAGATGAAGTCGA
ACGCATCATGGACCTCCCCGCCGACAACGAACCCCACACCAACTCCTCCG
CCAGCGCCACCTCCTCCGCTGGCCTGCCCAAATTCACCACCCTGAAGGGT
ATCGCCGCTCCGATGGACCGCTCCAACGTCGACACCGACGCCATCATTCC
CAAGCAGTTCCTCAAGACCATCAAGCGCACCGGTCTTGGCAGCGCCCTGT
TCTACGAGCTCCGCTACAAGGACGGCGCCGAGGACCCCTCTTTCATCCTG
AACCAAGGCATCTACCGCAACTCGAAGATCCTCGTCGTCACCGGCCCCAA
CTTCGGCTGCGGTAGTTCCCGTGAACACGCCCCCTGGGCCCTCCTCGACT
TCGGCATCAAGTGCATCATCGCCCCCTCCTTCGCCGATATCTTCTTCAAC
AACACCTTCAAGAACGGCATGTTGCCCGTCGTCATCAGCGACGAGGCCGT
CCTGGCCAAGATCGCCGCTGAGGCCCACGCCGGCCGCGAAGTCGAGGTCG
ATCTCGTCAACCAGCAGATCAAGGACGCCGCTGGTAACAAGCTCGCCGAC
TTTGATGTCGATGGATTCCGCAAGCACTGCCTGGTCAACGGTCTCGATGA
CATTGGCCTTACTCTGCAGATGGAGTCCAAGATCAAGAGCTTCGAGAACA
AGAGGACCATTGAGACCCCTTGGTTGGATGGCAGTGGCTACTTGAAGAGA
GGTAACCGCGGCGCTACTATGGTGCAGGCGGCGCCGGTGCCCAAGACGAA
CAGGGGCGACGTTAAGTCGGAGCCTTTGGAGTGGTAGAACATTCCCACCT
CCTCCCGCAAAAACTTCAAGAACGTCGATGAGTTCATCAAAGAGAACGAC
TCCCGCCTCCAATGCAGCACCCTCGAGGAGAACGTCAAGGACTTCGGTCT
CACATACTTTGGCATGGGCGACAAGCGCCAGGGTATTGTCCACATCATCG
GTCCTGAGCAGGGTTTCACCCTTCCCGGCACAACTGTCGTCTGCGGTGAC
AGTCACACCTCCACACACGGTGCCTTCGGTGCCCTTGCCTTCGGTATCGG
TACCAGTGAGGTCGAGCACGTTCTCGCCACCCAGACCCTCATCACCCGTC
GCAGCAAGAACATGCGCATCCAGGTCGACGGTGAGCTGCCCGCCGGTGTC
ACCAGTAAGGATGTCGTCCTCCACATCATCGGTGTCATTGGTACCGCCGG
AGGTACCGGTGCCGTTATTGAGTTCTGCGGTTCCGTCATTCGCAGCCTGA
GCATGGAGGCCCGTATGTCCATGTGCAACATGTCCATCGAAGCTGGTGCC
CGTGCCGGTATGATCGCTCCCGATCAGATCACCTTCGATTACCTGAAGGG
TCGCCCTCTTGCTCCCAAGGTCGACAGCCCCGAATGGACCAGGGCCGTCA
ACTTCTGGTCCAGCCTGGCCTCCGACGAAGATGCCGTCTACGACAAGACC
GTCATCATCGATGGCAAGGACATCATCCCCACCATGCCCGGCGCTGATAG
GAAACCCAAGACCTTGTATGACAAGGTCCTGGACCACCACATTGTCAACG
AGCAGGAAGATGGTACTCTTCTGATCTACATTGACAGACACCTTGTCCAC
GAAGTCACATCTCCCCAGGCTTTTGAGGGTCTCAAGAATGCTGGTCGTAA
AGTCCGCCGGCCGGACTGCACCCTGGTGACCGTTGACCACGACGTCATCC
CCATCAACGGCGTCGTTCCCGGCCCCGATGACTTCCAGGACGAGAGCCGC
AAGCTTGCCTGCAAGCGCGCTCTCGAATACATGGGCCTGACGGCCGGCAC
CCCCATGAAGGACATTACGGTCGACAAGGTTTTCATTGGCTCTTGCACCA
ACGCCCGTATCGAGGATCTCCGCGCCGCCGCCAAGGTTGTTCGCGGCAAG
AAGATCGCCTCCAACATCAAGCGTGCCATGGTCGTCCCCGGCTCTGGTCT
GGTTAAGCAACAAGCCGAGTCTGAAGGCCTCGACAAGATCTTTTCTGACG
CGGGCTTCGAATGGCGTGAGGCCGGCTGCTCCATGTGCCTGGGCATGAAC
CCCGACATTCTCTCTCCCCAGGAACGCTGCGCCAGTACCTCCAACCGTAA
CTTCGAGGGTCGCCAAGGTGCCGGCGGTCGCACTCACCTCATGTCCCCCG
CCATGGCCGCCTCCGCCGCCATCGTTGGCAAGCTGGCCGACGTGCGCGAG
CACATCACCACCAGCCCCGTCCTCGGCAAGGTGCAGCCCAAGATCGACGT
GCAAGAGGAACTGCACGAAGAGCCCACCACTGAAGATGAAGTCGAACGCA
TCATGGACCTCCCCGCCGACAACGAACCCCACACCAACTCCTCCGCCAGC
GCCACCTCCTCCGCTGGCCTGCCCAAATTCACCACCCTGAAGGGTATCGC
CGCTCCGATGGACCGCTCCAACGTCGACACCGACGCCATCATTCCCAAGC
AGTTCCTCAAGACCATCAAGCGCACCGGTCTTGGCAGCGCCCTGTTCTAC
GAGCTCCGCTACAAGGACGGCGCCGAGGACCCCTCTTTCATCCTGAACCA
AGGCATCTACCGCAACTCGAAGATCCTCGTCGTCACCGGCCCCAACTTCG
GCTGCGGTAGTTCCCGTGAACACGCCCCCTGGGCCCTCCTCGACTTCGGC
ATCAAGTGCATCATCGCCCCCTCCTTCGCCGATATCTTCTTCAACAACAC
CTTCAAGAACGGCATGTTGCCCGTCGTCATCAGCGACGAGGCCGTCCTGG
CCAAGATCGCCGCTGAGGCCCACGCCGGCCGCGAAGTCGAGGTCGATCTC
GTCAACCAGCAGATCAAGGACGCCGCTGGTAACAAGCTCGCCGACTTTGA
TGTCGATGGATTCCGCAAGCACTGCCTGGTCAACGGTCTCGATGACATTG
GCCTTACTCTGCAGATGGAGTCCAAGATCAAGAGCTTCGAGAACAAGAGG
ACCATTGAGACCCCTTGGTTGGATGGCAGTGGCTACTTGAAGAGAGGTAA
CCGCGGCGCTACTATGGTGCAGGCGGCGCCGGTGCCCAAGACGAACAGGG
GCGACGTTAAGTCGGAGCCTTTGGAGTGGTAGAACATTCCCACCTCCTCC
CGCAAAAACTTCAAGAACGTCGATGAGTTCATCAAAGAGAACGACTCCCG
CCTCCAATGCAGCACCCTCGAGGAGAACGTCAAGGACTTCGGTCTCACAT
ACTTTGGCATGGGCGACAAGCGCCAGGGTATTGTCCACATCATCGGTCCT
GAGCAGGGTTTCACCCTTCCCGGCACAACTGTCGTCTGCGGTGACAGTCA
CACCTCCACACACGGTGCCTTCGGTGCCCTTGCCTTCGGTATCGGTACCA
GTGAGGTCGAGCACGTTCTCGCCACCCAGACCCTCATCACCCGTCGCAGC
AAGAACATGCGCATCCAGGTCGACGGTGAGCTGCCCGCCGGTGTCACCAG
TAAGGATGTCGTCCTCCACATCATCGGTGTCATTGGTACCGCCGGAGGTA
CCGGTGCCGTTATTGAGTTCTGCGGTTCCGTCATTCGCAGCCTGAGCATG
GAGGCCCGTATGTCCATGTGCAACATGTCCATCGAAGCTGGTGCCCGTGC
CGGTATGATCGCTCCCGATCAGATCACCTTCGATTACCTGAAGGGTCGCC
CTCTTGCTCCCAAGGTCGACAGCCCCGAATGGACCAGGGCCGTCAACTTC
TGGTCCAGCCTGGCCTCCGACGAAGATGCCGTCTACGACAAGACCGTCAT
CATCGATGGCAAGGACATCATCCCCACCATGCCCGGCGCTGATAGGAAAC
CCAAGACCTTGTATGACAAGGTCCTGGACCACCACATTGTCAACGAGCAG
GAAGATGGTACTCTTCTGATCTACATTGACAGACACCTTGTCCACGAAGT
CACATCTCCCCAGGCTTTTGAGGGTCTCAAGAATGCTGGTCGTAAAGTCC
GCCGGCCGGACTGCACCCTGGTGACCGTTGACCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0009316 | 3-isopropylmalate dehydratase complex |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0009098 | leucine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003861 | 3-isopropylmalate dehydratase activity |
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260SL3 |
| DBxref | InterPro:IPR036008 |
| DBxref | InterPro:IPR033941 |
| DBxref | InterPro:IPR033940 |
| DBxref | InterPro:IPR018136 |
| DBxref | InterPro:IPR000573 |
| DBxref | InterPro:IPR015931 |
| DBxref | InterPro:IPR004431 |
| DBxref | InterPro:IPR015928 |
| DBxref | InterPro:IPR012235 |
| DBxref | InterPro:IPR004430 |
| DBxref | InterPro:IPR001030 |
| DBxref | PFAM:PF00694 |
| DBxref | PFAM:PF00330 |
| Product | 3-isopropylmalate dehydratase large subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| NKJJ01000020.1 | supercontig | NKJJ01000020.1:2920791..2923176 - |
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